RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 KDM6AO15550 1401 aaPredicted RBP15.61■□□□□ 0.09
SPTLC1-202ENST00000337841 HOXD11P31277 338 aaPredicted RBP15.61■□□□□ 0.09
SPTLC1-202ENST00000337841 EN1Q05925 392 aaPredicted RBP15.61■□□□□ 0.09
SPTLC1-202ENST00000337841 DEFB132Q7Z7B7 95 aa15.61■□□□□ 0.09
SPTLC1-202ENST00000337841 BTBD11A6QL63 1104 aa15.6■□□□□ 0.09
SPTLC1-202ENST00000337841 CALD1Q05682 793 aaKnown RBP15.6■□□□□ 0.09
SPTLC1-202ENST00000337841 ATG3Q9NT62 314 aa15.6■□□□□ 0.09
SPTLC1-202ENST00000337841 ASAP1Q9ULH1 1129 aa15.6■□□□□ 0.09
SPTLC1-202ENST00000337841 TRIM35Q9UPQ4 493 aa15.6■□□□□ 0.09
SPTLC1-202ENST00000337841 CEMIPQ8WUJ3 1361 aa15.6■□□□□ 0.09
SPTLC1-202ENST00000337841 CCDC27Q2M243 656 aa15.59■□□□□ 0.09
SPTLC1-202ENST00000337841 CAMKK2Q96RR4 588 aa15.59■□□□□ 0.09
SPTLC1-202ENST00000337841 EZH2Q15910 746 aaKnown RBP15.58■□□□□ 0.08
SPTLC1-202ENST00000337841 TXNRD1Q16881 649 aa15.58■□□□□ 0.08
SPTLC1-202ENST00000337841 TTC5Q8N0Z6 440 aa15.58■□□□□ 0.08
SPTLC1-202ENST00000337841 THUMPD2Q9BTF0 503 aaKnown RBP15.58■□□□□ 0.08
SPTLC1-202ENST00000337841 SALL2Q9Y467 1007 aaPredicted RBP15.58■□□□□ 0.08
SPTLC1-202ENST00000337841 SHANK3Q9BYB0 1731 aa15.57■□□□□ 0.08
SPTLC1-202ENST00000337841 SLC27A3Q5K4L6 730 aa15.57■□□□□ 0.08
SPTLC1-202ENST00000337841 RBM42Q9BTD8 480 aaKnown RBP15.57■□□□□ 0.08
SPTLC1-202ENST00000337841 BABAM1Q9NWV8 329 aa15.57■□□□□ 0.08
SPTLC1-202ENST00000337841 SENP3-EIF4A1A0A087X0R7 540 aa15.56■□□□□ 0.08
SPTLC1-202ENST00000337841 SLC39A6Q13433 755 aa15.56■□□□□ 0.08
SPTLC1-202ENST00000337841 WWC1Q8IX03 1113 aa15.56■□□□□ 0.08
SPTLC1-202ENST00000337841 PALLDQ8WX93 1383 aa15.56■□□□□ 0.08
SPTLC1-202ENST00000337841 KAT6BQ8WYB5 2073 aa15.56■□□□□ 0.08
SPTLC1-202ENST00000337841 PTCD1O75127 700 aaKnown RBP15.55■□□□□ 0.08
SPTLC1-202ENST00000337841 ZNF790Q6PG37 636 aa15.55■□□□□ 0.08
SPTLC1-202ENST00000337841 PROM2Q8N271 834 aa15.55■□□□□ 0.08
SPTLC1-202ENST00000337841 CCNL1Q9UK58 526 aaPredicted RBP15.55■□□□□ 0.08
SPTLC1-202ENST00000337841 LAS1LQ9Y4W2 734 aaKnown RBP15.55■□□□□ 0.08
SPTLC1-202ENST00000337841 LOC102724428A0A0B4J2F2 783 aa15.54■□□□□ 0.08
SPTLC1-202ENST00000337841 ATP6V1AP38606 617 aa15.54■□□□□ 0.08
SPTLC1-202ENST00000337841 SIK1P57059 783 aa15.54■□□□□ 0.08
SPTLC1-202ENST00000337841 NBPF14Q5TI25 921 aa15.54■□□□□ 0.08
SPTLC1-202ENST00000337841 WDR63Q8IWG1 891 aa15.54■□□□□ 0.08
SPTLC1-202ENST00000337841 MIS18AQ9NYP9 233 aa15.54■□□□□ 0.08
SPTLC1-202ENST00000337841 GNAI1P63096 354 aa15.53■□□□□ 0.08
SPTLC1-202ENST00000337841 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
SPTLC1-202ENST00000337841 FMNL2Q96PY5 1086 aa15.53■□□□□ 0.08
SPTLC1-202ENST00000337841 TSPYL4Q9UJ04 414 aa15.53■□□□□ 0.08
SPTLC1-202ENST00000337841 NHSQ6T4R5 1651 aa15.53■□□□□ 0.08
SPTLC1-202ENST00000337841 CHL1O00533 1208 aa15.52■□□□□ 0.08
SPTLC1-202ENST00000337841 TEX13AQ9BXU3 409 aaPredicted RBP15.52■□□□□ 0.08
SPTLC1-202ENST00000337841 KCNQ3O43525 872 aa15.51■□□□□ 0.07
SPTLC1-202ENST00000337841 VSIG10Q8N0Z9 540 aa15.51■□□□□ 0.07
SPTLC1-202ENST00000337841 IFT57Q9NWB7 429 aa15.51■□□□□ 0.07
SPTLC1-202ENST00000337841 SBF2Q86WG5 1849 aa15.51■□□□□ 0.07
SPTLC1-202ENST00000337841 DOT1LQ8TEK3 1739 aa15.51■□□□□ 0.07
SPTLC1-202ENST00000337841 IL16Q14005 1332 aa15.5■□□□□ 0.07
SPTLC1-202ENST00000337841 KCNQ4P56696 695 aa15.5■□□□□ 0.07
SPTLC1-202ENST00000337841 ZNF496Q96IT1 587 aaPredicted RBP15.5■□□□□ 0.07
SPTLC1-202ENST00000337841 LRRC4BQ9NT99 713 aa15.5■□□□□ 0.07
SPTLC1-202ENST00000337841 MRC1P22897 1456 aa15.5■□□□□ 0.07
SPTLC1-202ENST00000337841 SNRPA1P09661 255 aaKnown RBP15.49■□□□□ 0.07
SPTLC1-202ENST00000337841 ZNF853P0CG23 659 aa15.49■□□□□ 0.07
SPTLC1-202ENST00000337841 STK32BQ9NY57 414 aa15.49■□□□□ 0.07
SPTLC1-202ENST00000337841 SCN11AQ9UI33 1791 aa15.49■□□□□ 0.07
SPTLC1-202ENST00000337841 ADAMTS7Q9UKP4 1686 aa15.48■□□□□ 0.07
SPTLC1-202ENST00000337841 STARD3NLO95772 234 aa15.48■□□□□ 0.07
SPTLC1-202ENST00000337841 EIF4A1P60842 406 aaKnown RBP15.48■□□□□ 0.07
SPTLC1-202ENST00000337841 HNRNPUQ00839 825 aaKnown RBP eCLIP15.48■□□□□ 0.07
SPTLC1-202ENST00000337841 SLC4A9Q96Q91 983 aa15.48■□□□□ 0.07
SPTLC1-202ENST00000337841 TOGARAM1Q9Y4F4 1720 aa15.48■□□□□ 0.07
SPTLC1-202ENST00000337841 ITPK1Q13572 414 aa15.47■□□□□ 0.07
SPTLC1-202ENST00000337841 BTAF1O14981 1849 aa15.46■□□□□ 0.07
SPTLC1-202ENST00000337841 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
SPTLC1-202ENST00000337841 RC3H1Q5TC82 1133 aaKnown RBP15.46■□□□□ 0.07
SPTLC1-202ENST00000337841 DNAJC10Q8IXB1 793 aa15.46■□□□□ 0.07
SPTLC1-202ENST00000337841 MYH16Q9H6N6 1097 aa15.46■□□□□ 0.07
SPTLC1-202ENST00000337841 MBIPQ9NS73 344 aa15.46■□□□□ 0.07
SPTLC1-202ENST00000337841 HEG1Q9ULI3 1381 aa15.46■□□□□ 0.07
SPTLC1-202ENST00000337841 ITGB4P16144 1822 aa15.45■□□□□ 0.06
SPTLC1-202ENST00000337841 SLC15A2Q16348 729 aa15.45■□□□□ 0.06
SPTLC1-202ENST00000337841 AK7Q96M32 723 aa15.45■□□□□ 0.06
SPTLC1-202ENST00000337841 TFCP2L1Q9NZI6 479 aa15.45■□□□□ 0.06
SPTLC1-202ENST00000337841 TNS1Q9HBL0 1735 aaKnown RBP15.45■□□□□ 0.06
SPTLC1-202ENST00000337841 GIGYF1O75420 1035 aaPredicted RBP15.44■□□□□ 0.06
SPTLC1-202ENST00000337841 CYP19A1P11511 503 aaPredicted RBP15.44■□□□□ 0.06
SPTLC1-202ENST00000337841 LINC00116Q8NCU8 138 aa15.44■□□□□ 0.06
SPTLC1-202ENST00000337841 CHMP4AQ9BY43 222 aa15.44■□□□□ 0.06
SPTLC1-202ENST00000337841 ZNF521Q96K83 1311 aa15.43■□□□□ 0.06
SPTLC1-202ENST00000337841 E9PSI1 815 aa15.43■□□□□ 0.06
SPTLC1-202ENST00000337841 AKT1S1Q96B36 256 aa15.43■□□□□ 0.06
SPTLC1-202ENST00000337841 USP16Q9Y5T5 823 aa15.43■□□□□ 0.06
SPTLC1-202ENST00000337841 DLG5Q8TDM6 1919 aa15.43■□□□□ 0.06
SPTLC1-202ENST00000337841 EP400Q96L91 3159 aa15.42■□□□□ 0.06
SPTLC1-202ENST00000337841 CRKLP46109 303 aaKnown RBP15.42■□□□□ 0.06
SPTLC1-202ENST00000337841 NPM2Q86SE8 214 aaKnown RBP15.42■□□□□ 0.06
SPTLC1-202ENST00000337841 FLAD1Q8NFF5 587 aa15.42■□□□□ 0.06
SPTLC1-202ENST00000337841 TSR2Q969E8 191 aaKnown RBP15.42■□□□□ 0.06
SPTLC1-202ENST00000337841 CCDC87Q9NVE4 849 aa15.42■□□□□ 0.06
SPTLC1-202ENST00000337841 CNTNAP4Q9C0A0 1308 aa15.42■□□□□ 0.06
SPTLC1-202ENST00000337841 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
SPTLC1-202ENST00000337841 RPS6KA4O75676 772 aa15.41■□□□□ 0.06
SPTLC1-202ENST00000337841 RTCBQ9Y3I0 505 aaKnown RBP15.41■□□□□ 0.06
SPTLC1-202ENST00000337841 PRAMEF22A3QJZ6 481 aa15.4■□□□□ 0.06
SPTLC1-202ENST00000337841 GNPATO15228 680 aa15.4■□□□□ 0.06
SPTLC1-202ENST00000337841 HOXB7P09629 217 aa15.4■□□□□ 0.06
SPTLC1-202ENST00000337841 EIF2S2P20042 333 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms