RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 FKBP4Q02790 459 aaKnown RBP eCLIP19.44■□□□□ 0.7
SCAF1-201ENST00000360565 TMX4Q9H1E5 349 aaPredicted RBP19.44■□□□□ 0.7
SCAF1-201ENST00000360565 TNMDQ9H2S6 317 aa19.44■□□□□ 0.7
SCAF1-201ENST00000360565 HOOK1Q9UJC3 728 aaKnown RBP19.43■□□□□ 0.7
SCAF1-201ENST00000360565 MAST1Q9Y2H9 1570 aa19.43■□□□□ 0.7
SCAF1-201ENST00000360565 G3V3G9 751 aa19.43■□□□□ 0.7
SCAF1-201ENST00000360565 STK38Q15208 465 aa19.43■□□□□ 0.7
SCAF1-201ENST00000360565 DCAF8Q5TAQ9 597 aa19.43■□□□□ 0.7
SCAF1-201ENST00000360565 LARP1Q6PKG0 1096 aaKnown RBP19.43■□□□□ 0.7
SCAF1-201ENST00000360565 NAT10Q9H0A0 1025 aaKnown RBP19.43■□□□□ 0.7
SCAF1-201ENST00000360565 CEP126Q9P2H0 1117 aa19.43■□□□□ 0.7
SCAF1-201ENST00000360565 INSRP06213 1382 aa19.42■□□□□ 0.7
SCAF1-201ENST00000360565 AMOTQ4VCS5 1084 aa19.42■□□□□ 0.7
SCAF1-201ENST00000360565 GDPD2Q9HCC8 539 aa19.42■□□□□ 0.7
SCAF1-201ENST00000360565 CNNM1Q9NRU3 951 aa19.42■□□□□ 0.7
SCAF1-201ENST00000360565 TTC39AQ5SRH9 613 aa19.42■□□□□ 0.7
SCAF1-201ENST00000360565 KIF6Q6ZMV9 814 aa19.42■□□□□ 0.7
SCAF1-201ENST00000360565 ZSCAN30Q86W11 494 aa19.42■□□□□ 0.7
SCAF1-201ENST00000360565 TPM1P09493 284 aa19.42■□□□□ 0.7
SCAF1-201ENST00000360565 CCDC85AQ96PX6 553 aaPredicted RBP19.42■□□□□ 0.7
SCAF1-201ENST00000360565 TRIM35Q9UPQ4 493 aa19.42■□□□□ 0.7
SCAF1-201ENST00000360565 DHX16O60231 1041 aaKnown RBP19.42■□□□□ 0.7
SCAF1-201ENST00000360565 PDE1AP54750 535 aa19.42■□□□□ 0.7
SCAF1-201ENST00000360565 CCDC57Q2TAC2 916 aa19.42■□□□□ 0.7
SCAF1-201ENST00000360565 SPATA32Q96LK8 384 aa19.41■□□□□ 0.7
SCAF1-201ENST00000360565 TPM2P07951 284 aa19.41■□□□□ 0.7
SCAF1-201ENST00000360565 ME1P48163 572 aa19.41■□□□□ 0.7
SCAF1-201ENST00000360565 PTPRTO14522 1441 aa19.41■□□□□ 0.7
SCAF1-201ENST00000360565 TSR1Q2NL82 804 aaKnown RBP19.41■□□□□ 0.7
SCAF1-201ENST00000360565 DDX11Q96FC9 970 aa19.41■□□□□ 0.7
SCAF1-201ENST00000360565 PTCD1O75127 700 aaKnown RBP19.4■□□□□ 0.7
SCAF1-201ENST00000360565 RBM10P98175 930 aaKnown RBP19.4■□□□□ 0.7
SCAF1-201ENST00000360565 ZNF396Q96N95 335 aaPredicted RBP19.4■□□□□ 0.7
SCAF1-201ENST00000360565 RIMS2Q9UQ26 1411 aa19.4■□□□□ 0.7
SCAF1-201ENST00000360565 KRT32Q14532 448 aa19.4■□□□□ 0.7
SCAF1-201ENST00000360565 DCTPP1Q9H773 170 aa19.4■□□□□ 0.7
SCAF1-201ENST00000360565 RRP12Q5JTH9 1297 aaKnown RBP19.39■□□□□ 0.7
SCAF1-201ENST00000360565 MYD88Q99836 296 aa19.39■□□□□ 0.7
SCAF1-201ENST00000360565 TNRQ92752 1358 aa19.39■□□□□ 0.69
SCAF1-201ENST00000360565 CLSTN1O94985 981 aa19.39■□□□□ 0.69
SCAF1-201ENST00000360565 UHRF1BP1LA0JNW5 1464 aa19.39■□□□□ 0.69
SCAF1-201ENST00000360565 MAGI2Q86UL8 1455 aa19.39■□□□□ 0.69
SCAF1-201ENST00000360565 LIMCH1Q9UPQ0 1083 aa19.39■□□□□ 0.69
SCAF1-201ENST00000360565 ZBTB7BO15156 539 aaPredicted RBP19.39■□□□□ 0.69
SCAF1-201ENST00000360565 ECHDC1Q9NTX5 307 aa19.39■□□□□ 0.69
SCAF1-201ENST00000360565 MTHFSDQ2M296 383 aaKnown RBP19.38■□□□□ 0.69
SCAF1-201ENST00000360565 SNX21Q969T3 373 aa19.38■□□□□ 0.69
SCAF1-201ENST00000360565 NUP62CLQ9H1M0 184 aa19.38■□□□□ 0.69
SCAF1-201ENST00000360565 YTHDC2Q9H6S0 1430 aaKnown RBP19.38■□□□□ 0.69
SCAF1-201ENST00000360565 NPATQ14207 1427 aa19.38■□□□□ 0.69
SCAF1-201ENST00000360565 KLHL40Q2TBA0 621 aa19.37■□□□□ 0.69
SCAF1-201ENST00000360565 NOL10Q9BSC4 688 aaKnown RBP19.37■□□□□ 0.69
SCAF1-201ENST00000360565 XRCC6P12956 609 aaKnown RBP eCLIP19.37■□□□□ 0.69
SCAF1-201ENST00000360565 RHPN1Q8TCX5 695 aa19.37■□□□□ 0.69
SCAF1-201ENST00000360565 MAP3K2Q9Y2U5 619 aa19.37■□□□□ 0.69
SCAF1-201ENST00000360565 TMX3Q96JJ7 454 aa19.37■□□□□ 0.69
SCAF1-201ENST00000360565 PANK2Q9BZ23 570 aa19.37■□□□□ 0.69
SCAF1-201ENST00000360565 PIK3R4Q99570 1358 aa19.36■□□□□ 0.69
SCAF1-201ENST00000360565 ATP7AQ04656 1500 aa19.36■□□□□ 0.69
SCAF1-201ENST00000360565 SART3Q15020 963 aaKnown RBP19.36■□□□□ 0.69
SCAF1-201ENST00000360565 CEP85Q6P2H3 762 aa19.36■□□□□ 0.69
SCAF1-201ENST00000360565 HMGN5P82970 282 aaKnown RBP19.36■□□□□ 0.69
SCAF1-201ENST00000360565 AMOTL1Q8IY63 956 aa19.36■□□□□ 0.69
SCAF1-201ENST00000360565 CFAP65Q6ZU64 1925 aaKnown RBP19.36■□□□□ 0.69
SCAF1-201ENST00000360565 PLEKHM2Q8IWE5 1019 aa19.36■□□□□ 0.69
SCAF1-201ENST00000360565 SMC2O95347 1197 aa19.35■□□□□ 0.69
SCAF1-201ENST00000360565 HYPKQ9NX55 129 aa19.35■□□□□ 0.69
SCAF1-201ENST00000360565 ADGBQ8N7X0 1667 aa19.35■□□□□ 0.69
SCAF1-201ENST00000360565 KDM5CP41229 1560 aa19.35■□□□□ 0.69
SCAF1-201ENST00000360565 OLFM4Q6UX06 510 aa19.35■□□□□ 0.69
SCAF1-201ENST00000360565 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.35■□□□□ 0.692e-6■■■□□ 17.7
SCAF1-201ENST00000360565 ANKRD20A12PQ8NF67 263 aa19.35■□□□□ 0.69
SCAF1-201ENST00000360565 RBM27Q9P2N5 1060 aaKnown RBP19.35■□□□□ 0.69
SCAF1-201ENST00000360565 ABCC1P33527 1531 aa19.35■□□□□ 0.69
SCAF1-201ENST00000360565 TTC21AQ8NDW8 1320 aa19.34■□□□□ 0.69
SCAF1-201ENST00000360565 SH2B1Q9NRF2 756 aaPredicted RBP19.34■□□□□ 0.69
SCAF1-201ENST00000360565 CFAP45Q9UL16 551 aa19.34■□□□□ 0.69
SCAF1-201ENST00000360565 CAMK4Q16566 473 aa19.34■□□□□ 0.69
SCAF1-201ENST00000360565 VPS53Q5VIR6 699 aa19.34■□□□□ 0.69
SCAF1-201ENST00000360565 ARHGEF5Q12774 1597 aa19.34■□□□□ 0.69
SCAF1-201ENST00000360565 CHPF2Q9P2E5 772 aa19.33■□□□□ 0.69
SCAF1-201ENST00000360565 ZFYVE9O95405 1425 aa19.33■□□□□ 0.69
SCAF1-201ENST00000360565 STK11IPQ8N1F8 1099 aa19.33■□□□□ 0.68
SCAF1-201ENST00000360565 MAP7D2Q96T17 732 aa19.33■□□□□ 0.68
SCAF1-201ENST00000360565 ESYT1Q9BSJ8 1104 aa19.33■□□□□ 0.68
SCAF1-201ENST00000360565 A0A087WZG4 1122 aa19.32■□□□□ 0.68
SCAF1-201ENST00000360565 ATP8B2P98198 1209 aa19.32■□□□□ 0.68
SCAF1-201ENST00000360565 MAP3K11Q16584 847 aa19.32■□□□□ 0.68
SCAF1-201ENST00000360565 PDILTQ8N807 584 aa19.32■□□□□ 0.68
SCAF1-201ENST00000360565 RAD21O60216 631 aa19.32■□□□□ 0.68
SCAF1-201ENST00000360565 IL13P35225 146 aa19.32■□□□□ 0.68
SCAF1-201ENST00000360565 MTMR7Q9Y216 660 aa19.32■□□□□ 0.68
SCAF1-201ENST00000360565 XBP1P17861 261 aa19.32■□□□□ 0.68
SCAF1-201ENST00000360565 EYA1Q99502 592 aa19.32■□□□□ 0.68
SCAF1-201ENST00000360565 CTNNA3Q9UI47 895 aa19.32■□□□□ 0.68
SCAF1-201ENST00000360565 PDIA4P13667 645 aaKnown RBP19.31■□□□□ 0.68
SCAF1-201ENST00000360565 CCDC183Q5T5S1 534 aa19.31■□□□□ 0.68
SCAF1-201ENST00000360565 GOLGA6L1Q8N7Z2 621 aa19.31■□□□□ 0.68
SCAF1-201ENST00000360565 EVI5LQ96CN4 794 aa19.31■□□□□ 0.68
SCAF1-201ENST00000360565 PCMTD1Q96MG8 357 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms