RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 LRP2BPQ9P2M1 347 aa18.87■□□□□ 0.61
PTPN11-201ENST00000351677 IMMTQ16891 758 aaKnown RBP18.87■□□□□ 0.61
PTPN11-201ENST00000351677 METTL24Q5JXM2 366 aa18.87■□□□□ 0.61
PTPN11-201ENST00000351677 TBC1D9Q6ZT07 1266 aa18.87■□□□□ 0.61
PTPN11-201ENST00000351677 FANCAO15360 1455 aa18.87■□□□□ 0.61
PTPN11-201ENST00000351677 FLIIQ13045 1269 aa18.87■□□□□ 0.61
PTPN11-201ENST00000351677 CCAR1Q8IX12 1150 aaKnown RBP18.87■□□□□ 0.61
PTPN11-201ENST00000351677 FILIP1Q7Z7B0 1213 aa18.86■□□□□ 0.61
PTPN11-201ENST00000351677 TNPO1Q92973 898 aaKnown RBP18.86■□□□□ 0.61
PTPN11-201ENST00000351677 CEBPAP49715 358 aaPredicted RBP18.86■□□□□ 0.61
PTPN11-201ENST00000351677 PPFIBP1Q86W92 1011 aa18.86■□□□□ 0.61
PTPN11-201ENST00000351677 FOXO3O43524 673 aa18.86■□□□□ 0.61
PTPN11-201ENST00000351677 MAP3K11Q16584 847 aa18.85■□□□□ 0.61
PTPN11-201ENST00000351677 TSHZ3Q63HK5 1081 aa18.85■□□□□ 0.61
PTPN11-201ENST00000351677 AIDAQ96BJ3 306 aa18.85■□□□□ 0.61
PTPN11-201ENST00000351677 NSD2O96028 1365 aa18.85■□□□□ 0.61
PTPN11-201ENST00000351677 PIP4K2AP48426 406 aaPredicted RBP18.85■□□□□ 0.61
PTPN11-201ENST00000351677 CEP57L1Q8IYX8 460 aa18.85■□□□□ 0.61
PTPN11-201ENST00000351677 DACH1Q9UI36 760 aa18.85■□□□□ 0.61
PTPN11-201ENST00000351677 PHF8Q9UPP1 1060 aa18.85■□□□□ 0.61
PTPN11-201ENST00000351677 ZFYVE27Q5T4F4 411 aa18.85■□□□□ 0.61
PTPN11-201ENST00000351677 PTPRCP08575 1304 aa18.85■□□□□ 0.61
PTPN11-201ENST00000351677 ODF2Q5BJF6 829 aa18.85■□□□□ 0.61
PTPN11-201ENST00000351677 PEG3Q9GZU2 1588 aa18.84■□□□□ 0.61
PTPN11-201ENST00000351677 UQCRHLA0A096LP55 91 aa18.84■□□□□ 0.61
PTPN11-201ENST00000351677 UQCRHP07919 91 aa18.84■□□□□ 0.61
PTPN11-201ENST00000351677 AMOTQ4VCS5 1084 aa18.84■□□□□ 0.61
PTPN11-201ENST00000351677 CCDC112Q8NEF3 446 aa18.84■□□□□ 0.61
PTPN11-201ENST00000351677 STARD3NLO95772 234 aa18.84■□□□□ 0.61
PTPN11-201ENST00000351677 ABCF2Q9UG63 623 aa18.84■□□□□ 0.61
PTPN11-201ENST00000351677 NOL7Q9UMY1 257 aaKnown RBP18.84■□□□□ 0.61
PTPN11-201ENST00000351677 ZHX3Q9H4I2 956 aa18.83■□□□□ 0.61
PTPN11-201ENST00000351677 UGGT2Q9NYU1 1516 aa18.83■□□□□ 0.61
PTPN11-201ENST00000351677 IFIT1P09914 478 aaKnown RBP18.83■□□□□ 0.6
PTPN11-201ENST00000351677 U3KPZ7 1027 aaPredicted RBP18.83■□□□□ 0.6
PTPN11-201ENST00000351677 IGHMBP2P38935 993 aaKnown RBP18.83■□□□□ 0.6
PTPN11-201ENST00000351677 HSP90AB2PQ58FF8 381 aa18.82■□□□□ 0.6
PTPN11-201ENST00000351677 SKIDA1Q1XH10 827 aa18.82■□□□□ 0.6
PTPN11-201ENST00000351677 ZNHIT6Q9NWK9 470 aaKnown RBP18.82■□□□□ 0.6
PTPN11-201ENST00000351677 SOGA3Q5TF21 947 aa18.82■□□□□ 0.6
PTPN11-201ENST00000351677 DHX29Q7Z478 1369 aaKnown RBP18.82■□□□□ 0.6
PTPN11-201ENST00000351677 BMP2KLQ5H9B9 411 aa18.82■□□□□ 0.6
PTPN11-201ENST00000351677 GUCY1B3Q02153 619 aa18.81■□□□□ 0.6
PTPN11-201ENST00000351677 CDR1P51861 262 aa18.81■□□□□ 0.6
PTPN11-201ENST00000351677 DBF4Q9UBU7 674 aaPredicted RBP18.81■□□□□ 0.6
PTPN11-201ENST00000351677 RALGAPBQ86X10 1494 aa18.81■□□□□ 0.6
PTPN11-201ENST00000351677 STIM1Q13586 685 aa18.81■□□□□ 0.6
PTPN11-201ENST00000351677 ERCC4Q92889 916 aaPredicted RBP18.81■□□□□ 0.6
PTPN11-201ENST00000351677 TMOD3Q9NYL9 352 aa18.81■□□□□ 0.6
PTPN11-201ENST00000351677 CBFA2T2O43439 604 aa18.81■□□□□ 0.6
PTPN11-201ENST00000351677 AKAP2Q9Y2D5 859 aa18.81■□□□□ 0.6
PTPN11-201ENST00000351677 MAP3K2Q9Y2U5 619 aa18.8■□□□□ 0.6
PTPN11-201ENST00000351677 PCDHB15Q9Y5E8 787 aa18.8■□□□□ 0.6
PTPN11-201ENST00000351677 TBC1D32Q96NH3 1257 aa18.8■□□□□ 0.6
PTPN11-201ENST00000351677 GDPD2Q9HCC8 539 aa18.8■□□□□ 0.6
PTPN11-201ENST00000351677 TANGO6Q9C0B7 1094 aa18.8■□□□□ 0.6
PTPN11-201ENST00000351677 ANKRD36BQ8N2N9 1353 aa18.79■□□□□ 0.6
PTPN11-201ENST00000351677 ACEP12821 1306 aa18.79■□□□□ 0.6
PTPN11-201ENST00000351677 ZSCAN30Q86W11 494 aa18.79■□□□□ 0.6
PTPN11-201ENST00000351677 LIMCH1Q9UPQ0 1083 aa18.79■□□□□ 0.6
PTPN11-201ENST00000351677 HYPKQ9NX55 129 aa18.79■□□□□ 0.6
PTPN11-201ENST00000351677 RAPGEF6Q8TEU7 1601 aa18.79■□□□□ 0.6
PTPN11-201ENST00000351677 KDM5BQ9UGL1 1544 aa18.79■□□□□ 0.6
PTPN11-201ENST00000351677 TTC21BQ7Z4L5 1316 aa18.78■□□□□ 0.6
PTPN11-201ENST00000351677 CCDC183Q5T5S1 534 aa18.78■□□□□ 0.6
PTPN11-201ENST00000351677 SH2B1Q9NRF2 756 aaPredicted RBP18.78■□□□□ 0.6
PTPN11-201ENST00000351677 RBM5P52756 815 aaKnown RBP eCLIP18.78■□□□□ 0.6
PTPN11-201ENST00000351677 IL16Q14005 1332 aa18.78■□□□□ 0.6
PTPN11-201ENST00000351677 A0A087WZG4 1122 aa18.78■□□□□ 0.6
PTPN11-201ENST00000351677 ASXL1Q8IXJ9 1541 aa18.78■□□□□ 0.6
PTPN11-201ENST00000351677 PDIA4P13667 645 aaKnown RBP18.78■□□□□ 0.6
PTPN11-201ENST00000351677 TTC22Q5TAA0 569 aa18.78■□□□□ 0.6
PTPN11-201ENST00000351677 DEF6Q9H4E7 631 aa18.78■□□□□ 0.6
PTPN11-201ENST00000351677 WASF1Q92558 559 aa18.78■□□□□ 0.6
PTPN11-201ENST00000351677 MINDY4BA8MYZ0 360 aa18.77■□□□□ 0.6
PTPN11-201ENST00000351677 ANXA1P04083 346 aa18.77■□□□□ 0.6
PTPN11-201ENST00000351677 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.6
PTPN11-201ENST00000351677 PPP1R42Q7Z4L9 355 aa18.77■□□□□ 0.6
PTPN11-201ENST00000351677 SSBP05455 408 aaKnown RBP eCLIP18.77■□□□□ 0.6
PTPN11-201ENST00000351677 DHX8Q14562 1220 aaKnown RBP18.77■□□□□ 0.6
PTPN11-201ENST00000351677 PI4KAP2A4QPH2 592 aa18.76■□□□□ 0.59
PTPN11-201ENST00000351677 PIP4K2BP78356 416 aa18.76■□□□□ 0.59
PTPN11-201ENST00000351677 PI4KAP1Q8N8J0 262 aa18.76■□□□□ 0.59
PTPN11-201ENST00000351677 NUCB1Q02818 461 aa18.76■□□□□ 0.59
PTPN11-201ENST00000351677 SMTNL1A8MU46 457 aa18.76■□□□□ 0.59
PTPN11-201ENST00000351677 IFIT5Q13325 482 aaKnown RBP18.76■□□□□ 0.59
PTPN11-201ENST00000351677 CFAP100Q494V2 611 aa18.76■□□□□ 0.59
PTPN11-201ENST00000351677 PRAG1Q86YV5 1406 aa18.76■□□□□ 0.59
PTPN11-201ENST00000351677 ECHDC1Q9NTX5 307 aa18.76■□□□□ 0.59
PTPN11-201ENST00000351677 SCAND2PQ9GZW5 306 aaPredicted RBP18.75■□□□□ 0.59
PTPN11-201ENST00000351677 CCT2P78371 535 aaKnown RBP18.75■□□□□ 0.59
PTPN11-201ENST00000351677 CCDC82Q8N4S0 544 aa18.75■□□□□ 0.59
PTPN11-201ENST00000351677 ZBTB3Q9H5J0 574 aa18.75■□□□□ 0.59
PTPN11-201ENST00000351677 ATP10BO94823 1461 aa18.75■□□□□ 0.59
PTPN11-201ENST00000351677 MEIS3Q99687 375 aa18.75■□□□□ 0.59
PTPN11-201ENST00000351677 PLEKHH1Q9ULM0 1364 aa18.75■□□□□ 0.59
PTPN11-201ENST00000351677 JARID2Q92833 1246 aaPredicted RBP18.75■□□□□ 0.59
PTPN11-201ENST00000351677 EVI5LQ96CN4 794 aa18.75■□□□□ 0.59
PTPN11-201ENST00000351677 TNNQ9UQP3 1299 aa18.75■□□□□ 0.59
PTPN11-201ENST00000351677 ATP5J2-PTCD1G3V325 749 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms