RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 GOPCQ9HD26 462 aa6.86□□□□□ -1.31
DSC3-201ENST00000360428 ERICH3Q5RHP9 1530 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 FGD6Q6ZV73 1430 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 FAM114A1Q8IWE2 563 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 EHBP1Q8NDI1 1231 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 TUBB4BP68371 445 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 NSRP1Q9H0G5 558 aaKnown RBP6.85□□□□□ -1.31
DSC3-201ENST00000360428 CLIP2Q9UDT6 1046 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 GSTTP1A0A1W2PQM5 241 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 TNNT1P13805 278 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 FERP16591 822 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 GRIPAP1Q4V328 841 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 PPP4R3AQ6IN85 833 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 SREK1Q8WXA9 508 aaKnown RBP6.85□□□□□ -1.31
DSC3-201ENST00000360428 U3KPZ7 1027 aaPredicted RBP6.85□□□□□ -1.31
DSC3-201ENST00000360428 SYCE3A1L190 88 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 TDO2P48775 406 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 DAAM2Q86T65 1068 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 TATP17735 454 aaPredicted RBP6.85□□□□□ -1.31
DSC3-201ENST00000360428 TIGD1Q96MW7 591 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 DDX19AQ9NUU7 478 aaKnown RBP6.85□□□□□ -1.31
DSC3-201ENST00000360428 NLRP2Q9NX02 1062 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 HSF2BPO75031 334 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 ATP2B2Q01814 1243 aa6.85□□□□□ -1.31
DSC3-201ENST00000360428 CKAP4Q07065 602 aaKnown RBP6.85□□□□□ -1.31
DSC3-201ENST00000360428 BCCIPQ9P287 314 aaKnown RBP eCLIP6.85□□□□□ -1.31
DSC3-201ENST00000360428 TUBB4AP04350 444 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 SLC4A2P04920 1241 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 SSBP05455 408 aaKnown RBP eCLIP6.84□□□□□ -1.31
DSC3-201ENST00000360428 FERMT1Q9BQL6 677 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 EHMT1Q9H9B1 1298 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 SEC63Q9UGP8 760 aaKnown RBP6.84□□□□□ -1.31
DSC3-201ENST00000360428 CCDC171Q6TFL3 1326 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 HDGFL1Q5TGJ6 251 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 KANK3Q6NY19 840 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 AACSQ86V21 672 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 ZNF692Q9BU19 519 aaPredicted RBP6.84□□□□□ -1.31
DSC3-201ENST00000360428 GGNBP2Q9H3C7 697 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 PTPRGP23470 1445 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 FSD2A1L4K1 749 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 PRKAR2BP31323 418 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 CEP112Q8N8E3 955 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 TSNARE1Q96NA8 513 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 RAI14Q9P0K7 980 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 HFM1A2PYH4 1435 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 SPG7Q9UQ90 795 aa6.84□□□□□ -1.31
DSC3-201ENST00000360428 STX1AQ16623 288 aa6.84□□□□□ -1.32
DSC3-201ENST00000360428 TMEM266Q2M3C6 531 aa6.84□□□□□ -1.32
DSC3-201ENST00000360428 AKAP2Q9Y2D5 859 aa6.84□□□□□ -1.32
DSC3-201ENST00000360428 DHX29Q7Z478 1369 aaKnown RBP6.84□□□□□ -1.32
DSC3-201ENST00000360428 KDM5BQ9UGL1 1544 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 CASTP20810 708 aaKnown RBP6.83□□□□□ -1.32
DSC3-201ENST00000360428 HSPA4P34932 840 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 AMPD3Q01432 767 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 CCDC155Q8N6L0 562 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 DNAAF4Q8WXU2 420 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 MPHOSPH8Q99549 860 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 NUP88Q99567 741 aaPredicted RBP6.83□□□□□ -1.32
DSC3-201ENST00000360428 STMN4Q9H169 189 aaPredicted RBP6.83□□□□□ -1.32
DSC3-201ENST00000360428 GOLIM4O00461 696 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 CETN1Q12798 172 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 SPECC1Q5M775 1068 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 DDX23Q9BUQ8 820 aaKnown RBP6.83□□□□□ -1.32
DSC3-201ENST00000360428 C1orf115Q9H7X2 142 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 CC2D2AQ9P2K1 1620 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 DCAF8L1A6NGE4 600 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 GPATCH11Q8N954 259 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 LRRC27Q9C0I9 530 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 A0A087WZG4 1122 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 UBE4AQ14139 1066 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 NBPF1Q3BBV0 1214 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 CCDC172P0C7W6 258 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 GTF2A1P52655 376 aaPredicted RBP6.83□□□□□ -1.32
DSC3-201ENST00000360428 CABP4P57796 275 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 NLRP6P59044 892 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 STXBP4Q6ZWJ1 553 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 DDX46Q7L014 1031 aaKnown RBP6.83□□□□□ -1.32
DSC3-201ENST00000360428 DHX37Q8IY37 1157 aaKnown RBP6.83□□□□□ -1.32
DSC3-201ENST00000360428 CABP2Q9NPB3 220 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 HOMER2Q9NSB8 354 aa6.83□□□□□ -1.32
DSC3-201ENST00000360428 ANKRD30BQ9BXX2 1392 aa6.82□□□□□ -1.32
DSC3-201ENST00000360428 SNW1Q13573 536 aaKnown RBP6.82□□□□□ -1.32
DSC3-201ENST00000360428 CWC27Q6UX04 472 aaKnown RBP6.82□□□□□ -1.32
DSC3-201ENST00000360428 LRRC45Q96CN5 670 aa6.82□□□□□ -1.32
DSC3-201ENST00000360428 FERMT2Q96AC1 680 aa6.82□□□□□ -1.32
DSC3-201ENST00000360428 KIF1BPQ96EK5 621 aa6.82□□□□□ -1.32
DSC3-201ENST00000360428 TTC12Q9H892 705 aaPredicted RBP6.82□□□□□ -1.32
DSC3-201ENST00000360428 CEP126Q9P2H0 1117 aa6.82□□□□□ -1.32
DSC3-201ENST00000360428 DENND4BO75064 1496 aaPredicted RBP6.82□□□□□ -1.32
DSC3-201ENST00000360428 GLRX3O76003 335 aaKnown RBP6.82□□□□□ -1.32
DSC3-201ENST00000360428 PPP4R3BQ5MIZ7 849 aa6.82□□□□□ -1.32
DSC3-201ENST00000360428 OPA1O60313 960 aa6.82□□□□□ -1.32
DSC3-201ENST00000360428 FKBP4Q02790 459 aaKnown RBP eCLIP6.82□□□□□ -1.32
DSC3-201ENST00000360428 CEP135Q66GS9 1140 aa6.82□□□□□ -1.32
DSC3-201ENST00000360428 PLVAPQ9BX97 442 aa6.82□□□□□ -1.32
DSC3-201ENST00000360428 ANKRD50Q9ULJ7 1429 aa6.82□□□□□ -1.32
DSC3-201ENST00000360428 OSCARQ8IYS5 282 aa6.82□□□□□ -1.32
DSC3-201ENST00000360428 CADPSQ9ULU8 1353 aa6.82□□□□□ -1.32
DSC3-201ENST00000360428 LRRC9Q6ZRR7 1453 aa6.81□□□□□ -1.32
DSC3-201ENST00000360428 CTNNA2P26232 953 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms