RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 CHGAP10645 457 aaKnown RBP17.17■□□□□ 0.34
RLIM-202ENST00000349225 MORC2Q9Y6X9 1032 aaPredicted RBP17.17■□□□□ 0.34
RLIM-202ENST00000349225 EFCAB6Q5THR3 1501 aa17.17■□□□□ 0.34
RLIM-202ENST00000349225 TERF2Q15554 542 aa17.17■□□□□ 0.34
RLIM-202ENST00000349225 PLCD3Q8N3E9 789 aa17.17■□□□□ 0.34
RLIM-202ENST00000349225 C16orf45Q96MC5 204 aaPredicted RBP17.17■□□□□ 0.34
RLIM-202ENST00000349225 ESYT1Q9BSJ8 1104 aa17.17■□□□□ 0.34
RLIM-202ENST00000349225 KCNJ4P48050 445 aa17.17■□□□□ 0.34
RLIM-202ENST00000349225 PDE1AP54750 535 aa17.17■□□□□ 0.34
RLIM-202ENST00000349225 KIF18AQ8NI77 898 aa17.17■□□□□ 0.34
RLIM-202ENST00000349225 MSH6P52701 1360 aa17.16■□□□□ 0.34
RLIM-202ENST00000349225 MCM2P49736 904 aa17.16■□□□□ 0.34
RLIM-202ENST00000349225 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
RLIM-202ENST00000349225 API5Q9BZZ5 524 aaKnown RBP17.16■□□□□ 0.34
RLIM-202ENST00000349225 MEIS3Q99687 375 aa17.16■□□□□ 0.34
RLIM-202ENST00000349225 CFAP65Q6ZU64 1925 aaKnown RBP17.16■□□□□ 0.34
RLIM-202ENST00000349225 WDR33Q9C0J8 1336 aaKnown RBP17.16■□□□□ 0.34
RLIM-202ENST00000349225 DLG5Q8TDM6 1919 aa17.16■□□□□ 0.34
RLIM-202ENST00000349225 NFE2L2Q16236 605 aa17.16■□□□□ 0.34
RLIM-202ENST00000349225 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
RLIM-202ENST00000349225 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
RLIM-202ENST00000349225 NRBP1Q9UHY1 535 aa17.15■□□□□ 0.34
RLIM-202ENST00000349225 KIDINS220Q9ULH0 1771 aa17.15■□□□□ 0.34
RLIM-202ENST00000349225 FAM83GA6ND36 823 aa17.15■□□□□ 0.34
RLIM-202ENST00000349225 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
RLIM-202ENST00000349225 ST7Q9NRC1 585 aa17.15■□□□□ 0.34
RLIM-202ENST00000349225 UBE2HP62256 183 aa17.15■□□□□ 0.34
RLIM-202ENST00000349225 PUS7Q96PZ0 661 aaKnown RBP17.15■□□□□ 0.34
RLIM-202ENST00000349225 OSBPL3Q9H4L5 887 aa17.15■□□□□ 0.34
RLIM-202ENST00000349225 SYCP1Q15431 976 aa17.14■□□□□ 0.33
RLIM-202ENST00000349225 LARP6Q9BRS8 491 aaKnown RBP17.14■□□□□ 0.33
RLIM-202ENST00000349225 FANCAO15360 1455 aa17.14■□□□□ 0.33
RLIM-202ENST00000349225 FIBPO43427 364 aa17.13■□□□□ 0.33
RLIM-202ENST00000349225 CAPN2P17655 700 aa17.13■□□□□ 0.33
RLIM-202ENST00000349225 RPAP2Q8IXW5 612 aaPredicted RBP17.13■□□□□ 0.33
RLIM-202ENST00000349225 SALL3Q9BXA9 1300 aa17.13■□□□□ 0.33
RLIM-202ENST00000349225 GNAI1P63096 354 aa17.13■□□□□ 0.33
RLIM-202ENST00000349225 RICTORQ6R327 1708 aa17.13■□□□□ 0.33
RLIM-202ENST00000349225 KMT5BQ4FZB7 885 aa17.12■□□□□ 0.33
RLIM-202ENST00000349225 FAM53CQ9NYF3 392 aa17.12■□□□□ 0.33
RLIM-202ENST00000349225 ASXL2Q76L83 1435 aa17.12■□□□□ 0.33
RLIM-202ENST00000349225 SMTNL1A8MU46 457 aa17.12■□□□□ 0.33
RLIM-202ENST00000349225 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
RLIM-202ENST00000349225 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
RLIM-202ENST00000349225 ANO2Q9NQ90 1003 aa17.12■□□□□ 0.33
RLIM-202ENST00000349225 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
RLIM-202ENST00000349225 ZSCAN22P10073 491 aaPredicted RBP17.12■□□□□ 0.33
RLIM-202ENST00000349225 UNC5CLQ8IV45 518 aa17.12■□□□□ 0.33
RLIM-202ENST00000349225 CCDC186Q7Z3E2 898 aa17.11■□□□□ 0.33
RLIM-202ENST00000349225 SYT1P21579 422 aa17.11■□□□□ 0.33
RLIM-202ENST00000349225 CHMLP26374 656 aa17.11■□□□□ 0.33
RLIM-202ENST00000349225 LUZP1Q86V48 1076 aa17.1■□□□□ 0.33
RLIM-202ENST00000349225 TNNT1P13805 278 aa17.1■□□□□ 0.33
RLIM-202ENST00000349225 ANAPC15P60006 121 aa17.1■□□□□ 0.33
RLIM-202ENST00000349225 ERBB3P21860 1342 aa17.1■□□□□ 0.33
RLIM-202ENST00000349225 RBM6P78332 1123 aaKnown RBP17.09■□□□□ 0.33
RLIM-202ENST00000349225 POLKQ9UBT6 870 aa17.09■□□□□ 0.33
RLIM-202ENST00000349225 SENP3Q9H4L4 574 aaPredicted RBP17.09■□□□□ 0.33
RLIM-202ENST00000349225 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.09■□□□□ 0.33
RLIM-202ENST00000349225 V9GYY5 206 aaPredicted RBP17.09■□□□□ 0.33
RLIM-202ENST00000349225 ERICH4A6NGS2 130 aa17.09■□□□□ 0.33
RLIM-202ENST00000349225 FRMPD1Q5SYB0 1578 aa17.08■□□□□ 0.33
RLIM-202ENST00000349225 TULP2O00295 520 aa17.08■□□□□ 0.33
RLIM-202ENST00000349225 PDIA4P13667 645 aaKnown RBP17.08■□□□□ 0.33
RLIM-202ENST00000349225 DNM1Q05193 864 aaKnown RBP17.08■□□□□ 0.33
RLIM-202ENST00000349225 OSCARQ8IYS5 282 aa17.08■□□□□ 0.33
RLIM-202ENST00000349225 KIAA0232Q92628 1395 aa17.08■□□□□ 0.33
RLIM-202ENST00000349225 ABCC3O15438 1527 aa17.08■□□□□ 0.32
RLIM-202ENST00000349225 F13A1P00488 732 aa17.08■□□□□ 0.32
RLIM-202ENST00000349225 TPM3P06753 285 aa17.08■□□□□ 0.32
RLIM-202ENST00000349225 MRVI1Q9Y6F6 885 aa17.08■□□□□ 0.32
RLIM-202ENST00000349225 STX6O43752 255 aa17.08■□□□□ 0.32
RLIM-202ENST00000349225 SRPK2P78362 688 aaKnown RBP17.08■□□□□ 0.32
RLIM-202ENST00000349225 ZSCAN25Q6NSZ9 544 aa17.08■□□□□ 0.32
RLIM-202ENST00000349225 EXOC6BQ9Y2D4 811 aa17.08■□□□□ 0.32
RLIM-202ENST00000349225 USP27XA6NNY8 438 aa17.06■□□□□ 0.32
RLIM-202ENST00000349225 LARGE1O95461 756 aa17.06■□□□□ 0.32
RLIM-202ENST00000349225 RIMS2Q9UQ26 1411 aa17.06■□□□□ 0.32
RLIM-202ENST00000349225 KRT222Q8N1A0 295 aa17.06■□□□□ 0.32
RLIM-202ENST00000349225 ZNF446Q9NWS9 450 aa17.06■□□□□ 0.32
RLIM-202ENST00000349225 DIP2BQ9P265 1576 aa17.06■□□□□ 0.32
RLIM-202ENST00000349225 MAP2P11137 1827 aaKnown RBP17.06■□□□□ 0.32
RLIM-202ENST00000349225 CCDC144BQ3MJ40 725 aa17.06■□□□□ 0.32
RLIM-202ENST00000349225 FBXO38Q6PIJ6 1188 aa17.06■□□□□ 0.32
RLIM-202ENST00000349225 CCDC144CPQ8IYA2 1237 aa17.06■□□□□ 0.32
RLIM-202ENST00000349225 CACTINQ8WUQ7 758 aaKnown RBP17.06■□□□□ 0.32
RLIM-202ENST00000349225 TTC14Q96N46 770 aa17.06■□□□□ 0.32
RLIM-202ENST00000349225 RUFY3Q7L099 469 aa17.05■□□□□ 0.32
RLIM-202ENST00000349225 ZNF215Q9UL58 517 aaPredicted RBP17.05■□□□□ 0.32
RLIM-202ENST00000349225 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
RLIM-202ENST00000349225 CCDC112Q8NEF3 446 aa17.05■□□□□ 0.32
RLIM-202ENST00000349225 RILPL2Q969X0 211 aa17.05■□□□□ 0.32
RLIM-202ENST00000349225 TIGD1Q96MW7 591 aa17.05■□□□□ 0.32
RLIM-202ENST00000349225 GOLGA6L6A8MZA4 724 aa17.05■□□□□ 0.32
RLIM-202ENST00000349225 MCCP23508 829 aa17.04■□□□□ 0.32
RLIM-202ENST00000349225 HSPA4P34932 840 aa17.04■□□□□ 0.32
RLIM-202ENST00000349225 CAMK4Q16566 473 aa17.04■□□□□ 0.32
RLIM-202ENST00000349225 FAM200AQ8TCP9 573 aa17.04■□□□□ 0.32
RLIM-202ENST00000349225 PLA2G4DQ86XP0 818 aa17.04■□□□□ 0.32
RLIM-202ENST00000349225 KIF13AQ9H1H9 1805 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms