RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 RIOK3O14730 519 aaKnown RBP18.91■□□□□ 0.62
LRP8-202ENST00000347547 RPAP1Q9BWH6 1393 aaPredicted RBP18.91■□□□□ 0.62
LRP8-202ENST00000347547 MCCP23508 829 aa18.9■□□□□ 0.62
LRP8-202ENST00000347547 SAFB2Q14151 953 aaKnown RBP eCLIP18.9■□□□□ 0.62
LRP8-202ENST00000347547 OGFRQ9NZT2 677 aa18.9■□□□□ 0.62
LRP8-202ENST00000347547 CPSF1Q10570 1443 aaKnown RBP18.9■□□□□ 0.62
LRP8-202ENST00000347547 SSH2Q76I76 1423 aa18.9■□□□□ 0.62
LRP8-202ENST00000347547 FAM177BA6PVY3 158 aa18.89■□□□□ 0.61
LRP8-202ENST00000347547 VGFO15240 615 aaPredicted RBP18.89■□□□□ 0.61
LRP8-202ENST00000347547 C8orf58Q8NAV2 365 aa18.89■□□□□ 0.61
LRP8-202ENST00000347547 SPDYE4A6NLX3 237 aa18.88■□□□□ 0.61
LRP8-202ENST00000347547 GABPB1Q06547 395 aaPredicted RBP18.88■□□□□ 0.61
LRP8-202ENST00000347547 MPNDQ8N594 471 aa18.88■□□□□ 0.61
LRP8-202ENST00000347547 THUMPD2Q9BTF0 503 aaKnown RBP18.88■□□□□ 0.61
LRP8-202ENST00000347547 FUCA2Q9BTY2 467 aa18.88■□□□□ 0.61
LRP8-202ENST00000347547 KIF20BQ96Q89 1820 aa18.88■□□□□ 0.61
LRP8-202ENST00000347547 ZBTB7CA1YPR0 619 aa18.88■□□□□ 0.61
LRP8-202ENST00000347547 HCLS1P14317 486 aaPredicted RBP18.88■□□□□ 0.61
LRP8-202ENST00000347547 LMOD3Q0VAK6 560 aa18.88■□□□□ 0.61
LRP8-202ENST00000347547 PHACTR3Q96KR7 559 aa18.88■□□□□ 0.61
LRP8-202ENST00000347547 ESYT1Q9BSJ8 1104 aa18.88■□□□□ 0.61
LRP8-202ENST00000347547 KCNF1Q9H3M0 494 aa18.88■□□□□ 0.61
LRP8-202ENST00000347547 SMARCA5O60264 1052 aaPredicted RBP18.87■□□□□ 0.61
LRP8-202ENST00000347547 U2AF2P26368 475 aaKnown RBP eCLIP18.87■□□□□ 0.61
LRP8-202ENST00000347547 UBE2HP62256 183 aa18.87■□□□□ 0.61
LRP8-202ENST00000347547 UBR1Q8IWV7 1749 aa18.87■□□□□ 0.61
LRP8-202ENST00000347547 C3P01024 1663 aa18.87■□□□□ 0.61
LRP8-202ENST00000347547 EPB41L2O43491 1005 aaKnown RBP18.86■□□□□ 0.61
LRP8-202ENST00000347547 PDE1AP54750 535 aa18.86■□□□□ 0.61
LRP8-202ENST00000347547 DNAJC5Q9H3Z4 198 aa18.86■□□□□ 0.61
LRP8-202ENST00000347547 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
LRP8-202ENST00000347547 FER1L4A9Z1Z3 1794 aa18.86■□□□□ 0.61
LRP8-202ENST00000347547 NRXN3Q9Y4C0 1643 aa18.86■□□□□ 0.61
LRP8-202ENST00000347547 ELL2O00472 640 aaPredicted RBP18.86■□□□□ 0.61
LRP8-202ENST00000347547 GDPD2Q9HCC8 539 aa18.86■□□□□ 0.61
LRP8-202ENST00000347547 PYCARDQ9ULZ3 195 aa18.86■□□□□ 0.61
LRP8-202ENST00000347547 GTF2E1P29083 439 aaPredicted RBP18.85■□□□□ 0.61
LRP8-202ENST00000347547 ALKQ9UM73 1620 aa18.85■□□□□ 0.61
LRP8-202ENST00000347547 GOLGA6L6A8MZA4 724 aa18.85■□□□□ 0.61
LRP8-202ENST00000347547 SRPK2P78362 688 aaKnown RBP18.84■□□□□ 0.61
LRP8-202ENST00000347547 SRCIN1Q9C0H9 1055 aa18.84■□□□□ 0.61
LRP8-202ENST00000347547 TUBGCP6Q96RT7 1819 aa18.84■□□□□ 0.61
LRP8-202ENST00000347547 RIMS2Q9UQ26 1411 aa18.84■□□□□ 0.61
LRP8-202ENST00000347547 HAP1P54257 671 aaPredicted RBP18.84■□□□□ 0.61
LRP8-202ENST00000347547 STK26Q9P289 416 aa18.84■□□□□ 0.61
LRP8-202ENST00000347547 PALD1Q9ULE6 856 aa18.84■□□□□ 0.61
LRP8-202ENST00000347547 HMMRO75330 724 aa18.83■□□□□ 0.61
LRP8-202ENST00000347547 BBXQ8WY36 941 aaPredicted RBP18.83■□□□□ 0.61
LRP8-202ENST00000347547 SALL3Q9BXA9 1300 aa18.83■□□□□ 0.6
LRP8-202ENST00000347547 NCBP1Q09161 790 aaKnown RBP18.83■□□□□ 0.6
LRP8-202ENST00000347547 POLKQ9UBT6 870 aa18.83■□□□□ 0.6
LRP8-202ENST00000347547 KIAA0232Q92628 1395 aa18.83■□□□□ 0.6
LRP8-202ENST00000347547 PTPRMP28827 1452 aa18.82■□□□□ 0.6
LRP8-202ENST00000347547 MSH6P52701 1360 aa18.82■□□□□ 0.6
LRP8-202ENST00000347547 TRHP20396 242 aaPredicted RBP18.82■□□□□ 0.6
LRP8-202ENST00000347547 HDGFL2Q7Z4V5 671 aaPredicted RBP18.82■□□□□ 0.6
LRP8-202ENST00000347547 CTNNA3Q9UI47 895 aa18.82■□□□□ 0.6
LRP8-202ENST00000347547 PTPRCP08575 1304 aa18.82■□□□□ 0.6
LRP8-202ENST00000347547 TNRQ92752 1358 aa18.81■□□□□ 0.6
LRP8-202ENST00000347547 AP5Z1O43299 807 aa18.81■□□□□ 0.6
LRP8-202ENST00000347547 ZSCAN22P10073 491 aaPredicted RBP18.81■□□□□ 0.6
LRP8-202ENST00000347547 TMEM51Q9NW97 253 aa18.81■□□□□ 0.6
LRP8-202ENST00000347547 SMTNL1A8MU46 457 aa18.8■□□□□ 0.6
LRP8-202ENST00000347547 CNPY2Q9Y2B0 182 aa18.8■□□□□ 0.6
LRP8-202ENST00000347547 CGNQ9P2M7 1197 aaKnown RBP18.79■□□□□ 0.6
LRP8-202ENST00000347547 DDX41Q9UJV9 622 aaKnown RBP18.79■□□□□ 0.6
LRP8-202ENST00000347547 CHMLP26374 656 aa18.79■□□□□ 0.6
LRP8-202ENST00000347547 ZNF771Q7L3S4 317 aaPredicted RBP18.79■□□□□ 0.6
LRP8-202ENST00000347547 MEIS3Q99687 375 aa18.78■□□□□ 0.6
LRP8-202ENST00000347547 ATP6V1DQ9Y5K8 247 aa18.78■□□□□ 0.6
LRP8-202ENST00000347547 MORC2Q9Y6X9 1032 aaPredicted RBP18.78■□□□□ 0.6
LRP8-202ENST00000347547 CDK12Q9NYV4 1490 aaPredicted RBP18.78■□□□□ 0.6
LRP8-202ENST00000347547 HMOX1P09601 288 aa18.78■□□□□ 0.6
LRP8-202ENST00000347547 IL13P35225 146 aa18.78■□□□□ 0.6
LRP8-202ENST00000347547 YTHDC2Q9H6S0 1430 aaKnown RBP18.78■□□□□ 0.6
LRP8-202ENST00000347547 APBB1O00213 710 aa18.77■□□□□ 0.6
LRP8-202ENST00000347547 FOXD4L6Q3SYB3 417 aaPredicted RBP18.77■□□□□ 0.6
LRP8-202ENST00000347547 FOXD4L3Q6VB84 417 aaPredicted RBP18.77■□□□□ 0.6
LRP8-202ENST00000347547 MINK1Q8N4C8 1332 aaPredicted RBP18.77■□□□□ 0.6
LRP8-202ENST00000347547 DLG5Q8TDM6 1919 aa18.77■□□□□ 0.6
LRP8-202ENST00000347547 SLFN14P0C7P3 912 aa18.76■□□□□ 0.59
LRP8-202ENST00000347547 ANO2Q9NQ90 1003 aa18.76■□□□□ 0.59
LRP8-202ENST00000347547 NOL8Q76FK4 1167 aaKnown RBP18.76■□□□□ 0.59
LRP8-202ENST00000347547 ESF1Q9H501 851 aaKnown RBP18.76■□□□□ 0.59
LRP8-202ENST00000347547 GIMAP6Q6P9H5 292 aa18.75■□□□□ 0.59
LRP8-202ENST00000347547 PAXBP1Q9Y5B6 917 aa18.75■□□□□ 0.59
LRP8-202ENST00000347547 STX6O43752 255 aa18.75■□□□□ 0.59
LRP8-202ENST00000347547 F13A1P00488 732 aa18.75■□□□□ 0.59
LRP8-202ENST00000347547 CCDC192P0DO97 292 aa18.75■□□□□ 0.59
LRP8-202ENST00000347547 HSPA4P34932 840 aa18.75■□□□□ 0.59
LRP8-202ENST00000347547 STAP2Q9UGK3 403 aa18.75■□□□□ 0.59
LRP8-202ENST00000347547 KRT24Q2M2I5 525 aa18.74■□□□□ 0.59
LRP8-202ENST00000347547 PRAM1Q96QH2 718 aa18.74■□□□□ 0.59
LRP8-202ENST00000347547 UPF3BQ9BZI7 483 aaKnown RBP18.74■□□□□ 0.59
LRP8-202ENST00000347547 DLC1Q96QB1 1528 aa18.74■□□□□ 0.59
LRP8-202ENST00000347547 TCHHQ07283 1943 aa18.74■□□□□ 0.59
LRP8-202ENST00000347547 FAM193AP78312 1265 aa18.74■□□□□ 0.59
LRP8-202ENST00000347547 AOX1Q06278 1338 aa18.73■□□□□ 0.59
LRP8-202ENST00000347547 FAM200AQ8TCP9 573 aa18.73■□□□□ 0.59
LRP8-202ENST00000347547 ATP7BP35670 1465 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms