RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 LIMCH1Q9UPQ0 1083 aa18.6■□□□□ 0.57
HDAC5-202ENST00000336057 AMOTQ4VCS5 1084 aa18.6■□□□□ 0.57
HDAC5-202ENST00000336057 CCDC183Q5T5S1 534 aa18.6■□□□□ 0.57
HDAC5-202ENST00000336057 ZSCAN25Q6NSZ9 544 aa18.6■□□□□ 0.57
HDAC5-202ENST00000336057 DDX54Q8TDD1 881 aaKnown RBP18.6■□□□□ 0.57
HDAC5-202ENST00000336057 AMOTL2Q9Y2J4 779 aa18.6■□□□□ 0.57
HDAC5-202ENST00000336057 PDE4CQ08493 712 aa18.59■□□□□ 0.57
HDAC5-202ENST00000336057 TRIM22Q8IYM9 498 aa18.59■□□□□ 0.57
HDAC5-202ENST00000336057 BOLA2Q9H3K6 86 aa18.59■□□□□ 0.57
HDAC5-202ENST00000336057 ADGRL2O95490 1459 aa18.59■□□□□ 0.57
HDAC5-202ENST00000336057 ZC3H6P61129 1189 aaKnown RBP18.59■□□□□ 0.57
HDAC5-202ENST00000336057 CEP57L1Q8IYX8 460 aa18.59■□□□□ 0.57
HDAC5-202ENST00000336057 TRIM34Q9BYJ4 488 aa18.59■□□□□ 0.57
HDAC5-202ENST00000336057 CCDC112Q8NEF3 446 aa18.58■□□□□ 0.57
HDAC5-202ENST00000336057 RNF123Q5XPI4 1314 aa18.58■□□□□ 0.57
HDAC5-202ENST00000336057 SERPINC1P01008 464 aa18.58■□□□□ 0.57
HDAC5-202ENST00000336057 DDX11Q96FC9 970 aa18.58■□□□□ 0.57
HDAC5-202ENST00000336057 A2MP01023 1474 aa18.58■□□□□ 0.56
HDAC5-202ENST00000336057 KLHL40Q2TBA0 621 aa18.58■□□□□ 0.56
HDAC5-202ENST00000336057 MRPL50Q8N5N7 158 aaKnown RBP18.58■□□□□ 0.56
HDAC5-202ENST00000336057 NACAP1Q9BZK3 213 aa18.58■□□□□ 0.56
HDAC5-202ENST00000336057 DBF4Q9UBU7 674 aaPredicted RBP18.58■□□□□ 0.56
HDAC5-202ENST00000336057 FILIP1LQ4L180 1135 aa18.58■□□□□ 0.56
HDAC5-202ENST00000336057 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
HDAC5-202ENST00000336057 SCAND2PQ9GZW5 306 aaPredicted RBP18.57■□□□□ 0.56
HDAC5-202ENST00000336057 ACBD3Q9H3P7 528 aa18.57■□□□□ 0.56
HDAC5-202ENST00000336057 RRP9O43818 475 aaKnown RBP18.56■□□□□ 0.56
HDAC5-202ENST00000336057 ACEP12821 1306 aa18.56■□□□□ 0.56
HDAC5-202ENST00000336057 SDSP20132 328 aa18.56■□□□□ 0.56
HDAC5-202ENST00000336057 CDKL5O76039 1030 aa18.56■□□□□ 0.56
HDAC5-202ENST00000336057 HSP90B2PQ58FF3 399 aa18.56■□□□□ 0.56
HDAC5-202ENST00000336057 MPRIPQ6WCQ1 1025 aa18.56■□□□□ 0.56
HDAC5-202ENST00000336057 ANKRD44Q8N8A2 993 aa18.56■□□□□ 0.56
HDAC5-202ENST00000336057 SNX21Q969T3 373 aa18.56■□□□□ 0.56
HDAC5-202ENST00000336057 MEIS3Q99687 375 aa18.56■□□□□ 0.56
HDAC5-202ENST00000336057 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
HDAC5-202ENST00000336057 PHF8Q9UPP1 1060 aa18.55■□□□□ 0.56
HDAC5-202ENST00000336057 CAMK4Q16566 473 aa18.55■□□□□ 0.56
HDAC5-202ENST00000336057 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
HDAC5-202ENST00000336057 C8orf58Q8NAV2 365 aa18.55■□□□□ 0.56
HDAC5-202ENST00000336057 CCDC8Q9H0W5 538 aaPredicted RBP18.55■□□□□ 0.56
HDAC5-202ENST00000336057 PRDM11Q9NQV5 511 aa18.55■□□□□ 0.56
HDAC5-202ENST00000336057 CCDC69A6NI79 296 aa18.55■□□□□ 0.56
HDAC5-202ENST00000336057 GNL3LQ9NVN8 582 aaKnown RBP18.55■□□□□ 0.56
HDAC5-202ENST00000336057 SLC3A2P08195 630 aaKnown RBP18.54■□□□□ 0.56
HDAC5-202ENST00000336057 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
HDAC5-202ENST00000336057 DISP1Q96F81 1524 aa18.54■□□□□ 0.56
HDAC5-202ENST00000336057 TSHZ3Q63HK5 1081 aa18.54■□□□□ 0.56
HDAC5-202ENST00000336057 POLKQ9UBT6 870 aa18.54■□□□□ 0.56
HDAC5-202ENST00000336057 MTMR7Q9Y216 660 aa18.54■□□□□ 0.56
HDAC5-202ENST00000336057 U3KPZ7 1027 aaPredicted RBP18.54■□□□□ 0.56
HDAC5-202ENST00000336057 TXLNAP40222 546 aa18.54■□□□□ 0.56
HDAC5-202ENST00000336057 PPP1R42Q7Z4L9 355 aa18.54■□□□□ 0.56
HDAC5-202ENST00000336057 SMC5Q8IY18 1101 aa18.54■□□□□ 0.56
HDAC5-202ENST00000336057 SMARCE1Q969G3 411 aa18.54■□□□□ 0.56
HDAC5-202ENST00000336057 HYPKQ9NX55 129 aa18.54■□□□□ 0.56
HDAC5-202ENST00000336057 FILIP1Q7Z7B0 1213 aa18.53■□□□□ 0.56
HDAC5-202ENST00000336057 MYD88Q99836 296 aa18.53■□□□□ 0.56
HDAC5-202ENST00000336057 ZBTB40Q9NUA8 1239 aa18.53■□□□□ 0.56
HDAC5-202ENST00000336057 DACH1Q9UI36 760 aa18.53■□□□□ 0.56
HDAC5-202ENST00000336057 PIK3R4Q99570 1358 aa18.53■□□□□ 0.56
HDAC5-202ENST00000336057 PIP4K2AP48426 406 aaPredicted RBP18.53■□□□□ 0.56
HDAC5-202ENST00000336057 IMMTQ16891 758 aaKnown RBP18.53■□□□□ 0.56
HDAC5-202ENST00000336057 NAP1L1P55209 391 aaKnown RBP18.52■□□□□ 0.56
HDAC5-202ENST00000336057 EVI5LQ96CN4 794 aa18.52■□□□□ 0.56
HDAC5-202ENST00000336057 SAMD9Q5K651 1589 aa18.52■□□□□ 0.56
HDAC5-202ENST00000336057 HSP90AB2PQ58FF8 381 aa18.52■□□□□ 0.56
HDAC5-202ENST00000336057 MPHOSPH8Q99549 860 aa18.52■□□□□ 0.56
HDAC5-202ENST00000336057 ZMYM4Q5VZL5 1548 aa18.52■□□□□ 0.56
HDAC5-202ENST00000336057 GDPD2Q9HCC8 539 aa18.52■□□□□ 0.56
HDAC5-202ENST00000336057 VAMP4O75379 141 aa18.52■□□□□ 0.55
HDAC5-202ENST00000336057 SEC24BO95487 1268 aa18.52■□□□□ 0.55
HDAC5-202ENST00000336057 TTLL5Q6EMB2 1281 aa18.52■□□□□ 0.55
HDAC5-202ENST00000336057 ZNF518AQ6AHZ1 1483 aa18.52■□□□□ 0.55
HDAC5-202ENST00000336057 BRPF1P55201 1214 aaPredicted RBP18.51■□□□□ 0.55
HDAC5-202ENST00000336057 CBFA2T2O43439 604 aa18.51■□□□□ 0.55
HDAC5-202ENST00000336057 PDE1AP54750 535 aa18.51■□□□□ 0.55
HDAC5-202ENST00000336057 STX6O43752 255 aa18.51■□□□□ 0.55
HDAC5-202ENST00000336057 TMX3Q96JJ7 454 aa18.51■□□□□ 0.55
HDAC5-202ENST00000336057 INSRP06213 1382 aa18.51■□□□□ 0.55
HDAC5-202ENST00000336057 PI4KAP2A4QPH2 592 aa18.5■□□□□ 0.55
HDAC5-202ENST00000336057 PI4KAP1Q8N8J0 262 aa18.5■□□□□ 0.55
HDAC5-202ENST00000336057 KDM2BQ8NHM5 1336 aa18.5■□□□□ 0.55
HDAC5-202ENST00000336057 ASXL2Q76L83 1435 aa18.5■□□□□ 0.55
HDAC5-202ENST00000336057 LARP6Q9BRS8 491 aaKnown RBP18.5■□□□□ 0.55
HDAC5-202ENST00000336057 XRCC6P12956 609 aaKnown RBP eCLIP18.5■□□□□ 0.55
HDAC5-202ENST00000336057 NUP133Q8WUM0 1156 aa18.5■□□□□ 0.55
HDAC5-202ENST00000336057 RUFY1Q96T51 708 aa18.5■□□□□ 0.55
HDAC5-202ENST00000336057 USP25Q9UHP3 1055 aa18.49■□□□□ 0.55
HDAC5-202ENST00000336057 STK11IPQ8N1F8 1099 aa18.49■□□□□ 0.55
HDAC5-202ENST00000336057 CCDC85AQ96PX6 553 aaPredicted RBP18.49■□□□□ 0.55
HDAC5-202ENST00000336057 SPATA31E1Q6ZUB1 1445 aa18.49■□□□□ 0.55
HDAC5-202ENST00000336057 HMGB1P09429 215 aaKnown RBP18.49■□□□□ 0.55
HDAC5-202ENST00000336057 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
HDAC5-202ENST00000336057 MAP3K2Q9Y2U5 619 aa18.49■□□□□ 0.55
HDAC5-202ENST00000336057 IDH1O75874 414 aaKnown RBP18.48■□□□□ 0.55
HDAC5-202ENST00000336057 TSPYL6Q8N831 410 aa18.48■□□□□ 0.55
HDAC5-202ENST00000336057 RHPN1Q8TCX5 695 aa18.48■□□□□ 0.55
HDAC5-202ENST00000336057 AK7Q96M32 723 aa18.48■□□□□ 0.55
HDAC5-202ENST00000336057 AKAP2Q9Y2D5 859 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms