RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 UBR3Q6ZT12 1888 aa20.05■□□□□ 0.8
KATNA1-201ENST00000335643 CABP4P57796 275 aa20.04■□□□□ 0.8
KATNA1-201ENST00000335643 ITPK1Q13572 414 aa20.04■□□□□ 0.8
KATNA1-201ENST00000335643 NFATC2IPQ8NCF5 419 aa20.04■□□□□ 0.8
KATNA1-201ENST00000335643 RSPH6AQ9H0K4 717 aa20.04■□□□□ 0.8
KATNA1-201ENST00000335643 MRC1P22897 1456 aa20.04■□□□□ 0.8
KATNA1-201ENST00000335643 COL24A1Q17RW2 1714 aa20.04■□□□□ 0.8
KATNA1-201ENST00000335643 SMIM5Q71RC9 77 aa20.04■□□□□ 0.8
KATNA1-201ENST00000335643 LINC00116Q8NCU8 138 aa20.04■□□□□ 0.8
KATNA1-201ENST00000335643 PHACTR3Q96KR7 559 aa20.04■□□□□ 0.8
KATNA1-201ENST00000335643 SGIP1Q9BQI5 828 aa20.04■□□□□ 0.8
KATNA1-201ENST00000335643 ZNF831Q5JPB2 1677 aa20.03■□□□□ 0.8
KATNA1-201ENST00000335643 COL5A3P25940 1745 aaPredicted RBP20.03■□□□□ 0.8
KATNA1-201ENST00000335643 ZEB1P37275 1124 aaPredicted RBP20.03■□□□□ 0.8
KATNA1-201ENST00000335643 MTFR1LQ9H019 292 aa20.03■□□□□ 0.8
KATNA1-201ENST00000335643 PRKAR2BP31323 418 aa20.02■□□□□ 0.8
KATNA1-201ENST00000335643 RNMTO43148 476 aaKnown RBP20.01■□□□□ 0.79
KATNA1-201ENST00000335643 U2AF1L5P0DN76 240 aaPredicted RBP20.01■□□□□ 0.79
KATNA1-201ENST00000335643 U2AF1Q01081 240 aaKnown RBP eCLIP20.01■□□□□ 0.79
KATNA1-201ENST00000335643 COL23A1Q86Y22 540 aaPredicted RBP20.01■□□□□ 0.79
KATNA1-201ENST00000335643 ATP6V1AP38606 617 aa20■□□□□ 0.79
KATNA1-201ENST00000335643 TJP1Q07157 1748 aa20■□□□□ 0.79
KATNA1-201ENST00000335643 SLC52A2Q9HAB3 445 aa20■□□□□ 0.79
KATNA1-201ENST00000335643 SIPA1L3O60292 1781 aaPredicted RBP19.99■□□□□ 0.79
KATNA1-201ENST00000335643 RBM42Q9BTD8 480 aaKnown RBP19.99■□□□□ 0.79
KATNA1-201ENST00000335643 NUDCQ9Y266 331 aa19.99■□□□□ 0.79
KATNA1-201ENST00000335643 MAP3K5Q99683 1374 aa19.98■□□□□ 0.79
KATNA1-201ENST00000335643 PPP1R1BQ9UD71 204 aaPredicted RBP19.98■□□□□ 0.79
KATNA1-201ENST00000335643 CICQ96RK0 1608 aaPredicted RBP19.98■□□□□ 0.79
KATNA1-201ENST00000335643 PTCD1O75127 700 aaKnown RBP19.97■□□□□ 0.79
KATNA1-201ENST00000335643 IL17REQ8NFR9 667 aa19.97■□□□□ 0.79
KATNA1-201ENST00000335643 MYH14Q7Z406 1995 aaKnown RBP19.97■□□□□ 0.79
KATNA1-201ENST00000335643 SLC39A6Q13433 755 aa19.96■□□□□ 0.79
KATNA1-201ENST00000335643 RALBP1Q15311 655 aa19.96■□□□□ 0.79
KATNA1-201ENST00000335643 GAS2L2Q8NHY3 880 aa19.96■□□□□ 0.79
KATNA1-201ENST00000335643 AK7Q96M32 723 aa19.96■□□□□ 0.79
KATNA1-201ENST00000335643 UBR2Q8IWV8 1755 aa19.96■□□□□ 0.79
KATNA1-201ENST00000335643 KCPQ6ZWJ8 1503 aa19.96■□□□□ 0.79
KATNA1-201ENST00000335643 PHF14O94880 888 aa19.95■□□□□ 0.78
KATNA1-201ENST00000335643 GNAT3A8MTJ3 354 aa19.95■□□□□ 0.78
KATNA1-201ENST00000335643 FCHSD2O94868 740 aa19.95■□□□□ 0.78
KATNA1-201ENST00000335643 SLC16A10Q8TF71 515 aa19.95■□□□□ 0.78
KATNA1-201ENST00000335643 MSH5O43196 834 aa19.94■□□□□ 0.78
KATNA1-201ENST00000335643 DLG5Q8TDM6 1919 aa19.94■□□□□ 0.78
KATNA1-201ENST00000335643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.93■□□□□ 0.78
KATNA1-201ENST00000335643 MSL1Q68DK7 614 aa19.93■□□□□ 0.78
KATNA1-201ENST00000335643 GNPATO15228 680 aa19.92■□□□□ 0.78
KATNA1-201ENST00000335643 CEMIPQ8WUJ3 1361 aa19.92■□□□□ 0.78
KATNA1-201ENST00000335643 MYBBP1AQ9BQG0 1328 aaKnown RBP19.92■□□□□ 0.78
KATNA1-201ENST00000335643 FHDC1Q9C0D6 1143 aaPredicted RBP19.91■□□□□ 0.78
KATNA1-201ENST00000335643 C4AP0C0L4 1744 aa19.91■□□□□ 0.78
KATNA1-201ENST00000335643 ARXQ96QS3 562 aa19.91■□□□□ 0.78
KATNA1-201ENST00000335643 PLEKHF1Q96S99 279 aa19.91■□□□□ 0.78
KATNA1-201ENST00000335643 SSFA2P28290 1259 aa19.9■□□□□ 0.78
KATNA1-201ENST00000335643 FLAD1Q8NFF5 587 aa19.89■□□□□ 0.77
KATNA1-201ENST00000335643 PRKRIP1Q9H875 184 aaPredicted RBP19.89■□□□□ 0.77
KATNA1-201ENST00000335643 CNTNAP4Q9C0A0 1308 aa19.89■□□□□ 0.77
KATNA1-201ENST00000335643 HMGB2P26583 209 aaKnown RBP19.88■□□□□ 0.77
KATNA1-201ENST00000335643 DCTN1Q14203 1278 aa19.88■□□□□ 0.77
KATNA1-201ENST00000335643 MCM10Q7L590 875 aa19.88■□□□□ 0.77
KATNA1-201ENST00000335643 DNAJC10Q8IXB1 793 aa19.88■□□□□ 0.77
KATNA1-201ENST00000335643 SYT17Q9BSW7 474 aa19.87■□□□□ 0.77
KATNA1-201ENST00000335643 CRKLP46109 303 aaKnown RBP19.87■□□□□ 0.77
KATNA1-201ENST00000335643 TEFQ10587 303 aa19.87■□□□□ 0.77
KATNA1-201ENST00000335643 RC3H1Q5TC82 1133 aaKnown RBP19.87■□□□□ 0.77
KATNA1-201ENST00000335643 POLD1P28340 1107 aa19.86■□□□□ 0.77
KATNA1-201ENST00000335643 KCNQ3O43525 872 aa19.85■□□□□ 0.77
KATNA1-201ENST00000335643 INTS5Q6P9B9 1019 aaKnown RBP19.85■□□□□ 0.77
KATNA1-201ENST00000335643 RTCBQ9Y3I0 505 aaKnown RBP19.85■□□□□ 0.77
KATNA1-201ENST00000335643 ZNF316A6NFI3 1004 aaPredicted RBP19.84■□□□□ 0.77
KATNA1-201ENST00000335643 ZNF790Q6PG37 636 aa19.84■□□□□ 0.77
KATNA1-201ENST00000335643 RPS6KA4O75676 772 aa19.83■□□□□ 0.77
KATNA1-201ENST00000335643 ARHGEF1Q92888 912 aaKnown RBP19.83■□□□□ 0.77
KATNA1-201ENST00000335643 ZNF496Q96IT1 587 aaPredicted RBP19.83■□□□□ 0.77
KATNA1-201ENST00000335643 CYP19A1P11511 503 aaPredicted RBP19.83■□□□□ 0.76
KATNA1-201ENST00000335643 TRAPPC3LQ5T215 181 aa19.82■□□□□ 0.76
KATNA1-201ENST00000335643 KLHL34Q8N239 644 aa19.82■□□□□ 0.76
KATNA1-201ENST00000335643 TTC5Q8N0Z6 440 aa19.81■□□□□ 0.76
KATNA1-201ENST00000335643 RTF1Q92541 710 aaKnown RBP19.81■□□□□ 0.76
KATNA1-201ENST00000335643 HEG1Q9ULI3 1381 aa19.8■□□□□ 0.76
KATNA1-201ENST00000335643 BTBD11A6QL63 1104 aa19.8■□□□□ 0.76
KATNA1-201ENST00000335643 NFE2L2Q16236 605 aa19.8■□□□□ 0.76
KATNA1-201ENST00000335643 VSIG10Q8N0Z9 540 aa19.8■□□□□ 0.76
KATNA1-201ENST00000335643 NLGN2Q8NFZ4 835 aa19.8■□□□□ 0.76
KATNA1-201ENST00000335643 THUMPD2Q9BTF0 503 aaKnown RBP19.8■□□□□ 0.76
KATNA1-201ENST00000335643 ZBTB1Q9Y2K1 713 aa19.8■□□□□ 0.76
KATNA1-201ENST00000335643 HTATSF1O43719 755 aaKnown RBP19.79■□□□□ 0.76
KATNA1-201ENST00000335643 CCDC87Q9NVE4 849 aa19.79■□□□□ 0.76
KATNA1-201ENST00000335643 KDM3BQ7LBC6 1761 aa19.79■□□□□ 0.76
KATNA1-201ENST00000335643 ADRA2BP18089 450 aa19.78■□□□□ 0.76
KATNA1-201ENST00000335643 CCDC146Q8IYE0 955 aa19.78■□□□□ 0.76
KATNA1-201ENST00000335643 SRP68Q9UHB9 627 aaKnown RBP19.78■□□□□ 0.76
KATNA1-201ENST00000335643 SOS1Q07889 1333 aaPredicted RBP19.78■□□□□ 0.76
KATNA1-201ENST00000335643 MAPK8IP3Q9UPT6 1336 aa19.78■□□□□ 0.76
KATNA1-201ENST00000335643 PRAMEF22A3QJZ6 481 aa19.78■□□□□ 0.76
KATNA1-201ENST00000335643 GYS1P13807 737 aa19.78■□□□□ 0.76
KATNA1-201ENST00000335643 NEFMP07197 916 aa19.77■□□□□ 0.76
KATNA1-201ENST00000335643 RFC4P35249 363 aa19.77■□□□□ 0.76
KATNA1-201ENST00000335643 MIS18AQ9NYP9 233 aa19.77■□□□□ 0.76
KATNA1-201ENST00000335643 CCDC184Q52MB2 194 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms