RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 SSFA2P28290 1259 aa23.43■■□□□ 1.34
CMTM3-201ENST00000361909 NFE2L2Q16236 605 aa23.42■■□□□ 1.34
CMTM3-201ENST00000361909 NOB1Q9ULX3 412 aaKnown RBP23.42■■□□□ 1.34
CMTM3-201ENST00000361909 LNPKQ9C0E8 428 aa23.42■■□□□ 1.34
CMTM3-201ENST00000361909 RABEP1Q15276 862 aa23.41■■□□□ 1.34
CMTM3-201ENST00000361909 PHACTR3Q96KR7 559 aa23.41■■□□□ 1.34
CMTM3-201ENST00000361909 DYNC1I1O14576 645 aa23.41■■□□□ 1.34
CMTM3-201ENST00000361909 GCP02774 474 aa23.41■■□□□ 1.34
CMTM3-201ENST00000361909 SULT6B1Q6IMI4 303 aa23.41■■□□□ 1.34
CMTM3-201ENST00000361909 IP6K1Q92551 441 aa23.41■■□□□ 1.34
CMTM3-201ENST00000361909 TSR2Q969E8 191 aaKnown RBP23.41■■□□□ 1.34
CMTM3-201ENST00000361909 SLAIN2Q9P270 581 aa23.4■■□□□ 1.34
CMTM3-201ENST00000361909 KDRP35968 1356 aa23.4■■□□□ 1.34
CMTM3-201ENST00000361909 IGSF1Q8N6C5 1336 aa23.39■■□□□ 1.34
CMTM3-201ENST00000361909 PXDNQ92626 1479 aa23.39■■□□□ 1.33
CMTM3-201ENST00000361909 TBC1D9Q6ZT07 1266 aa23.39■■□□□ 1.33
CMTM3-201ENST00000361909 BRINP3Q76B58 766 aa23.39■■□□□ 1.33
CMTM3-201ENST00000361909 GAS2L2Q8NHY3 880 aa23.39■■□□□ 1.33
CMTM3-201ENST00000361909 CDC45O75419 566 aa23.38■■□□□ 1.33
CMTM3-201ENST00000361909 CD2BP2O95400 341 aaKnown RBP23.38■■□□□ 1.33
CMTM3-201ENST00000361909 CWC22Q9HCG8 908 aaKnown RBP23.38■■□□□ 1.33
CMTM3-201ENST00000361909 CYP2E1P05181 493 aaPredicted RBP23.37■■□□□ 1.33
CMTM3-201ENST00000361909 LMOD3Q0VAK6 560 aa23.37■■□□□ 1.33
CMTM3-201ENST00000361909 ZSCAN23Q3MJ62 389 aa23.37■■□□□ 1.33
CMTM3-201ENST00000361909 ZKSCAN5Q9Y2L8 839 aa23.37■■□□□ 1.33
CMTM3-201ENST00000361909 LMOD2Q6P5Q4 547 aa23.37■■□□□ 1.33
CMTM3-201ENST00000361909 ARHGEF25Q86VW2 580 aa23.37■■□□□ 1.33
CMTM3-201ENST00000361909 SMAP1Q8IYB5 467 aaPredicted RBP23.37■■□□□ 1.33
CMTM3-201ENST00000361909 TNS3Q68CZ2 1445 aa23.36■■□□□ 1.33
CMTM3-201ENST00000361909 AEBP1Q8IUX7 1158 aa23.36■■□□□ 1.33
CMTM3-201ENST00000361909 EYA1Q99502 592 aa23.36■■□□□ 1.33
CMTM3-201ENST00000361909 R3HCC1Q9Y3T6 440 aaKnown RBP23.35■■□□□ 1.33
CMTM3-201ENST00000361909 ARHGAP45Q92619 1136 aa23.34■■□□□ 1.33
CMTM3-201ENST00000361909 CCDC39Q9UFE4 941 aa23.34■■□□□ 1.33
CMTM3-201ENST00000361909 LMBRD1Q9NUN5 540 aa23.34■■□□□ 1.33
CMTM3-201ENST00000361909 PRDM4Q9UKN5 801 aa23.34■■□□□ 1.33
CMTM3-201ENST00000361909 SPATA31A3Q5VYP0 1347 aa23.34■■□□□ 1.33
CMTM3-201ENST00000361909 DLG5Q8TDM6 1919 aa23.33■■□□□ 1.33
CMTM3-201ENST00000361909 UQCRHLA0A096LP55 91 aa23.33■■□□□ 1.33
CMTM3-201ENST00000361909 UQCRHP07919 91 aa23.33■■□□□ 1.33
CMTM3-201ENST00000361909 DDX17Q92841 729 aaKnown RBP23.33■■□□□ 1.33
CMTM3-201ENST00000361909 MED1Q15648 1581 aaPredicted RBP23.32■■□□□ 1.32
CMTM3-201ENST00000361909 SASS6Q6UVJ0 657 aa23.32■■□□□ 1.32
CMTM3-201ENST00000361909 SOS2Q07890 1332 aaPredicted RBP23.31■■□□□ 1.32
CMTM3-201ENST00000361909 ANKRD45Q5TZF3 282 aa23.31■■□□□ 1.32
CMTM3-201ENST00000361909 MCTP1Q6DN14 999 aa23.31■■□□□ 1.32
CMTM3-201ENST00000361909 CAVIN1Q6NZI2 390 aaKnown RBP23.31■■□□□ 1.32
CMTM3-201ENST00000361909 FOXD4L1Q9NU39 408 aa23.3■■□□□ 1.32
CMTM3-201ENST00000361909 FAM13BQ9NYF5 915 aa23.3■■□□□ 1.32
CMTM3-201ENST00000361909 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.3■■□□□ 1.32
CMTM3-201ENST00000361909 RBSNQ9H1K0 784 aa23.28■■□□□ 1.32
CMTM3-201ENST00000361909 RBM10P98175 930 aaKnown RBP23.28■■□□□ 1.32
CMTM3-201ENST00000361909 AK9Q5TCS8 1911 aa23.27■■□□□ 1.32
CMTM3-201ENST00000361909 ZBTB7BO15156 539 aaPredicted RBP23.27■■□□□ 1.32
CMTM3-201ENST00000361909 LRSAM1Q6UWE0 723 aa23.27■■□□□ 1.32
CMTM3-201ENST00000361909 CRYBG1Q9Y4K1 1723 aa23.26■■□□□ 1.31
CMTM3-201ENST00000361909 MBD3O95983 291 aa23.26■■□□□ 1.31
CMTM3-201ENST00000361909 RBM42Q9BTD8 480 aaKnown RBP23.26■■□□□ 1.31
CMTM3-201ENST00000361909 LTBP4Q8N2S1 1624 aa23.26■■□□□ 1.31
CMTM3-201ENST00000361909 ABCC6O95255 1503 aa23.26■■□□□ 1.31
CMTM3-201ENST00000361909 IFT57Q9NWB7 429 aa23.25■■□□□ 1.31
CMTM3-201ENST00000361909 NHSL1Q5SYE7 1610 aa23.25■■□□□ 1.31
CMTM3-201ENST00000361909 LTV1Q96GA3 475 aaPredicted RBP23.25■■□□□ 1.31
CMTM3-201ENST00000361909 GNAI1P63096 354 aa23.24■■□□□ 1.31
CMTM3-201ENST00000361909 ST18O60284 1047 aa23.24■■□□□ 1.31
CMTM3-201ENST00000361909 ZNF853P0CG23 659 aa23.24■■□□□ 1.31
CMTM3-201ENST00000361909 PRIM1P49642 420 aaKnown RBP23.24■■□□□ 1.31
CMTM3-201ENST00000361909 NCLP19338 710 aaKnown RBP23.23■■□□□ 1.31
CMTM3-201ENST00000361909 NCAPD2Q15021 1401 aa23.22■■□□□ 1.31
CMTM3-201ENST00000361909 ABCC4O15439 1325 aa23.22■■□□□ 1.31
CMTM3-201ENST00000361909 HTATSF1O43719 755 aaKnown RBP23.22■■□□□ 1.31
CMTM3-201ENST00000361909 MTHFSDQ2M296 383 aaKnown RBP23.22■■□□□ 1.31
CMTM3-201ENST00000361909 INTS3Q68E01 1043 aaKnown RBP23.22■■□□□ 1.31
CMTM3-201ENST00000361909 CPDO75976 1380 aa23.22■■□□□ 1.31
CMTM3-201ENST00000361909 ZBTB7CA1YPR0 619 aa23.21■■□□□ 1.31
CMTM3-201ENST00000361909 UTP14CQ5TAP6 766 aaKnown RBP23.21■■□□□ 1.31
CMTM3-201ENST00000361909 NBPF6Q5VWK0 638 aa23.21■■□□□ 1.31
CMTM3-201ENST00000361909 NBPF4Q96M43 638 aa23.21■■□□□ 1.31
CMTM3-201ENST00000361909 CAMTA1Q9Y6Y1 1673 aa23.2■■□□□ 1.3
CMTM3-201ENST00000361909 COL18A1P39060 1754 aa23.2■■□□□ 1.3
CMTM3-201ENST00000361909 ZC3H6P61129 1189 aaKnown RBP23.2■■□□□ 1.3
CMTM3-201ENST00000361909 ANKRD24Q8TF21 1146 aa23.2■■□□□ 1.3
CMTM3-201ENST00000361909 CASC1Q6TDU7 716 aa23.19■■□□□ 1.3
CMTM3-201ENST00000361909 USP26Q9BXU7 913 aa23.19■■□□□ 1.3
CMTM3-201ENST00000361909 AXIN2Q9Y2T1 843 aa23.19■■□□□ 1.3
CMTM3-201ENST00000361909 FAM83GA6ND36 823 aa23.18■■□□□ 1.3
CMTM3-201ENST00000361909 GPT2Q8TD30 523 aa23.18■■□□□ 1.3
CMTM3-201ENST00000361909 THUMPD2Q9BTF0 503 aaKnown RBP23.18■■□□□ 1.3
CMTM3-201ENST00000361909 CCDC94Q9BW85 323 aaPredicted RBP23.18■■□□□ 1.3
CMTM3-201ENST00000361909 PLEKHG5O94827 1062 aa23.18■■□□□ 1.3
CMTM3-201ENST00000361909 KIAA2012Q0VF49 1180 aa23.18■■□□□ 1.3
CMTM3-201ENST00000361909 TTC22Q5TAA0 569 aa23.18■■□□□ 1.3
CMTM3-201ENST00000361909 RGPD2P0DJD1 1756 aa23.18■■□□□ 1.3
CMTM3-201ENST00000361909 MRPL50Q8N5N7 158 aaKnown RBP23.17■■□□□ 1.3
CMTM3-201ENST00000361909 PRIMPOLQ96LW4 560 aa23.17■■□□□ 1.3
CMTM3-201ENST00000361909 RGPD5Q99666 1765 aa23.17■■□□□ 1.3
CMTM3-201ENST00000361909 ERBB3P21860 1342 aa23.17■■□□□ 1.3
CMTM3-201ENST00000361909 GSPT1P15170 499 aaKnown RBP23.17■■□□□ 1.3
CMTM3-201ENST00000361909 SYAP1Q96A49 352 aaPredicted RBP23.17■■□□□ 1.3
CMTM3-201ENST00000361909 PRPF40AO75400 957 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms