RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 SIPA1L3O60292 1781 aaPredicted RBP22.32■■□□□ 1.16
CLDN6-201ENST00000328796 NFE2L2Q16236 605 aa22.32■■□□□ 1.16
CLDN6-201ENST00000328796 NBPF14Q5TI25 921 aa22.32■■□□□ 1.16
CLDN6-201ENST00000328796 HTATSF1O43719 755 aaKnown RBP22.31■■□□□ 1.16
CLDN6-201ENST00000328796 CCNL1Q9UK58 526 aaPredicted RBP22.31■■□□□ 1.16
CLDN6-201ENST00000328796 TAF1LQ8IZX4 1826 aa22.3■■□□□ 1.16
CLDN6-201ENST00000328796 ANO8Q9HCE9 1232 aaPredicted RBP22.3■■□□□ 1.16
CLDN6-201ENST00000328796 MRS2Q9HD23 443 aa22.3■■□□□ 1.16
CLDN6-201ENST00000328796 RUNDC1Q96C34 613 aa22.29■■□□□ 1.16
CLDN6-201ENST00000328796 ZNF831Q5JPB2 1677 aa22.29■■□□□ 1.16
CLDN6-201ENST00000328796 KCNQ4P56696 695 aa22.28■■□□□ 1.16
CLDN6-201ENST00000328796 RTF1Q92541 710 aaKnown RBP22.28■■□□□ 1.16
CLDN6-201ENST00000328796 C5P01031 1676 aa22.28■■□□□ 1.16
CLDN6-201ENST00000328796 LOC102724428A0A0B4J2F2 783 aa22.27■■□□□ 1.16
CLDN6-201ENST00000328796 SIK1P57059 783 aa22.27■■□□□ 1.16
CLDN6-201ENST00000328796 TEFQ10587 303 aa22.27■■□□□ 1.16
CLDN6-201ENST00000328796 R3HDM1Q15032 1099 aaKnown RBP22.27■■□□□ 1.16
CLDN6-201ENST00000328796 CCDC146Q8IYE0 955 aa22.27■■□□□ 1.16
CLDN6-201ENST00000328796 PNISRQ8TF01 805 aaKnown RBP22.27■■□□□ 1.16
CLDN6-201ENST00000328796 PSDA5PKW4 1024 aaPredicted RBP22.26■■□□□ 1.15
CLDN6-201ENST00000328796 MCM10Q7L590 875 aa22.26■■□□□ 1.15
CLDN6-201ENST00000328796 STK32BQ9NY57 414 aa22.26■■□□□ 1.15
CLDN6-201ENST00000328796 TMPOP42166 694 aaKnown RBP22.25■■□□□ 1.15
CLDN6-201ENST00000328796 SLC15A2Q16348 729 aa22.25■■□□□ 1.15
CLDN6-201ENST00000328796 HMGB2P26583 209 aaKnown RBP22.25■■□□□ 1.15
CLDN6-201ENST00000328796 DCTN1Q14203 1278 aa22.25■■□□□ 1.15
CLDN6-201ENST00000328796 AKT1S1Q96B36 256 aa22.25■■□□□ 1.15
CLDN6-201ENST00000328796 UBR2Q8IWV8 1755 aa22.24■■□□□ 1.15
CLDN6-201ENST00000328796 ZNF827Q17R98 1081 aa22.24■■□□□ 1.15
CLDN6-201ENST00000328796 SLC4A9Q96Q91 983 aa22.24■■□□□ 1.15
CLDN6-201ENST00000328796 CICQ96RK0 1608 aaPredicted RBP22.23■■□□□ 1.15
CLDN6-201ENST00000328796 SLC39A6Q13433 755 aa22.23■■□□□ 1.15
CLDN6-201ENST00000328796 QSER1Q2KHR3 1735 aa22.23■■□□□ 1.15
CLDN6-201ENST00000328796 RBM42Q9BTD8 480 aaKnown RBP22.23■■□□□ 1.15
CLDN6-201ENST00000328796 KCPQ6ZWJ8 1503 aa22.22■■□□□ 1.15
CLDN6-201ENST00000328796 ATP6V1AP38606 617 aa22.22■■□□□ 1.15
CLDN6-201ENST00000328796 RIPK4P57078 832 aa22.22■■□□□ 1.15
CLDN6-201ENST00000328796 ITPK1Q13572 414 aa22.22■■□□□ 1.15
CLDN6-201ENST00000328796 TUBGCP6Q96RT7 1819 aa22.21■■□□□ 1.15
CLDN6-201ENST00000328796 C4BP0C0L5 1744 aa22.21■■□□□ 1.15
CLDN6-201ENST00000328796 PTCD1O75127 700 aaKnown RBP22.21■■□□□ 1.15
CLDN6-201ENST00000328796 COL5A3P25940 1745 aaPredicted RBP22.21■■□□□ 1.15
CLDN6-201ENST00000328796 CASZ1Q86V15 1759 aa22.19■■□□□ 1.14
CLDN6-201ENST00000328796 TJP1Q07157 1748 aa22.19■■□□□ 1.14
CLDN6-201ENST00000328796 LMOD3Q0VAK6 560 aa22.19■■□□□ 1.14
CLDN6-201ENST00000328796 LINC00116Q8NCU8 138 aa22.19■■□□□ 1.14
CLDN6-201ENST00000328796 RRP7AQ9Y3A4 280 aaKnown RBP22.19■■□□□ 1.14
CLDN6-201ENST00000328796 DIEXFQ68CQ4 756 aaKnown RBP22.18■■□□□ 1.14
CLDN6-201ENST00000328796 ZNF790Q6PG37 636 aa22.18■■□□□ 1.14
CLDN6-201ENST00000328796 BTBD11A6QL63 1104 aa22.17■■□□□ 1.14
CLDN6-201ENST00000328796 APAF1O14727 1248 aa22.17■■□□□ 1.14
CLDN6-201ENST00000328796 TAF7Q15545 349 aaPredicted RBP22.17■■□□□ 1.14
CLDN6-201ENST00000328796 THUMPD2Q9BTF0 503 aaKnown RBP22.17■■□□□ 1.14
CLDN6-201ENST00000328796 UBR3Q6ZT12 1888 aa22.17■■□□□ 1.14
CLDN6-201ENST00000328796 NEUROD2Q15784 382 aa22.16■■□□□ 1.14
CLDN6-201ENST00000328796 TTC5Q8N0Z6 440 aa22.16■■□□□ 1.14
CLDN6-201ENST00000328796 TRIM35Q9UPQ4 493 aa22.16■■□□□ 1.14
CLDN6-201ENST00000328796 MYH14Q7Z406 1995 aaKnown RBP22.16■■□□□ 1.14
CLDN6-201ENST00000328796 VSIG10Q8N0Z9 540 aa22.15■■□□□ 1.14
CLDN6-201ENST00000328796 TFCP2L1Q9NZI6 479 aa22.15■■□□□ 1.14
CLDN6-201ENST00000328796 KDM3BQ7LBC6 1761 aa22.15■■□□□ 1.14
CLDN6-201ENST00000328796 CCER2I3L3R5 266 aa22.14■■□□□ 1.14
CLDN6-201ENST00000328796 KCNQ3O43525 872 aa22.14■■□□□ 1.14
CLDN6-201ENST00000328796 ZNF496Q96IT1 587 aaPredicted RBP22.14■■□□□ 1.14
CLDN6-201ENST00000328796 PNPLA7Q6ZV29 1317 aa22.14■■□□□ 1.13
CLDN6-201ENST00000328796 PDGFDQ9GZP0 370 aaPredicted RBP22.13■■□□□ 1.13
CLDN6-201ENST00000328796 CNTNAP4Q9C0A0 1308 aa22.13■■□□□ 1.13
CLDN6-201ENST00000328796 RC3H1Q5TC82 1133 aaKnown RBP22.12■■□□□ 1.13
CLDN6-201ENST00000328796 AK7Q96M32 723 aa22.12■■□□□ 1.13
CLDN6-201ENST00000328796 HEG1Q9ULI3 1381 aa22.12■■□□□ 1.13
CLDN6-201ENST00000328796 DNAJC10Q8IXB1 793 aa22.12■■□□□ 1.13
CLDN6-201ENST00000328796 FMNL2Q96PY5 1086 aa22.12■■□□□ 1.13
CLDN6-201ENST00000328796 FAM9BQ8IZU0 186 aa22.11■■□□□ 1.13
CLDN6-201ENST00000328796 AMIGO3Q86WK7 504 aa22.1■■□□□ 1.13
CLDN6-201ENST00000328796 MIS18AQ9NYP9 233 aa22.1■■□□□ 1.13
CLDN6-201ENST00000328796 LRP5O75197 1615 aa22.1■■□□□ 1.13
CLDN6-201ENST00000328796 CRKLP46109 303 aaKnown RBP22.09■■□□□ 1.13
CLDN6-201ENST00000328796 FLAD1Q8NFF5 587 aa22.09■■□□□ 1.13
CLDN6-201ENST00000328796 BABAM1Q9NWV8 329 aa22.09■■□□□ 1.13
CLDN6-201ENST00000328796 GNPATO15228 680 aa22.08■■□□□ 1.12
CLDN6-201ENST00000328796 CYP19A1P11511 503 aaPredicted RBP22.08■■□□□ 1.12
CLDN6-201ENST00000328796 SSFA2P28290 1259 aa22.08■■□□□ 1.12
CLDN6-201ENST00000328796 NCBP3Q53F19 620 aaKnown RBP22.08■■□□□ 1.12
CLDN6-201ENST00000328796 COL23A1Q86Y22 540 aaPredicted RBP22.08■■□□□ 1.12
CLDN6-201ENST00000328796 SLC16A10Q8TF71 515 aa22.07■■□□□ 1.12
CLDN6-201ENST00000328796 TEX13AQ9BXU3 409 aaPredicted RBP22.07■■□□□ 1.12
CLDN6-201ENST00000328796 RPS6KA4O75676 772 aa22.06■■□□□ 1.12
CLDN6-201ENST00000328796 INTS5Q6P9B9 1019 aaKnown RBP22.06■■□□□ 1.12
CLDN6-201ENST00000328796 MIER1Q8N108 512 aa22.06■■□□□ 1.12
CLDN6-201ENST00000328796 CCDC87Q9NVE4 849 aa22.06■■□□□ 1.12
CLDN6-201ENST00000328796 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.05■■□□□ 1.12
CLDN6-201ENST00000328796 CCDC27Q2M243 656 aa22.05■■□□□ 1.12
CLDN6-201ENST00000328796 TSPYL4Q9UJ04 414 aa22.05■■□□□ 1.12
CLDN6-201ENST00000328796 RTCBQ9Y3I0 505 aaKnown RBP22.05■■□□□ 1.12
CLDN6-201ENST00000328796 COL24A1Q17RW2 1714 aa22.05■■□□□ 1.12
CLDN6-201ENST00000328796 CHL1O00533 1208 aa22.04■■□□□ 1.12
CLDN6-201ENST00000328796 ZBTB7AO95365 584 aa22.04■■□□□ 1.12
CLDN6-201ENST00000328796 SNRPA1P09661 255 aaKnown RBP22.04■■□□□ 1.12
CLDN6-201ENST00000328796 EIF4A1P60842 406 aaKnown RBP22.04■■□□□ 1.12
CLDN6-201ENST00000328796 SMIM5Q71RC9 77 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms