RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ATP6V1DQ9Y5K8 247 aa7.9□□□□□ -1.14
CSDE1-203ENST00000358528 PNMA6EA0A0J9YXQ4 647 aa7.9□□□□□ -1.14
CSDE1-203ENST00000358528 IFIT2P09913 472 aaKnown RBP7.9□□□□□ -1.14
CSDE1-203ENST00000358528 CEBPZQ03701 1054 aaKnown RBP7.9□□□□□ -1.14
CSDE1-203ENST00000358528 RIMS2Q9UQ26 1411 aa7.9□□□□□ -1.14
CSDE1-203ENST00000358528 QRICH2Q9H0J4 1663 aa7.9□□□□□ -1.15
CSDE1-203ENST00000358528 SHROOM2Q13796 1616 aa7.9□□□□□ -1.15
CSDE1-203ENST00000358528 HDGFP51858 240 aaKnown RBP7.9□□□□□ -1.15
CSDE1-203ENST00000358528 AIMP1Q12904 312 aaKnown RBP7.9□□□□□ -1.15
CSDE1-203ENST00000358528 JARID2Q92833 1246 aaPredicted RBP7.9□□□□□ -1.15
CSDE1-203ENST00000358528 TCEANC2Q96MN5 208 aa7.9□□□□□ -1.15
CSDE1-203ENST00000358528 MAP7D2Q96T17 732 aa7.9□□□□□ -1.15
CSDE1-203ENST00000358528 CNTROBQ8N137 903 aa7.89□□□□□ -1.15
CSDE1-203ENST00000358528 BICD2Q8TD16 824 aa7.89□□□□□ -1.15
CSDE1-203ENST00000358528 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-203ENST00000358528 GOLGA6L6A8MZA4 724 aa7.89□□□□□ -1.15
CSDE1-203ENST00000358528 PTPRCP08575 1304 aa7.89□□□□□ -1.15
CSDE1-203ENST00000358528 ZKSCAN1P17029 563 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-203ENST00000358528 CHMLP26374 656 aa7.89□□□□□ -1.15
CSDE1-203ENST00000358528 FAM69CQ0P6D2 419 aa7.89□□□□□ -1.15
CSDE1-203ENST00000358528 ZRSR1Q15695 479 aaKnown RBP7.89□□□□□ -1.15
CSDE1-203ENST00000358528 NCBP3Q53F19 620 aaKnown RBP7.89□□□□□ -1.15
CSDE1-203ENST00000358528 PRPF40BQ6NWY9 871 aaKnown RBP7.89□□□□□ -1.15
CSDE1-203ENST00000358528 OSCARQ8IYS5 282 aa7.89□□□□□ -1.15
CSDE1-203ENST00000358528 NECAB1Q8N987 351 aa7.89□□□□□ -1.15
CSDE1-203ENST00000358528 SIL1Q9H173 461 aa7.89□□□□□ -1.15
CSDE1-203ENST00000358528 ZDHHC9Q9Y397 364 aa7.89□□□□□ -1.15
CSDE1-203ENST00000358528 SPDYE4A6NLX3 237 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 MTHFSDQ2M296 383 aaKnown RBP7.88□□□□□ -1.15
CSDE1-203ENST00000358528 UNC5CLQ8IV45 518 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 CKAP2LQ8IYA6 745 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 RTL1A6NKG5 1358 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 TEFQ10587 303 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 PPP1R42Q7Z4L9 355 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 PPFIA3O75145 1194 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 CCDC183Q5T5S1 534 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 GPATCH3Q96I76 525 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 TRIM5Q9C035 493 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 SRCIN1Q9C0H9 1055 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 TFIP11Q9UBB9 837 aaKnown RBP7.88□□□□□ -1.15
CSDE1-203ENST00000358528 TULP4Q9NRJ4 1543 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 STX6O43752 255 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 IGSF3O75054 1194 aa7.88□□□□□ -1.15
CSDE1-203ENST00000358528 LARP1BQ659C4 914 aaKnown RBP7.88□□□□□ -1.15
CSDE1-203ENST00000358528 CLASRPQ8N2M8 674 aaKnown RBP7.88□□□□□ -1.15
CSDE1-203ENST00000358528 EFCAB6Q5THR3 1501 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 ACEP12821 1306 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 H3BQV1 296 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 NPHP1O15259 732 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 DNM1Q05193 864 aaKnown RBP7.87□□□□□ -1.15
CSDE1-203ENST00000358528 NOLC1Q14978 699 aaKnown RBP eCLIP7.87□□□□□ -1.152e-7■□□□□ 10.8
CSDE1-203ENST00000358528 IFFO2Q5TF58 517 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 FAM173BQ6P4H8 233 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 RUFY2Q8WXA3 655 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 PDRG1Q9NUG6 133 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 ZFYVE9O95405 1425 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 CHL1O00533 1208 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 ZNF853P0CG23 659 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 TAF7Q15545 349 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-203ENST00000358528 POGZQ7Z3K3 1410 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 GJB2P29033 226 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 AK2P54819 239 aa7.87□□□□□ -1.15
CSDE1-203ENST00000358528 NCOA3Q9Y6Q9 1424 aa7.86□□□□□ -1.15
CSDE1-203ENST00000358528 DYNC1I1O14576 645 aa7.86□□□□□ -1.15
CSDE1-203ENST00000358528 BRD1O95696 1058 aa7.86□□□□□ -1.15
CSDE1-203ENST00000358528 PHAXQ9H814 394 aaKnown RBP7.86□□□□□ -1.15
CSDE1-203ENST00000358528 KIF3AQ9Y496 699 aa7.86□□□□□ -1.15
CSDE1-203ENST00000358528 CYP46A1Q9Y6A2 500 aa7.86□□□□□ -1.15
CSDE1-203ENST00000358528 A0A0U1RQG5 324 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-203ENST00000358528 LIMCH1Q9UPQ0 1083 aa7.86□□□□□ -1.15
CSDE1-203ENST00000358528 VIRMAQ69YN4 1812 aaKnown RBP7.86□□□□□ -1.15
CSDE1-203ENST00000358528 FAM135BQ49AJ0 1406 aa7.86□□□□□ -1.15
CSDE1-203ENST00000358528 GLI2P10070 1586 aa7.86□□□□□ -1.15
CSDE1-203ENST00000358528 ZSCAN22P10073 491 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-203ENST00000358528 HMGN5P82970 282 aaKnown RBP7.86□□□□□ -1.15
CSDE1-203ENST00000358528 HS1BP3Q53T59 392 aa7.86□□□□□ -1.15
CSDE1-203ENST00000358528 FSD1Q9BTV5 496 aa7.86□□□□□ -1.15
CSDE1-203ENST00000358528 LRRC7Q96NW7 1537 aa7.86□□□□□ -1.15
CSDE1-203ENST00000358528 SHPRHQ149N8 1683 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 GOLGA6L19H0YKK7 550 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 CCDC192P0DO97 292 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 SYT1P21579 422 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 BRPF1P55201 1214 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-203ENST00000358528 ATP8B2P98198 1209 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 PPP4R3BQ5MIZ7 849 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 ABTB2Q8N961 1025 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 FAM184AQ8NB25 1140 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 TTC21BQ7Z4L5 1316 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 GNAT3A8MTJ3 354 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 BECN2A8MW95 431 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 MTERF4Q7Z6M4 381 aaKnown RBP7.85□□□□□ -1.15
CSDE1-203ENST00000358528 AACSQ86V21 672 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 RHPN1Q8TCX5 695 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 RBM33Q96EV2 1170 aaKnown RBP7.85□□□□□ -1.15
CSDE1-203ENST00000358528 DDX11Q96FC9 970 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 C16orf45Q96MC5 204 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-203ENST00000358528 CCDC8Q9H0W5 538 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-203ENST00000358528 TNMDQ9H2S6 317 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 PTCH1Q13635 1447 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 MCM5P33992 734 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms