RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 HTATSF1O43719 755 aaKnown RBP11.17□□□□□ -0.62
NPIPA1-201ENST00000328085 TPM4P67936 248 aa11.17□□□□□ -0.62
NPIPA1-201ENST00000328085 BMS1Q14692 1282 aaKnown RBP11.17□□□□□ -0.62
NPIPA1-201ENST00000328085 IQUBQ8NA54 791 aa11.17□□□□□ -0.62
NPIPA1-201ENST00000328085 KIF1BPQ96EK5 621 aa11.17□□□□□ -0.62
NPIPA1-201ENST00000328085 RBSNQ9H1K0 784 aa11.17□□□□□ -0.62
NPIPA1-201ENST00000328085 JRKLQ9Y4A0 524 aa11.17□□□□□ -0.62
NPIPA1-201ENST00000328085 E9PCH4 1651 aa11.17□□□□□ -0.62
NPIPA1-201ENST00000328085 RGS12O14924 1447 aa11.17□□□□□ -0.62
NPIPA1-201ENST00000328085 SEC24BO95487 1268 aa11.16□□□□□ -0.62
NPIPA1-201ENST00000328085 ATP2B1P20020 1258 aa11.16□□□□□ -0.62
NPIPA1-201ENST00000328085 ATP6V1AP38606 617 aa11.16□□□□□ -0.62
NPIPA1-201ENST00000328085 HNRNPH2P55795 449 aaKnown RBP11.16□□□□□ -0.62
NPIPA1-201ENST00000328085 CDCA8Q53HL2 280 aa11.16□□□□□ -0.62
NPIPA1-201ENST00000328085 FAM43BQ6ZT52 329 aaPredicted RBP11.16□□□□□ -0.62
NPIPA1-201ENST00000328085 ZNF592Q92610 1267 aa11.16□□□□□ -0.62
NPIPA1-201ENST00000328085 CWC22Q9HCG8 908 aaKnown RBP11.16□□□□□ -0.62
NPIPA1-201ENST00000328085 SH3BP1Q9Y3L3 701 aa11.16□□□□□ -0.62
NPIPA1-201ENST00000328085 EID1Q9Y6B2 187 aa11.16□□□□□ -0.62
NPIPA1-201ENST00000328085 COL16A1Q07092 1604 aaPredicted RBP11.16□□□□□ -0.62
NPIPA1-201ENST00000328085 BAG4O95429 457 aaKnown RBP11.15□□□□□ -0.62
NPIPA1-201ENST00000328085 JMYQ8N9B5 988 aa11.15□□□□□ -0.62
NPIPA1-201ENST00000328085 TBC1D22AQ8WUA7 517 aa11.15□□□□□ -0.62
NPIPA1-201ENST00000328085 NOL10Q9BSC4 688 aaKnown RBP11.15□□□□□ -0.62
NPIPA1-201ENST00000328085 CXorf56Q9H5V9 222 aa11.15□□□□□ -0.62
NPIPA1-201ENST00000328085 QTRT2Q9H974 415 aaKnown RBP11.15□□□□□ -0.62
NPIPA1-201ENST00000328085 USP25Q9UHP3 1055 aa11.15□□□□□ -0.62
NPIPA1-201ENST00000328085 FYCO1Q9BQS8 1478 aa11.14□□□□□ -0.63
NPIPA1-201ENST00000328085 KLHL33A6NCF5 533 aa11.14□□□□□ -0.63
NPIPA1-201ENST00000328085 NCBP1Q09161 790 aaKnown RBP11.14□□□□□ -0.63
NPIPA1-201ENST00000328085 FAM50AQ14320 339 aaKnown RBP11.14□□□□□ -0.63
NPIPA1-201ENST00000328085 C11orf91Q3C1V1 193 aa11.14□□□□□ -0.63
NPIPA1-201ENST00000328085 CC2D2BQ6DHV5 1058 aa11.14□□□□□ -0.63
NPIPA1-201ENST00000328085 ITFG2Q969R8 447 aa11.14□□□□□ -0.63
NPIPA1-201ENST00000328085 PSD3Q9NYI0 1048 aa11.14□□□□□ -0.63
NPIPA1-201ENST00000328085 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.14□□□□□ -0.63
NPIPA1-201ENST00000328085 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
NPIPA1-201ENST00000328085 UBR1Q8IWV7 1749 aa11.14□□□□□ -0.63
NPIPA1-201ENST00000328085 MSH6P52701 1360 aa11.14□□□□□ -0.63
NPIPA1-201ENST00000328085 ARHGAP23Q9P227 1491 aa11.13□□□□□ -0.63
NPIPA1-201ENST00000328085 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
NPIPA1-201ENST00000328085 PLIN1O60240 522 aa11.13□□□□□ -0.63
NPIPA1-201ENST00000328085 ERCC3P19447 782 aa11.13□□□□□ -0.63
NPIPA1-201ENST00000328085 RBM6P78332 1123 aaKnown RBP11.13□□□□□ -0.63
NPIPA1-201ENST00000328085 TMED8Q6PL24 325 aaPredicted RBP11.13□□□□□ -0.63
NPIPA1-201ENST00000328085 PAIP2Q9BPZ3 127 aaKnown RBP11.13□□□□□ -0.63
NPIPA1-201ENST00000328085 ERVK-7P63135 1459 aa11.12□□□□□ -0.63
NPIPA1-201ENST00000328085 MYO1CO00159 1063 aa11.12□□□□□ -0.63
NPIPA1-201ENST00000328085 IVLP07476 585 aa11.12□□□□□ -0.63
NPIPA1-201ENST00000328085 USP8P40818 1118 aa11.12□□□□□ -0.63
NPIPA1-201ENST00000328085 MAGEA9P43362 315 aa11.12□□□□□ -0.63
NPIPA1-201ENST00000328085 SETDB1Q15047 1291 aa11.12□□□□□ -0.63
NPIPA1-201ENST00000328085 C20orf194Q5TEA3 1177 aa11.12□□□□□ -0.63
NPIPA1-201ENST00000328085 LRCH2Q5VUJ6 765 aa11.12□□□□□ -0.63
NPIPA1-201ENST00000328085 GPATCH11Q8N954 259 aa11.12□□□□□ -0.63
NPIPA1-201ENST00000328085 CLUAP1Q96AJ1 413 aa11.12□□□□□ -0.63
NPIPA1-201ENST00000328085 MBD5Q9P267 1494 aa11.12□□□□□ -0.63
NPIPA1-201ENST00000328085 CASKIN1Q8WXD9 1431 aa11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 SLIT1O75093 1534 aa11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 PRDM15P57071 1507 aaPredicted RBP11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 CPP00450 1065 aa11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 TTC31Q49AM3 519 aaPredicted RBP11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 MCTP2Q6DN12 878 aa11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 NUTM1Q86Y26 1132 aa11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 TRMT2AQ8IZ69 625 aaKnown RBP11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 GOLGA5Q8TBA6 731 aa11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 KIAA1524Q8TCG1 905 aa11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 RWDD1Q9H446 243 aaPredicted RBP11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 TSPY26PQ9H489 355 aa11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 SUFUQ9UMX1 484 aa11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 ANKRD36BQ8N2N9 1353 aa11.11□□□□□ -0.63
NPIPA1-201ENST00000328085 K7ELQ4 463 aaPredicted RBP11.1□□□□□ -0.63
NPIPA1-201ENST00000328085 NRDCO43847 1150 aa11.1□□□□□ -0.63
NPIPA1-201ENST00000328085 TUBB4AP04350 444 aa11.1□□□□□ -0.63
NPIPA1-201ENST00000328085 PRIM1P49642 420 aaKnown RBP11.1□□□□□ -0.63
NPIPA1-201ENST00000328085 DUSP27Q5VZP5 1158 aa11.1□□□□□ -0.63
NPIPA1-201ENST00000328085 STAG1Q8WVM7 1258 aa11.1□□□□□ -0.63
NPIPA1-201ENST00000328085 PPM1EQ8WY54 764 aa11.1□□□□□ -0.63
NPIPA1-201ENST00000328085 FAM107BQ9H098 131 aa11.1□□□□□ -0.63
NPIPA1-201ENST00000328085 LMBRD1Q9NUN5 540 aa11.1□□□□□ -0.63
NPIPA1-201ENST00000328085 MRVI1Q9Y6F6 885 aa11.1□□□□□ -0.63
NPIPA1-201ENST00000328085 NKTRP30414 1462 aaKnown RBP11.09□□□□□ -0.63
NPIPA1-201ENST00000328085 CCDC189A1A4V9 331 aa11.09□□□□□ -0.63
NPIPA1-201ENST00000328085 CTAGE5O15320 804 aa11.09□□□□□ -0.63
NPIPA1-201ENST00000328085 ANAPC15P60006 121 aa11.09□□□□□ -0.63
NPIPA1-201ENST00000328085 IRX1P78414 480 aaPredicted RBP11.09□□□□□ -0.63
NPIPA1-201ENST00000328085 L3MBTL2Q969R5 705 aa11.09□□□□□ -0.63
NPIPA1-201ENST00000328085 AK7Q96M32 723 aa11.09□□□□□ -0.63
NPIPA1-201ENST00000328085 C8orf37Q96NL8 207 aa11.09□□□□□ -0.63
NPIPA1-201ENST00000328085 ZNF521Q96K83 1311 aa11.09□□□□□ -0.63
NPIPA1-201ENST00000328085 SHPRHQ149N8 1683 aa11.08□□□□□ -0.64
NPIPA1-201ENST00000328085 KIF2AO00139 706 aaPredicted RBP11.08□□□□□ -0.64
NPIPA1-201ENST00000328085 CYP2E1P05181 493 aaPredicted RBP11.08□□□□□ -0.64
NPIPA1-201ENST00000328085 GOLGA2Q08379 1002 aa11.08□□□□□ -0.64
NPIPA1-201ENST00000328085 SRLQ86TD4 932 aa11.08□□□□□ -0.64
NPIPA1-201ENST00000328085 SKAP1Q86WV1 359 aa11.08□□□□□ -0.64
NPIPA1-201ENST00000328085 RNF217Q8TC41 542 aa11.08□□□□□ -0.64
NPIPA1-201ENST00000328085 MKL1Q969V6 931 aa11.08□□□□□ -0.64
NPIPA1-201ENST00000328085 UTP14AQ9BVJ6 771 aaKnown RBP11.08□□□□□ -0.64
NPIPA1-201ENST00000328085 ATG3Q9NT62 314 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms