RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 PDILTQ8N807 584 aa9.02□□□□□ -0.96
LIN28B-201ENST00000345080 WDR66Q8TBY9 1149 aa9.02□□□□□ -0.96
LIN28B-201ENST00000345080 SNX21Q969T3 373 aa9.02□□□□□ -0.96
LIN28B-201ENST00000345080 TACO1Q9BSH4 297 aaKnown RBP9.02□□□□□ -0.96
LIN28B-201ENST00000345080 GRIN2AQ12879 1464 aa9.02□□□□□ -0.97
LIN28B-201ENST00000345080 FAM177A1Q8N128 213 aaPredicted RBP9.02□□□□□ -0.97
LIN28B-201ENST00000345080 ODF2Q5BJF6 829 aa9.02□□□□□ -0.97
LIN28B-201ENST00000345080 CEP57Q86XR8 500 aa9.02□□□□□ -0.97
LIN28B-201ENST00000345080 RNF123Q5XPI4 1314 aa9.02□□□□□ -0.97
LIN28B-201ENST00000345080 GPR162Q16538 588 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 IQCEQ6IPM2 695 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 GBP6Q6ZN66 633 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 MAP2K2P36507 400 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 LMAN1P49257 510 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 RBM42Q9BTD8 480 aaKnown RBP9.01□□□□□ -0.97
LIN28B-201ENST00000345080 LRRCC1Q9C099 1032 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 ABCC5O15440 1437 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 CAMSAP2Q08AD1 1489 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 DIXDC1Q155Q3 683 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.01□□□□□ -0.97
LIN28B-201ENST00000345080 CFAP45Q9UL16 551 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 ADAMTS8Q9UP79 889 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 NAA25Q14CX7 972 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 POTEDQ86YR6 584 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 CCDC50Q8IVM0 306 aa9.01□□□□□ -0.97
LIN28B-201ENST00000345080 TRDNQ13061 729 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 CDCA7Q9BWT1 371 aaPredicted RBP9□□□□□ -0.97
LIN28B-201ENST00000345080 HOOK1Q9UJC3 728 aaKnown RBP9□□□□□ -0.97
LIN28B-201ENST00000345080 GOLGA6L9A6NEM1 432 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 GSDMDP57764 484 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 SLFN5Q08AF3 891 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 GCC2Q8IWJ2 1684 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 CBFA2T2O43439 604 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 RAPGEF3O95398 923 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 ZSCAN23Q3MJ62 389 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 FAM114A1Q8IWE2 563 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 ZNF692Q9BU19 519 aaPredicted RBP9□□□□□ -0.97
LIN28B-201ENST00000345080 CABP2Q9NPB3 220 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 MKRN1Q9UHC7 482 aaKnown RBP9□□□□□ -0.97
LIN28B-201ENST00000345080 CCDC196A0A1B0GTZ2 297 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 VPS53Q5VIR6 699 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 PIBF1Q8WXW3 757 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 ABCC11Q96J66 1382 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 CCDC160A6NGH7 325 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 KIF4AO95239 1232 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 GEMIN8Q9NWZ8 242 aaKnown RBP9□□□□□ -0.97
LIN28B-201ENST00000345080 PDZRN3Q9UPQ7 1066 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 KIF14Q15058 1648 aa9□□□□□ -0.97
LIN28B-201ENST00000345080 SMC2O95347 1197 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 TUBBP07437 444 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 EZRP15311 586 aaKnown RBP8.99□□□□□ -0.97
LIN28B-201ENST00000345080 GNAI1P63096 354 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 RNF168Q8IYW5 571 aaPredicted RBP8.99□□□□□ -0.97
LIN28B-201ENST00000345080 MIPOL1Q8TD10 442 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 BICD2Q8TD16 824 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 ZMAT2Q96NC0 199 aaKnown RBP8.99□□□□□ -0.97
LIN28B-201ENST00000345080 EXOC5O00471 708 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 NEBLO76041 1014 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 ZNF445P59923 1031 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 TCHPQ9BT92 498 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 IBTKQ9P2D0 1353 aaPredicted RBP8.99□□□□□ -0.97
LIN28B-201ENST00000345080 ZMYM4Q5VZL5 1548 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 SPATA24Q86W54 205 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 MICALL1Q8N3F8 863 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 A6NNZ2 444 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 ZSCAN12O43309 604 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 NLRP6P59044 892 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 TUBB8Q3ZCM7 444 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 ANKRD45Q5TZF3 282 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 CEP135Q66GS9 1140 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 RUFY2Q8WXA3 655 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 SWAP70Q9UH65 585 aa8.99□□□□□ -0.97
LIN28B-201ENST00000345080 MINK1Q8N4C8 1332 aaPredicted RBP8.98□□□□□ -0.97
LIN28B-201ENST00000345080 CEP63Q96MT8 703 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 LRRFIP2Q9Y608 721 aaKnown RBP8.98□□□□□ -0.97
LIN28B-201ENST00000345080 AP1ARQ63HQ0 302 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 SMC3Q9UQE7 1217 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 NPHP3Q7Z494 1330 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 H3BQV1 296 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 IFFO2Q5TF58 517 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 ERO1AQ96HE7 468 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 RSPH14Q9UHP6 348 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 SYCE3A1L190 88 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 MARCH6O60337 910 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 CCDC73Q6ZRK6 1079 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 SEPT14Q6ZU15 432 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 TMEM87AQ8NBN3 555 aa8.98□□□□□ -0.97
LIN28B-201ENST00000345080 ST5P78524 1137 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 FLIIQ13045 1269 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 SMARCC1Q92922 1105 aaPredicted RBP8.97□□□□□ -0.97
LIN28B-201ENST00000345080 ZNHIT6Q9NWK9 470 aaKnown RBP8.97□□□□□ -0.97
LIN28B-201ENST00000345080 TRAK1Q9UPV9 953 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 ZNF853P0CG23 659 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 SMC5Q8IY18 1101 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 GNL3LQ9NVN8 582 aaKnown RBP8.97□□□□□ -0.97
LIN28B-201ENST00000345080 ATP2C2O75185 946 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 SLU7O95391 586 aaKnown RBP8.97□□□□□ -0.97
LIN28B-201ENST00000345080 PDCP20941 246 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 CABP4P57796 275 aa8.97□□□□□ -0.97
LIN28B-201ENST00000345080 RAB3GAP1Q15042 981 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms