RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 ZNF428Q96B54 188 aa14.43□□□□□ -0.1
RBM39-202ENST00000338163 KIAA2012Q0VF49 1180 aa14.43□□□□□ -0.1
RBM39-202ENST00000338163 ESCO1Q5FWF5 840 aa14.42□□□□□ -0.1
RBM39-202ENST00000338163 C8orf58Q8NAV2 365 aa14.42□□□□□ -0.1
RBM39-202ENST00000338163 ARHGAP45Q92619 1136 aa14.42□□□□□ -0.1
RBM39-202ENST00000338163 ZNF830Q96NB3 372 aaPredicted RBP14.42□□□□□ -0.1
RBM39-202ENST00000338163 GDPD2Q9HCC8 539 aa14.42□□□□□ -0.1
RBM39-202ENST00000338163 REC8O95072 547 aa14.42□□□□□ -0.1
RBM39-202ENST00000338163 CFAP44Q96MT7 982 aa14.42□□□□□ -0.1
RBM39-202ENST00000338163 ABCC4O15439 1325 aa14.42□□□□□ -0.1
RBM39-202ENST00000338163 MCM5P33992 734 aa14.41□□□□□ -0.1
RBM39-202ENST00000338163 GNAI1P63096 354 aa14.41□□□□□ -0.1
RBM39-202ENST00000338163 HDGFL2Q7Z4V5 671 aaPredicted RBP14.41□□□□□ -0.1
RBM39-202ENST00000338163 MTERF4Q7Z6M4 381 aaKnown RBP14.41□□□□□ -0.1
RBM39-202ENST00000338163 API5Q9BZZ5 524 aaKnown RBP14.41□□□□□ -0.1
RBM39-202ENST00000338163 MSH6P52701 1360 aa14.41□□□□□ -0.1
RBM39-202ENST00000338163 LRRC7Q96NW7 1537 aa14.41□□□□□ -0.1
RBM39-202ENST00000338163 USP32Q8NFA0 1604 aa14.41□□□□□ -0.1
RBM39-202ENST00000338163 NGDNQ8NEJ9 315 aaKnown RBP14.41□□□□□ -0.1
RBM39-202ENST00000338163 DCTPP1Q9H773 170 aa14.41□□□□□ -0.1
RBM39-202ENST00000338163 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.41□□□□□ -0.1
RBM39-202ENST00000338163 ATP7BP35670 1465 aa14.41□□□□□ -0.1
RBM39-202ENST00000338163 MBD3O95983 291 aa14.4□□□□□ -0.1
RBM39-202ENST00000338163 DCTN1Q14203 1278 aa14.4□□□□□ -0.1
RBM39-202ENST00000338163 NFE2L2Q16236 605 aa14.4□□□□□ -0.1
RBM39-202ENST00000338163 ORAI2Q96SN7 254 aa14.4□□□□□ -0.1
RBM39-202ENST00000338163 TSPY26PQ9H489 355 aa14.4□□□□□ -0.1
RBM39-202ENST00000338163 COL3A1P02461 1466 aaPredicted RBP14.4□□□□□ -0.1
RBM39-202ENST00000338163 FAM83GA6ND36 823 aa14.4□□□□□ -0.1
RBM39-202ENST00000338163 FAM177BA6PVY3 158 aa14.4□□□□□ -0.1
RBM39-202ENST00000338163 PLCB2Q00722 1185 aa14.4□□□□□ -0.1
RBM39-202ENST00000338163 NALCNQ8IZF0 1738 aa14.4□□□□□ -0.1
RBM39-202ENST00000338163 BRPF1P55201 1214 aaPredicted RBP14.39□□□□□ -0.11
RBM39-202ENST00000338163 CADPS2Q86UW7 1296 aa14.39□□□□□ -0.11
RBM39-202ENST00000338163 ACEP12821 1306 aa14.39□□□□□ -0.11
RBM39-202ENST00000338163 C17orf53Q8N3J3 647 aaPredicted RBP14.39□□□□□ -0.11
RBM39-202ENST00000338163 TMX3Q96JJ7 454 aa14.39□□□□□ -0.11
RBM39-202ENST00000338163 TSHZ3Q63HK5 1081 aa14.39□□□□□ -0.11
RBM39-202ENST00000338163 PODXL2Q9NZ53 605 aa14.39□□□□□ -0.11
RBM39-202ENST00000338163 ERC2O15083 957 aa14.38□□□□□ -0.11
RBM39-202ENST00000338163 IFT57Q9NWB7 429 aa14.38□□□□□ -0.11
RBM39-202ENST00000338163 PHF8Q9UPP1 1060 aa14.38□□□□□ -0.11
RBM39-202ENST00000338163 SMAP1Q8IYB5 467 aaPredicted RBP14.37□□□□□ -0.11
RBM39-202ENST00000338163 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
RBM39-202ENST00000338163 USP25Q9UHP3 1055 aa14.37□□□□□ -0.11
RBM39-202ENST00000338163 KRT24Q2M2I5 525 aa14.37□□□□□ -0.11
RBM39-202ENST00000338163 PLEKHG3A1L390 1219 aa14.36□□□□□ -0.11
RBM39-202ENST00000338163 FOXO3O43524 673 aa14.36□□□□□ -0.11
RBM39-202ENST00000338163 TTC12Q9H892 705 aaPredicted RBP14.36□□□□□ -0.11
RBM39-202ENST00000338163 CDC42BPGQ6DT37 1551 aa14.36□□□□□ -0.11
RBM39-202ENST00000338163 A0A0U1RQG5 324 aaPredicted RBP14.36□□□□□ -0.11
RBM39-202ENST00000338163 POLKQ9UBT6 870 aa14.36□□□□□ -0.11
RBM39-202ENST00000338163 EMILIN1Q9Y6C2 1016 aa14.36□□□□□ -0.11
RBM39-202ENST00000338163 GADD45BO75293 160 aaPredicted RBP14.35□□□□□ -0.11
RBM39-202ENST00000338163 CBX1P83916 185 aa14.35□□□□□ -0.11
RBM39-202ENST00000338163 ANKRD44Q8N8A2 993 aa14.35□□□□□ -0.11
RBM39-202ENST00000338163 CCDC94Q9BW85 323 aaPredicted RBP14.35□□□□□ -0.11
RBM39-202ENST00000338163 CD163L1Q9NR16 1453 aa14.35□□□□□ -0.11
RBM39-202ENST00000338163 CEP85Q6P2H3 762 aa14.35□□□□□ -0.11
RBM39-202ENST00000338163 UPF3BQ9BZI7 483 aaKnown RBP14.35□□□□□ -0.11
RBM39-202ENST00000338163 SLAIN2Q9P270 581 aa14.35□□□□□ -0.11
RBM39-202ENST00000338163 ANKARQ7Z5J8 1434 aa14.35□□□□□ -0.11
RBM39-202ENST00000338163 MEIS3Q99687 375 aa14.34□□□□□ -0.11
RBM39-202ENST00000338163 ANO2Q9NQ90 1003 aa14.34□□□□□ -0.11
RBM39-202ENST00000338163 DDX17Q92841 729 aaKnown RBP14.34□□□□□ -0.11
RBM39-202ENST00000338163 PSME1Q06323 249 aa14.34□□□□□ -0.11
RBM39-202ENST00000338163 SLC4A10Q6U841 1118 aa14.34□□□□□ -0.11
RBM39-202ENST00000338163 MYRIPQ8NFW9 859 aa14.34□□□□□ -0.11
RBM39-202ENST00000338163 C1orf167Q5SNV9 1468 aa14.33□□□□□ -0.11
RBM39-202ENST00000338163 PHF14O94880 888 aa14.33□□□□□ -0.12
RBM39-202ENST00000338163 BRD1O95696 1058 aa14.33□□□□□ -0.12
RBM39-202ENST00000338163 NOLC1Q14978 699 aaKnown RBP eCLIP14.33□□□□□ -0.12
RBM39-202ENST00000338163 TRIM6-TRIM34B2RNG4 842 aa14.32□□□□□ -0.12
RBM39-202ENST00000338163 RPAP2Q8IXW5 612 aaPredicted RBP14.32□□□□□ -0.12
RBM39-202ENST00000338163 RILPL2Q969X0 211 aa14.32□□□□□ -0.12
RBM39-202ENST00000338163 PALD1Q9ULE6 856 aa14.32□□□□□ -0.12
RBM39-202ENST00000338163 PNPLA6Q8IY17 1366 aa14.32□□□□□ -0.12
RBM39-202ENST00000338163 DCCP43146 1447 aa14.32□□□□□ -0.12
RBM39-202ENST00000338163 MST1RQ04912 1400 aa14.32□□□□□ -0.12
RBM39-202ENST00000338163 CPSF1Q10570 1443 aaKnown RBP14.32□□□□□ -0.12
RBM39-202ENST00000338163 FMN2Q9NZ56 1722 aa14.32□□□□□ -0.12
RBM39-202ENST00000338163 HCLS1P14317 486 aaPredicted RBP14.31□□□□□ -0.12
RBM39-202ENST00000338163 NME9Q86XW9 330 aa14.31□□□□□ -0.12
RBM39-202ENST00000338163 LTBP4Q8N2S1 1624 aa14.31□□□□□ -0.12
RBM39-202ENST00000338163 RGPD8O14715 1765 aaPredicted RBP14.31□□□□□ -0.12
RBM39-202ENST00000338163 ADCY5O95622 1261 aa14.31□□□□□ -0.12
RBM39-202ENST00000338163 ZNF853P0CG23 659 aa14.31□□□□□ -0.12
RBM39-202ENST00000338163 MCCP23508 829 aa14.31□□□□□ -0.12
RBM39-202ENST00000338163 USP48Q86UV5 1035 aa14.31□□□□□ -0.12
RBM39-202ENST00000338163 ZRANB1Q9UGI0 708 aa14.31□□□□□ -0.12
RBM39-202ENST00000338163 EXOC6BQ9Y2D4 811 aa14.31□□□□□ -0.12
RBM39-202ENST00000338163 PPP4R3BQ5MIZ7 849 aa14.3□□□□□ -0.12
RBM39-202ENST00000338163 NUTM2GQ5VZR2 741 aa14.3□□□□□ -0.12
RBM39-202ENST00000338163 LMOD2Q6P5Q4 547 aa14.3□□□□□ -0.12
RBM39-202ENST00000338163 PDE1AP54750 535 aa14.3□□□□□ -0.12
RBM39-202ENST00000338163 HMGN5P82970 282 aaKnown RBP14.3□□□□□ -0.12
RBM39-202ENST00000338163 LMOD3Q0VAK6 560 aa14.3□□□□□ -0.12
RBM39-202ENST00000338163 PIBF1Q8WXW3 757 aa14.3□□□□□ -0.12
RBM39-202ENST00000338163 RRS1Q15050 365 aaKnown RBP14.29□□□□□ -0.12
RBM39-202ENST00000338163 XIRP1Q702N8 1843 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms