RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 ANKRD62A6NC57 917 aa7.6□□□□□ -1.19
TTC3-201ENST00000354749 SMC1AQ14683 1233 aaKnown RBP7.6□□□□□ -1.19
TTC3-201ENST00000354749 SEPT11Q9NVA2 429 aaKnown RBP7.6□□□□□ -1.19
TTC3-201ENST00000354749 HMGB1P09429 215 aaKnown RBP7.59□□□□□ -1.19
TTC3-201ENST00000354749 SSFA2P28290 1259 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 RARSP54136 660 aaKnown RBP7.59□□□□□ -1.19
TTC3-201ENST00000354749 BMP2KLQ5H9B9 411 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 RTEL1-TNFRSF6BF6WH68 1400 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 FKBP15Q5T1M5 1219 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 LUZP1Q86V48 1076 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 UVSSAQ2YD98 709 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 LIMCH1Q9UPQ0 1083 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 USP25Q9UHP3 1055 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 DESP17661 470 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 TDO2P48775 406 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 KIF1BPQ96EK5 621 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 ALS2CR12Q96Q35 445 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 PAXBP1Q9Y5B6 917 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 TNNT1P13805 278 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 CCDC91Q7Z6B0 441 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 PRDM10Q9NQV6 1147 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 CABP1Q9NZU7 370 aa7.59□□□□□ -1.19
TTC3-201ENST00000354749 TATP17735 454 aaPredicted RBP7.59□□□□□ -1.2
TTC3-201ENST00000354749 EHBP1Q8NDI1 1231 aa7.59□□□□□ -1.2
TTC3-201ENST00000354749 NAIPQ13075 1403 aa7.59□□□□□ -1.2
TTC3-201ENST00000354749 NCAPD3P42695 1498 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 YEATS4O95619 227 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 CCDC150Q8NCX0 1101 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 AIDAQ96BJ3 306 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 PPP4R3BQ5MIZ7 849 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 WWC2Q6AWC2 1192 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 FKBP4Q02790 459 aaKnown RBP eCLIP7.58□□□□□ -1.2
TTC3-201ENST00000354749 CDK19Q9BWU1 502 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 ZHX3Q9H4I2 956 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 TMPOP42166 694 aaKnown RBP7.58□□□□□ -1.2
TTC3-201ENST00000354749 IL1RAPL2Q9NP60 686 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 CCDC196A0A1B0GTZ2 297 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 KIF4BQ2VIQ3 1234 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 CEP126Q9P2H0 1117 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 CLCN1P35523 988 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 CCDC184Q52MB2 194 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 SSH1Q8WYL5 1049 aa7.58□□□□□ -1.2
TTC3-201ENST00000354749 CETN2P41208 172 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 SMARCC1Q92922 1105 aaPredicted RBP7.57□□□□□ -1.2
TTC3-201ENST00000354749 EXOC6BQ9Y2D4 811 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 ADCY5O95622 1261 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 NUTM1Q86Y26 1132 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 UBE2Q2Q8WVN8 375 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 MPHOSPH8Q99549 860 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 SPG7Q9UQ90 795 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 NCOA1Q15788 1441 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 CCDC171Q6TFL3 1326 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 POTEJP0CG39 1038 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 SLC52A1Q9NWF4 448 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 AQRO60306 1485 aaKnown RBP eCLIP7.57□□□□□ -1.21e-7■■■■□ 25.7
TTC3-201ENST00000354749 URI1O94763 535 aaPredicted RBP7.57□□□□□ -1.2
TTC3-201ENST00000354749 SSBP05455 408 aaKnown RBP eCLIP7.57□□□□□ -1.2
TTC3-201ENST00000354749 KRT222Q8N1A0 295 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 NSD2O96028 1365 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 TBC1D32Q96NH3 1257 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 NUP88Q99567 741 aaPredicted RBP7.57□□□□□ -1.2
TTC3-201ENST00000354749 GOLGA6L10A0A0M3HER8 536 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 C8orf76Q96K31 380 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 GCOM1H8Y6P7 765 aaPredicted RBP7.57□□□□□ -1.2
TTC3-201ENST00000354749 TUBB4AP04350 444 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 MYZAPP0CAP1 466 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 BMS1Q14692 1282 aaKnown RBP7.57□□□□□ -1.2
TTC3-201ENST00000354749 C20orf194Q5TEA3 1177 aa7.57□□□□□ -1.2
TTC3-201ENST00000354749 GTF2F1P35269 517 aaKnown RBP eCLIP7.56□□□□□ -1.25e-13■■■■□ 20.3
TTC3-201ENST00000354749 IFFO1Q0D2I5 559 aa7.56□□□□□ -1.2
TTC3-201ENST00000354749 CKAP2LQ8IYA6 745 aa7.56□□□□□ -1.2
TTC3-201ENST00000354749 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.56□□□□□ -1.2
TTC3-201ENST00000354749 USO1O60763 962 aaKnown RBP7.56□□□□□ -1.2
TTC3-201ENST00000354749 MAP2K1Q02750 393 aaPredicted RBP7.56□□□□□ -1.2
TTC3-201ENST00000354749 SNW1Q13573 536 aaKnown RBP7.56□□□□□ -1.2
TTC3-201ENST00000354749 MAPK8IP2Q13387 824 aaPredicted RBP7.56□□□□□ -1.2
TTC3-201ENST00000354749 TSG101Q99816 390 aa7.56□□□□□ -1.2
TTC3-201ENST00000354749 STX6O43752 255 aa7.56□□□□□ -1.2
TTC3-201ENST00000354749 FGFR1OPO95684 399 aaKnown RBP7.56□□□□□ -1.2
TTC3-201ENST00000354749 FAM135AQ9P2D6 1515 aa7.56□□□□□ -1.2
TTC3-201ENST00000354749 KIF20AO95235 890 aa7.56□□□□□ -1.2
TTC3-201ENST00000354749 UBE2HP62256 183 aa7.56□□□□□ -1.2
TTC3-201ENST00000354749 NAA15Q9BXJ9 866 aaKnown RBP7.56□□□□□ -1.2
TTC3-201ENST00000354749 CABP4P57796 275 aa7.56□□□□□ -1.2
TTC3-201ENST00000354749 CTR9Q6PD62 1173 aa7.56□□□□□ -1.2
TTC3-201ENST00000354749 BAG4O95429 457 aaKnown RBP7.56□□□□□ -1.2
TTC3-201ENST00000354749 BTBD11A6QL63 1104 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 AFAP1Q8N556 730 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 PAF1Q8N7H5 531 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 RBM42Q9BTD8 480 aaKnown RBP7.55□□□□□ -1.2
TTC3-201ENST00000354749 RALGAPBQ86X10 1494 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 CCDC175P0C221 793 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 ZSCAN23Q3MJ62 389 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 AKAP2Q9Y2D5 859 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 HS1BP3Q53T59 392 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 TIGD1Q96MW7 591 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 SEC63Q9UGP8 760 aaKnown RBP7.55□□□□□ -1.2
TTC3-201ENST00000354749 GIGYF2Q6Y7W6 1299 aaKnown RBP7.55□□□□□ -1.2
TTC3-201ENST00000354749 ZNF287Q9HBT7 754 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 IVLP07476 585 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms