RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 HDGFL1Q5TGJ6 251 aa21.64■■□□□ 1.05
DDX28-201ENST00000332395 ZNF530Q6P9A1 599 aaPredicted RBP21.64■■□□□ 1.05
DDX28-201ENST00000332395 TBC1D9Q6ZT07 1266 aa21.64■■□□□ 1.05
DDX28-201ENST00000332395 SLKQ9H2G2 1235 aaPredicted RBP21.64■■□□□ 1.05
DDX28-201ENST00000332395 KDM3BQ7LBC6 1761 aa21.64■■□□□ 1.05
DDX28-201ENST00000332395 ANKRD24Q8TF21 1146 aa21.63■■□□□ 1.05
DDX28-201ENST00000332395 N4BP2Q86UW6 1770 aaPredicted RBP21.63■■□□□ 1.05
DDX28-201ENST00000332395 GNAI2P04899 355 aa21.63■■□□□ 1.05
DDX28-201ENST00000332395 AMOTQ4VCS5 1084 aa21.63■■□□□ 1.05
DDX28-201ENST00000332395 MST1RQ04912 1400 aa21.62■■□□□ 1.05
DDX28-201ENST00000332395 C16orf71Q8IYS4 520 aaPredicted RBP21.62■■□□□ 1.05
DDX28-201ENST00000332395 CAMTA1Q9Y6Y1 1673 aa21.61■■□□□ 1.05
DDX28-201ENST00000332395 EIF4A1P60842 406 aaKnown RBP21.61■■□□□ 1.05
DDX28-201ENST00000332395 ANTXR1Q9H6X2 564 aa21.61■■□□□ 1.05
DDX28-201ENST00000332395 PXDNLA1KZ92 1463 aa21.61■■□□□ 1.05
DDX28-201ENST00000332395 ALS2Q96Q42 1657 aa21.61■■□□□ 1.05
DDX28-201ENST00000332395 CDC45O75419 566 aa21.61■■□□□ 1.05
DDX28-201ENST00000332395 TTC22Q5TAA0 569 aa21.61■■□□□ 1.05
DDX28-201ENST00000332395 TEFQ10587 303 aa21.6■■□□□ 1.05
DDX28-201ENST00000332395 AXIN2Q9Y2T1 843 aa21.6■■□□□ 1.05
DDX28-201ENST00000332395 PXDNQ92626 1479 aa21.6■■□□□ 1.05
DDX28-201ENST00000332395 APBB1O00213 710 aa21.6■■□□□ 1.05
DDX28-201ENST00000332395 SMARCA5O60264 1052 aaPredicted RBP21.6■■□□□ 1.05
DDX28-201ENST00000332395 FRAT2O75474 233 aaPredicted RBP21.6■■□□□ 1.05
DDX28-201ENST00000332395 GNAI3P08754 354 aa21.6■■□□□ 1.05
DDX28-201ENST00000332395 OTUD7AQ8TE49 926 aaPredicted RBP21.6■■□□□ 1.05
DDX28-201ENST00000332395 TMEM94Q12767 1356 aa21.59■■□□□ 1.05
DDX28-201ENST00000332395 HOXB7P09629 217 aa21.59■■□□□ 1.05
DDX28-201ENST00000332395 ATF3P18847 181 aa21.59■■□□□ 1.05
DDX28-201ENST00000332395 MPRIPQ6WCQ1 1025 aa21.59■■□□□ 1.05
DDX28-201ENST00000332395 STRCP1A6NGW2 1772 aa21.58■■□□□ 1.05
DDX28-201ENST00000332395 C1orf141Q5JVX7 400 aa21.58■■□□□ 1.04
DDX28-201ENST00000332395 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
DDX28-201ENST00000332395 PHAXQ9H814 394 aaKnown RBP21.57■■□□□ 1.04
DDX28-201ENST00000332395 RGPD5Q99666 1765 aa21.57■■□□□ 1.04
DDX28-201ENST00000332395 OVOS2A0A0G2JMS6 1433 aa21.57■■□□□ 1.04
DDX28-201ENST00000332395 DCCP43146 1447 aa21.57■■□□□ 1.04
DDX28-201ENST00000332395 KCNQ3O43525 872 aa21.57■■□□□ 1.04
DDX28-201ENST00000332395 EIF2S2P20042 333 aaKnown RBP21.57■■□□□ 1.04
DDX28-201ENST00000332395 RTN4Q9NQC3 1192 aaKnown RBP21.57■■□□□ 1.04
DDX28-201ENST00000332395 RNMTO43148 476 aaKnown RBP21.56■■□□□ 1.04
DDX28-201ENST00000332395 ERBB3P21860 1342 aa21.55■■□□□ 1.04
DDX28-201ENST00000332395 HSCBQ8IWL3 235 aa21.55■■□□□ 1.04
DDX28-201ENST00000332395 CHMP4AQ9BY43 222 aa21.55■■□□□ 1.04
DDX28-201ENST00000332395 ZC3H6P61129 1189 aaKnown RBP21.54■■□□□ 1.04
DDX28-201ENST00000332395 CHPF2Q9P2E5 772 aa21.54■■□□□ 1.04
DDX28-201ENST00000332395 NCOA3Q9Y6Q9 1424 aa21.54■■□□□ 1.04
DDX28-201ENST00000332395 SPRYD3Q8NCJ5 442 aa21.53■■□□□ 1.04
DDX28-201ENST00000332395 KIF2CQ99661 725 aa21.53■■□□□ 1.04
DDX28-201ENST00000332395 USP44Q9H0E7 712 aa21.53■■□□□ 1.04
DDX28-201ENST00000332395 EIF5BO60841 1220 aaKnown RBP21.53■■□□□ 1.04
DDX28-201ENST00000332395 ATP8B2P98198 1209 aa21.53■■□□□ 1.04
DDX28-201ENST00000332395 SNX21Q969T3 373 aa21.53■■□□□ 1.04
DDX28-201ENST00000332395 EXOC6BQ9Y2D4 811 aa21.53■■□□□ 1.04
DDX28-201ENST00000332395 LRRFIP2Q9Y608 721 aaKnown RBP21.53■■□□□ 1.04
DDX28-201ENST00000332395 PNMA6EA0A0J9YXQ4 647 aa21.52■■□□□ 1.04
DDX28-201ENST00000332395 GSE1Q14687 1217 aa21.52■■□□□ 1.04
DDX28-201ENST00000332395 DDX17Q92841 729 aaKnown RBP21.52■■□□□ 1.04
DDX28-201ENST00000332395 SDSP20132 328 aa21.51■■□□□ 1.03
DDX28-201ENST00000332395 UBTFL1P0CB47 393 aaPredicted RBP21.51■■□□□ 1.03
DDX28-201ENST00000332395 LMTK3Q96Q04 1460 aa21.51■■□□□ 1.03
DDX28-201ENST00000332395 SRCIN1Q9C0H9 1055 aa21.5■■□□□ 1.03
DDX28-201ENST00000332395 OSBPL3Q9H4L5 887 aa21.5■■□□□ 1.03
DDX28-201ENST00000332395 SIPA1L3O60292 1781 aaPredicted RBP21.49■■□□□ 1.03
DDX28-201ENST00000332395 CADPS2Q86UW7 1296 aa21.49■■□□□ 1.03
DDX28-201ENST00000332395 ADAMTS7Q9UKP4 1686 aa21.49■■□□□ 1.03
DDX28-201ENST00000332395 NPHP3Q7Z494 1330 aa21.49■■□□□ 1.03
DDX28-201ENST00000332395 PDE1AP54750 535 aa21.48■■□□□ 1.03
DDX28-201ENST00000332395 LRRCC1Q9C099 1032 aa21.48■■□□□ 1.03
DDX28-201ENST00000332395 IBTKQ9P2D0 1353 aaPredicted RBP21.48■■□□□ 1.03
DDX28-201ENST00000332395 DNAAF4Q8WXU2 420 aa21.47■■□□□ 1.03
DDX28-201ENST00000332395 PI4KAP2A4QPH2 592 aa21.47■■□□□ 1.03
DDX28-201ENST00000332395 ANXA1P04083 346 aa21.47■■□□□ 1.03
DDX28-201ENST00000332395 CASC1Q6TDU7 716 aa21.47■■□□□ 1.03
DDX28-201ENST00000332395 PI4KAP1Q8N8J0 262 aa21.47■■□□□ 1.03
DDX28-201ENST00000332395 DBF4Q9UBU7 674 aaPredicted RBP21.47■■□□□ 1.03
DDX28-201ENST00000332395 HEG1Q9ULI3 1381 aa21.47■■□□□ 1.03
DDX28-201ENST00000332395 TNS3Q68CZ2 1445 aa21.46■■□□□ 1.03
DDX28-201ENST00000332395 GIGYF1O75420 1035 aaPredicted RBP21.46■■□□□ 1.03
DDX28-201ENST00000332395 RAPGEF4Q8WZA2 1011 aa21.46■■□□□ 1.03
DDX28-201ENST00000332395 NLRP2Q9NX02 1062 aa21.46■■□□□ 1.03
DDX28-201ENST00000332395 SALL3Q9BXA9 1300 aa21.46■■□□□ 1.03
DDX28-201ENST00000332395 BEND3Q5T5X7 828 aa21.46■■□□□ 1.03
DDX28-201ENST00000332395 COL18A1P39060 1754 aa21.45■■□□□ 1.02
DDX28-201ENST00000332395 HSPA2P54652 639 aa21.45■■□□□ 1.02
DDX28-201ENST00000332395 CHMP5Q9NZZ3 219 aa21.45■■□□□ 1.02
DDX28-201ENST00000332395 ADCY9O60503 1353 aa21.44■■□□□ 1.02
DDX28-201ENST00000332395 SSH3Q8TE77 659 aa21.44■■□□□ 1.02
DDX28-201ENST00000332395 CRYBG1Q9Y4K1 1723 aa21.44■■□□□ 1.02
DDX28-201ENST00000332395 CABLES1Q8TDN4 633 aa21.44■■□□□ 1.02
DDX28-201ENST00000332395 BRPF3Q9ULD4 1205 aa21.43■■□□□ 1.02
DDX28-201ENST00000332395 USP26Q9BXU7 913 aa21.43■■□□□ 1.02
DDX28-201ENST00000332395 HSP90AB1P08238 724 aaKnown RBP21.42■■□□□ 1.02
DDX28-201ENST00000332395 NBPF7P0C2Y1 421 aaPredicted RBP21.42■■□□□ 1.02
DDX28-201ENST00000332395 MX1P20591 662 aa21.42■■□□□ 1.02
DDX28-201ENST00000332395 RBM42Q9BTD8 480 aaKnown RBP21.42■■□□□ 1.02
DDX28-201ENST00000332395 PRAMEF22A3QJZ6 481 aa21.41■■□□□ 1.02
DDX28-201ENST00000332395 CD2BP2O95400 341 aaKnown RBP21.41■■□□□ 1.02
DDX28-201ENST00000332395 TATP17735 454 aaPredicted RBP21.41■■□□□ 1.02
DDX28-201ENST00000332395 PPP1R42Q7Z4L9 355 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms