RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 HAP1P54257 671 aaPredicted RBP17.33■□□□□ 0.36
PGBD2-202ENST00000355360 L1TD1Q5T7N2 865 aaKnown RBP17.33■□□□□ 0.36
PGBD2-202ENST00000355360 KCNQ3O43525 872 aa17.32■□□□□ 0.36
PGBD2-202ENST00000355360 GNAI2P04899 355 aa17.32■□□□□ 0.36
PGBD2-202ENST00000355360 LRRC59Q96AG4 307 aaKnown RBP17.32■□□□□ 0.36
PGBD2-202ENST00000355360 LGR6Q9HBX8 967 aa17.32■□□□□ 0.36
PGBD2-202ENST00000355360 RILPL2Q969X0 211 aa17.32■□□□□ 0.36
PGBD2-202ENST00000355360 UNC5CLQ8IV45 518 aa17.31■□□□□ 0.36
PGBD2-202ENST00000355360 THEMISQ8N1K5 641 aaPredicted RBP17.31■□□□□ 0.36
PGBD2-202ENST00000355360 TRIM6-TRIM34B2RNG4 842 aa17.3■□□□□ 0.36
PGBD2-202ENST00000355360 CCT4P50991 539 aaKnown RBP17.3■□□□□ 0.36
PGBD2-202ENST00000355360 HMMRO75330 724 aa17.3■□□□□ 0.36
PGBD2-202ENST00000355360 GBP4Q96PP9 640 aa17.3■□□□□ 0.36
PGBD2-202ENST00000355360 CCDC30Q5VVM6 783 aa17.29■□□□□ 0.36
PGBD2-202ENST00000355360 NBPF6Q5VWK0 638 aa17.29■□□□□ 0.36
PGBD2-202ENST00000355360 LMOD2Q6P5Q4 547 aa17.29■□□□□ 0.36
PGBD2-202ENST00000355360 NBPF4Q96M43 638 aa17.29■□□□□ 0.36
PGBD2-202ENST00000355360 RABEP1Q15276 862 aa17.29■□□□□ 0.36
PGBD2-202ENST00000355360 HDGFL1Q5TGJ6 251 aa17.29■□□□□ 0.36
PGBD2-202ENST00000355360 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
PGBD2-202ENST00000355360 MCTP1Q6DN14 999 aa17.28■□□□□ 0.36
PGBD2-202ENST00000355360 IL25Q9H293 177 aa17.28■□□□□ 0.36
PGBD2-202ENST00000355360 PALD1Q9ULE6 856 aa17.28■□□□□ 0.36
PGBD2-202ENST00000355360 USP44Q9H0E7 712 aa17.28■□□□□ 0.36
PGBD2-202ENST00000355360 GRPEL1Q9HAV7 217 aa17.28■□□□□ 0.36
PGBD2-202ENST00000355360 DTNBO60941 627 aa17.27■□□□□ 0.36
PGBD2-202ENST00000355360 CIZ1Q9ULV3 898 aaPredicted RBP17.27■□□□□ 0.36
PGBD2-202ENST00000355360 MAP3K5Q99683 1374 aa17.27■□□□□ 0.36
PGBD2-202ENST00000355360 BAG4O95429 457 aaKnown RBP17.27■□□□□ 0.36
PGBD2-202ENST00000355360 TAF7Q15545 349 aaPredicted RBP17.27■□□□□ 0.36
PGBD2-202ENST00000355360 LRRCC1Q9C099 1032 aa17.27■□□□□ 0.36
PGBD2-202ENST00000355360 NWD1Q149M9 1564 aa17.27■□□□□ 0.35
PGBD2-202ENST00000355360 ERC2O15083 957 aa17.26■□□□□ 0.35
PGBD2-202ENST00000355360 NCLP19338 710 aaKnown RBP17.26■□□□□ 0.35
PGBD2-202ENST00000355360 ESCO1Q5FWF5 840 aa17.26■□□□□ 0.35
PGBD2-202ENST00000355360 MARF1Q9Y4F3 1742 aaKnown RBP17.26■□□□□ 0.35
PGBD2-202ENST00000355360 ARHGAP23Q9P227 1491 aa17.26■□□□□ 0.35
PGBD2-202ENST00000355360 CASC1Q6TDU7 716 aa17.26■□□□□ 0.35
PGBD2-202ENST00000355360 MPRIPQ6WCQ1 1025 aa17.26■□□□□ 0.35
PGBD2-202ENST00000355360 SLIT1O75093 1534 aa17.26■□□□□ 0.35
PGBD2-202ENST00000355360 MX1P20591 662 aa17.26■□□□□ 0.35
PGBD2-202ENST00000355360 FAM43AQ8N2R8 423 aa17.26■□□□□ 0.35
PGBD2-202ENST00000355360 PHF8Q9UPP1 1060 aa17.26■□□□□ 0.35
PGBD2-202ENST00000355360 FER1L4A9Z1Z3 1794 aa17.25■□□□□ 0.35
PGBD2-202ENST00000355360 NBPF7P0C2Y1 421 aaPredicted RBP17.25■□□□□ 0.35
PGBD2-202ENST00000355360 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
PGBD2-202ENST00000355360 NEK4P51957 841 aa17.25■□□□□ 0.35
PGBD2-202ENST00000355360 FOXD4L6Q3SYB3 417 aaPredicted RBP17.25■□□□□ 0.35
PGBD2-202ENST00000355360 FOXD4L3Q6VB84 417 aaPredicted RBP17.25■□□□□ 0.35
PGBD2-202ENST00000355360 ANO2Q9NQ90 1003 aa17.25■□□□□ 0.35
PGBD2-202ENST00000355360 CHPF2Q9P2E5 772 aa17.25■□□□□ 0.35
PGBD2-202ENST00000355360 FAM208AQ9UK61 1670 aaKnown RBP17.24■□□□□ 0.35
PGBD2-202ENST00000355360 EIF5BO60841 1220 aaKnown RBP17.24■□□□□ 0.35
PGBD2-202ENST00000355360 DDX49Q9Y6V7 483 aaKnown RBP17.24■□□□□ 0.35
PGBD2-202ENST00000355360 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
PGBD2-202ENST00000355360 UBTFL1P0CB47 393 aaPredicted RBP17.24■□□□□ 0.35
PGBD2-202ENST00000355360 ATP8B2P98198 1209 aa17.24■□□□□ 0.35
PGBD2-202ENST00000355360 UPF3BQ9BZI7 483 aaKnown RBP17.24■□□□□ 0.35
PGBD2-202ENST00000355360 RGPD2P0DJD1 1756 aa17.24■□□□□ 0.35
PGBD2-202ENST00000355360 SALL3Q9BXA9 1300 aa17.23■□□□□ 0.35
PGBD2-202ENST00000355360 XRN1Q8IZH2 1706 aaKnown RBP17.23■□□□□ 0.35
PGBD2-202ENST00000355360 REC8O95072 547 aa17.22■□□□□ 0.35
PGBD2-202ENST00000355360 LARP6Q9BRS8 491 aaKnown RBP17.22■□□□□ 0.35
PGBD2-202ENST00000355360 SURF6O75683 361 aaKnown RBP17.22■□□□□ 0.35
PGBD2-202ENST00000355360 GNAI3P08754 354 aa17.22■□□□□ 0.35
PGBD2-202ENST00000355360 PSME1Q06323 249 aa17.22■□□□□ 0.35
PGBD2-202ENST00000355360 PPP1R42Q7Z4L9 355 aa17.22■□□□□ 0.35
PGBD2-202ENST00000355360 ORAI2Q96SN7 254 aa17.22■□□□□ 0.35
PGBD2-202ENST00000355360 PI4KAP2A4QPH2 592 aa17.22■□□□□ 0.35
PGBD2-202ENST00000355360 MRE11P49959 708 aa17.22■□□□□ 0.35
PGBD2-202ENST00000355360 PI4KAP1Q8N8J0 262 aa17.22■□□□□ 0.35
PGBD2-202ENST00000355360 ESYT1Q9BSJ8 1104 aa17.22■□□□□ 0.35
PGBD2-202ENST00000355360 ZDHHC9Q9Y397 364 aa17.22■□□□□ 0.35
PGBD2-202ENST00000355360 LTN1O94822 1766 aa17.21■□□□□ 0.35
PGBD2-202ENST00000355360 TPRNQ4KMQ1 711 aa17.21■□□□□ 0.35
PGBD2-202ENST00000355360 ST18O60284 1047 aa17.21■□□□□ 0.35
PGBD2-202ENST00000355360 CAVIN1Q6NZI2 390 aaKnown RBP17.2■□□□□ 0.34
PGBD2-202ENST00000355360 OSBPL3Q9H4L5 887 aa17.2■□□□□ 0.34
PGBD2-202ENST00000355360 RBM27Q9P2N5 1060 aaKnown RBP17.2■□□□□ 0.34
PGBD2-202ENST00000355360 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
PGBD2-202ENST00000355360 CHMLP26374 656 aa17.2■□□□□ 0.34
PGBD2-202ENST00000355360 SRGAP3O43295 1099 aa17.19■□□□□ 0.34
PGBD2-202ENST00000355360 SOS1Q07889 1333 aaPredicted RBP17.19■□□□□ 0.34
PGBD2-202ENST00000355360 LRRC37A3O60309 1634 aa17.19■□□□□ 0.34
PGBD2-202ENST00000355360 PROSER3Q2NL68 480 aa17.19■□□□□ 0.34
PGBD2-202ENST00000355360 ZNF530Q6P9A1 599 aaPredicted RBP17.19■□□□□ 0.34
PGBD2-202ENST00000355360 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
PGBD2-202ENST00000355360 PRPF40AO75400 957 aaKnown RBP17.18■□□□□ 0.34
PGBD2-202ENST00000355360 EIF4A1P60842 406 aaKnown RBP17.18■□□□□ 0.34
PGBD2-202ENST00000355360 HTATSF1O43719 755 aaKnown RBP17.18■□□□□ 0.34
PGBD2-202ENST00000355360 TMX3Q96JJ7 454 aa17.18■□□□□ 0.34
PGBD2-202ENST00000355360 NSFL1CQ9UNZ2 370 aaKnown RBP17.18■□□□□ 0.34
PGBD2-202ENST00000355360 IP6K1Q92551 441 aa17.18■□□□□ 0.34
PGBD2-202ENST00000355360 SRCIN1Q9C0H9 1055 aa17.18■□□□□ 0.34
PGBD2-202ENST00000355360 BTBD11A6QL63 1104 aa17.17■□□□□ 0.34
PGBD2-202ENST00000355360 GOLGA6L22H0YM25 854 aa17.17■□□□□ 0.34
PGBD2-202ENST00000355360 TEFQ10587 303 aa17.17■□□□□ 0.34
PGBD2-202ENST00000355360 CYP2E1P05181 493 aaPredicted RBP17.16■□□□□ 0.34
PGBD2-202ENST00000355360 LMBRD1Q9NUN5 540 aa17.16■□□□□ 0.34
PGBD2-202ENST00000355360 PA2G4Q9UQ80 394 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms