RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 PLEKHG3A1L390 1219 aa12.55□□□□□ -0.4
SF3B2-201ENST00000322535 CCDC66A2RUB6 948 aa12.55□□□□□ -0.4
SF3B2-201ENST00000322535 C17orf53Q8N3J3 647 aaPredicted RBP12.55□□□□□ -0.4
SF3B2-201ENST00000322535 PDZRN3Q9UPQ7 1066 aa12.55□□□□□ -0.4
SF3B2-201ENST00000322535 KIF3AQ9Y496 699 aa12.55□□□□□ -0.4
SF3B2-201ENST00000322535 DIP2AQ14689 1571 aa12.55□□□□□ -0.4
SF3B2-201ENST00000322535 POLR3AO14802 1390 aaPredicted RBP12.55□□□□□ -0.4
SF3B2-201ENST00000322535 ZNF335Q9H4Z2 1342 aaPredicted RBP12.55□□□□□ -0.4
SF3B2-201ENST00000322535 GOLGA2Q08379 1002 aa12.55□□□□□ -0.4
SF3B2-201ENST00000322535 CLUAP1Q96AJ1 413 aa12.55□□□□□ -0.4
SF3B2-201ENST00000322535 EDC4Q6P2E9 1401 aaKnown RBP12.54□□□□□ -0.4
SF3B2-201ENST00000322535 KNDC1Q76NI1 1749 aa12.54□□□□□ -0.4
SF3B2-201ENST00000322535 PTCH1Q13635 1447 aa12.54□□□□□ -0.4
SF3B2-201ENST00000322535 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-201ENST00000322535 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
SF3B2-201ENST00000322535 THUMPD2Q9BTF0 503 aaKnown RBP12.53□□□□□ -0.4
SF3B2-201ENST00000322535 OS9Q13438 667 aaPredicted RBP12.53□□□□□ -0.4
SF3B2-201ENST00000322535 MCTP1Q6DN14 999 aa12.53□□□□□ -0.4
SF3B2-201ENST00000322535 PHACTR3Q96KR7 559 aa12.53□□□□□ -0.4
SF3B2-201ENST00000322535 USP6P35125 1406 aa12.53□□□□□ -0.4
SF3B2-201ENST00000322535 ERICH4A6NGS2 130 aa12.52□□□□□ -0.4
SF3B2-201ENST00000322535 PRKAR2BP31323 418 aa12.52□□□□□ -0.4
SF3B2-201ENST00000322535 KIAA2012Q0VF49 1180 aa12.52□□□□□ -0.4
SF3B2-201ENST00000322535 TMEM94Q12767 1356 aa12.52□□□□□ -0.4
SF3B2-201ENST00000322535 USP32Q8NFA0 1604 aa12.52□□□□□ -0.41
SF3B2-201ENST00000322535 HS1BP3Q53T59 392 aa12.52□□□□□ -0.41
SF3B2-201ENST00000322535 RUNDC1Q96C34 613 aa12.52□□□□□ -0.41
SF3B2-201ENST00000322535 EFCC1Q9HA90 598 aa12.52□□□□□ -0.41
SF3B2-201ENST00000322535 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.41
SF3B2-201ENST00000322535 NSD2O96028 1365 aa12.52□□□□□ -0.41
SF3B2-201ENST00000322535 ZNF142P52746 1687 aaPredicted RBP12.52□□□□□ -0.41
SF3B2-201ENST00000322535 CCDC39Q9UFE4 941 aa12.51□□□□□ -0.41
SF3B2-201ENST00000322535 CDC42BPGQ6DT37 1551 aa12.51□□□□□ -0.41
SF3B2-201ENST00000322535 TNNT3P45378 269 aaPredicted RBP12.51□□□□□ -0.41
SF3B2-201ENST00000322535 ZSCAN23Q3MJ62 389 aa12.51□□□□□ -0.41
SF3B2-201ENST00000322535 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
SF3B2-201ENST00000322535 MAP2P11137 1827 aaKnown RBP12.51□□□□□ -0.41
SF3B2-201ENST00000322535 XRN1Q8IZH2 1706 aaKnown RBP12.51□□□□□ -0.41
SF3B2-201ENST00000322535 RAB3GAP1Q15042 981 aa12.51□□□□□ -0.41
SF3B2-201ENST00000322535 RNF217Q8TC41 542 aa12.51□□□□□ -0.41
SF3B2-201ENST00000322535 BCL2L13Q9BXK5 485 aa12.51□□□□□ -0.41
SF3B2-201ENST00000322535 CHD2O14647 1828 aaKnown RBP12.5□□□□□ -0.41
SF3B2-201ENST00000322535 TPRNQ4KMQ1 711 aa12.5□□□□□ -0.41
SF3B2-201ENST00000322535 TSR2Q969E8 191 aaKnown RBP12.5□□□□□ -0.41
SF3B2-201ENST00000322535 ATF3P18847 181 aa12.5□□□□□ -0.41
SF3B2-201ENST00000322535 AMPHP49418 695 aa12.5□□□□□ -0.41
SF3B2-201ENST00000322535 GTF2A1P52655 376 aaPredicted RBP12.5□□□□□ -0.41
SF3B2-201ENST00000322535 CABLES1Q8TDN4 633 aa12.5□□□□□ -0.41
SF3B2-201ENST00000322535 RSPH14Q9UHP6 348 aa12.5□□□□□ -0.41
SF3B2-201ENST00000322535 CEP83Q9Y592 693 aa12.5□□□□□ -0.41
SF3B2-201ENST00000322535 MAP3K19Q56UN5 1328 aa12.5□□□□□ -0.41
SF3B2-201ENST00000322535 NOP2P46087 812 aaKnown RBP12.49□□□□□ -0.41
SF3B2-201ENST00000322535 BRPF1P55201 1214 aaPredicted RBP12.49□□□□□ -0.41
SF3B2-201ENST00000322535 DCTN1Q14203 1278 aa12.49□□□□□ -0.41
SF3B2-201ENST00000322535 USHBP1Q8N6Y0 703 aa12.49□□□□□ -0.41
SF3B2-201ENST00000322535 MYCBPQ99417 103 aaPredicted RBP12.49□□□□□ -0.41
SF3B2-201ENST00000322535 NALCNQ8IZF0 1738 aa12.49□□□□□ -0.41
SF3B2-201ENST00000322535 KLHL40Q2TBA0 621 aa12.49□□□□□ -0.41
SF3B2-201ENST00000322535 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.49□□□□□ -0.41
SF3B2-201ENST00000322535 PIK3R4Q99570 1358 aa12.49□□□□□ -0.41
SF3B2-201ENST00000322535 FAM83GA6ND36 823 aa12.48□□□□□ -0.41
SF3B2-201ENST00000322535 GABPB1Q06547 395 aaPredicted RBP12.48□□□□□ -0.41
SF3B2-201ENST00000322535 SULT6B1Q6IMI4 303 aa12.48□□□□□ -0.41
SF3B2-201ENST00000322535 EIF4A2Q14240 407 aaKnown RBP12.48□□□□□ -0.41
SF3B2-201ENST00000322535 C19orf44Q9H6X5 657 aa12.48□□□□□ -0.41
SF3B2-201ENST00000322535 PCDHB15Q9Y5E8 787 aa12.48□□□□□ -0.41
SF3B2-201ENST00000322535 SHPRHQ149N8 1683 aa12.48□□□□□ -0.41
SF3B2-201ENST00000322535 IL13P35225 146 aa12.48□□□□□ -0.41
SF3B2-201ENST00000322535 PDLIM2Q96JY6 352 aa12.48□□□□□ -0.41
SF3B2-201ENST00000322535 SMC4Q9NTJ3 1288 aa12.48□□□□□ -0.41
SF3B2-201ENST00000322535 CALCOCO1Q9P1Z2 691 aa12.48□□□□□ -0.41
SF3B2-201ENST00000322535 KIF20BQ96Q89 1820 aa12.47□□□□□ -0.41
SF3B2-201ENST00000322535 DNAJC21Q5F1R6 531 aaKnown RBP12.47□□□□□ -0.41
SF3B2-201ENST00000322535 GPATCH11Q8N954 259 aa12.47□□□□□ -0.41
SF3B2-201ENST00000322535 PLEKHF1Q96S99 279 aa12.47□□□□□ -0.41
SF3B2-201ENST00000322535 NCAPGQ9BPX3 1015 aa12.47□□□□□ -0.41
SF3B2-201ENST00000322535 TSPYL1Q9H0U9 437 aa12.47□□□□□ -0.41
SF3B2-201ENST00000322535 LMTK3Q96Q04 1460 aa12.47□□□□□ -0.41
SF3B2-201ENST00000322535 GOLIM4O00461 696 aa12.47□□□□□ -0.41
SF3B2-201ENST00000322535 BAG4O95429 457 aaKnown RBP12.47□□□□□ -0.41
SF3B2-201ENST00000322535 TNNT1P13805 278 aa12.47□□□□□ -0.41
SF3B2-201ENST00000322535 TMPOP42166 694 aaKnown RBP12.47□□□□□ -0.41
SF3B2-201ENST00000322535 ZC3H6P61129 1189 aaKnown RBP12.47□□□□□ -0.41
SF3B2-201ENST00000322535 ITSN1Q15811 1721 aa12.47□□□□□ -0.41
SF3B2-201ENST00000322535 SYCE3A1L190 88 aa12.46□□□□□ -0.41
SF3B2-201ENST00000322535 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.41
SF3B2-201ENST00000322535 GTF2F1P35269 517 aaKnown RBP eCLIP12.46□□□□□ -0.41
SF3B2-201ENST00000322535 SLFN5Q08AF3 891 aa12.46□□□□□ -0.41
SF3B2-201ENST00000322535 TOMM22Q9NS69 142 aa12.46□□□□□ -0.41
SF3B2-201ENST00000322535 TNNQ9UQP3 1299 aa12.46□□□□□ -0.41
SF3B2-201ENST00000322535 ZNF521Q96K83 1311 aa12.46□□□□□ -0.41
SF3B2-201ENST00000322535 ADGRL3Q9HAR2 1447 aa12.46□□□□□ -0.41
SF3B2-201ENST00000322535 CCDC172P0C7W6 258 aa12.46□□□□□ -0.42
SF3B2-201ENST00000322535 HMGN5P82970 282 aaKnown RBP12.46□□□□□ -0.42
SF3B2-201ENST00000322535 ZNF526Q8TF50 670 aaPredicted RBP12.46□□□□□ -0.42
SF3B2-201ENST00000322535 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
SF3B2-201ENST00000322535 CLSTN1O94985 981 aa12.45□□□□□ -0.42
SF3B2-201ENST00000322535 CD2BP2O95400 341 aaKnown RBP12.45□□□□□ -0.42
SF3B2-201ENST00000322535 MCM5P33992 734 aa12.45□□□□□ -0.42
SF3B2-201ENST00000322535 SATB1Q01826 763 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms