RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 BABAM1Q9NWV8 329 aa27.54■■■□□ 2
YBX1-201ENST00000321358 KCNQ2O43526 872 aa27.53■■■□□ 2
YBX1-201ENST00000321358 MYH16Q9H6N6 1097 aa27.53■■■□□ 2
YBX1-201ENST00000321358 TSPYL4Q9UJ04 414 aa27.53■■■□□ 2
YBX1-201ENST00000321358 BCL11BQ9C0K0 894 aaPredicted RBP27.52■■■□□ 2
YBX1-201ENST00000321358 DLG5Q8TDM6 1919 aa27.52■■■□□ 2
YBX1-201ENST00000321358 BRWD3Q6RI45 1802 aa27.51■■□□□ 1.99
YBX1-201ENST00000321358 E9PSI1 815 aa27.51■■□□□ 1.99
YBX1-201ENST00000321358 TTC5Q8N0Z6 440 aa27.51■■□□□ 1.99
YBX1-201ENST00000321358 CHL1O00533 1208 aa27.5■■□□□ 1.99
YBX1-201ENST00000321358 TRIM37O94972 964 aa27.5■■□□□ 1.99
YBX1-201ENST00000321358 MIS18AQ9NYP9 233 aa27.5■■□□□ 1.99
YBX1-201ENST00000321358 EP400Q96L91 3159 aa27.48■■□□□ 1.99
YBX1-201ENST00000321358 MRC1P22897 1456 aa27.48■■□□□ 1.99
YBX1-201ENST00000321358 ADAMTS7Q9UKP4 1686 aa27.47■■□□□ 1.99
YBX1-201ENST00000321358 ZNF853P0CG23 659 aa27.47■■□□□ 1.99
YBX1-201ENST00000321358 SMARCC1Q92922 1105 aaPredicted RBP27.47■■□□□ 1.99
YBX1-201ENST00000321358 ZNF790Q6PG37 636 aa27.46■■□□□ 1.99
YBX1-201ENST00000321358 SCN11AQ9UI33 1791 aa27.46■■□□□ 1.99
YBX1-201ENST00000321358 MBIPQ9NS73 344 aa27.46■■□□□ 1.99
YBX1-201ENST00000321358 SLFN5Q08AF3 891 aa27.45■■□□□ 1.98
YBX1-201ENST00000321358 SLC39A6Q13433 755 aa27.45■■□□□ 1.98
YBX1-201ENST00000321358 CDCA7LQ96GN5 454 aa27.45■■□□□ 1.98
YBX1-201ENST00000321358 ASAP1Q9ULH1 1129 aa27.45■■□□□ 1.98
YBX1-201ENST00000321358 KAT6BQ8WYB5 2073 aa27.44■■□□□ 1.98
YBX1-201ENST00000321358 SF3B2Q13435 895 aaKnown RBP27.44■■□□□ 1.98
YBX1-201ENST00000321358 SPINK5Q9NQ38 1064 aaPredicted RBP27.43■■□□□ 1.98
YBX1-201ENST00000321358 ATG3Q9NT62 314 aa27.43■■□□□ 1.98
YBX1-201ENST00000321358 DOT1LQ8TEK3 1739 aa27.43■■□□□ 1.98
YBX1-201ENST00000321358 PTF1AQ7RTS3 328 aa27.42■■□□□ 1.98
YBX1-201ENST00000321358 TSR2Q969E8 191 aaKnown RBP27.42■■□□□ 1.98
YBX1-201ENST00000321358 TOGARAM1Q9Y4F4 1720 aa27.41■■□□□ 1.98
YBX1-201ENST00000321358 FMNL2Q96PY5 1086 aa27.41■■□□□ 1.98
YBX1-201ENST00000321358 FANCIQ9NVI1 1328 aa27.4■■□□□ 1.98
YBX1-201ENST00000321358 PTCD1O75127 700 aaKnown RBP27.4■■□□□ 1.98
YBX1-201ENST00000321358 APBA3O96018 575 aa27.4■■□□□ 1.98
YBX1-201ENST00000321358 KCNQ3O43525 872 aa27.39■■□□□ 1.98
YBX1-201ENST00000321358 RBM42Q9BTD8 480 aaKnown RBP27.39■■□□□ 1.98
YBX1-201ENST00000321358 CCDC125Q86Z20 511 aa27.38■■□□□ 1.97
YBX1-201ENST00000321358 PALLDQ8WX93 1383 aa27.37■■□□□ 1.97
YBX1-201ENST00000321358 EIF4A1P60842 406 aaKnown RBP27.37■■□□□ 1.97
YBX1-201ENST00000321358 NHSQ6T4R5 1651 aa27.37■■□□□ 1.97
YBX1-201ENST00000321358 TRMT2AQ8IZ69 625 aaKnown RBP27.36■■□□□ 1.97
YBX1-201ENST00000321358 ZNF496Q96IT1 587 aaPredicted RBP27.36■■□□□ 1.97
YBX1-201ENST00000321358 DUSP27Q5VZP5 1158 aa27.36■■□□□ 1.97
YBX1-201ENST00000321358 ITGB4P16144 1822 aa27.34■■□□□ 1.97
YBX1-201ENST00000321358 LOC102724428A0A0B4J2F2 783 aa27.33■■□□□ 1.97
YBX1-201ENST00000321358 PLSCR1O15162 318 aa27.33■■□□□ 1.97
YBX1-201ENST00000321358 SNRPA1P09661 255 aaKnown RBP27.33■■□□□ 1.97
YBX1-201ENST00000321358 SIK1P57059 783 aa27.33■■□□□ 1.97
YBX1-201ENST00000321358 VSIG10Q8N0Z9 540 aa27.33■■□□□ 1.97
YBX1-201ENST00000321358 HMGB2P26583 209 aaKnown RBP27.32■■□□□ 1.96
YBX1-201ENST00000321358 EXOSC9Q06265 439 aaKnown RBP27.32■■□□□ 1.96
YBX1-201ENST00000321358 CHMP4AQ9BY43 222 aa27.32■■□□□ 1.96
YBX1-201ENST00000321358 BAG6P46379 1132 aa27.31■■□□□ 1.96
YBX1-201ENST00000321358 TEX13AQ9BXU3 409 aaPredicted RBP27.31■■□□□ 1.96
YBX1-201ENST00000321358 VIRMAQ69YN4 1812 aaKnown RBP27.31■■□□□ 1.96
YBX1-201ENST00000321358 SIPA1L3O60292 1781 aaPredicted RBP27.31■■□□□ 1.96
YBX1-201ENST00000321358 ATP6V1AP38606 617 aa27.31■■□□□ 1.96
YBX1-201ENST00000321358 HEG1Q9ULI3 1381 aa27.3■■□□□ 1.96
YBX1-201ENST00000321358 SBF2Q86WG5 1849 aa27.3■■□□□ 1.96
YBX1-201ENST00000321358 ELL2O00472 640 aaPredicted RBP27.3■■□□□ 1.96
YBX1-201ENST00000321358 GIGYF1O75420 1035 aaPredicted RBP27.3■■□□□ 1.96
YBX1-201ENST00000321358 SOS1Q07889 1333 aaPredicted RBP27.3■■□□□ 1.96
YBX1-201ENST00000321358 HOXB7P09629 217 aa27.29■■□□□ 1.96
YBX1-201ENST00000321358 TWISTNBQ3B726 338 aaPredicted RBP27.29■■□□□ 1.96
YBX1-201ENST00000321358 C8orf58Q8NAV2 365 aa27.29■■□□□ 1.96
YBX1-201ENST00000321358 CCNL1Q9UK58 526 aaPredicted RBP27.29■■□□□ 1.96
YBX1-201ENST00000321358 KRT24Q2M2I5 525 aa27.28■■□□□ 1.96
YBX1-201ENST00000321358 SLC27A3Q5K4L6 730 aa27.27■■□□□ 1.96
YBX1-201ENST00000321358 STARD3NLO95772 234 aa27.26■■□□□ 1.96
YBX1-201ENST00000321358 CT47B1P0C2W7 299 aaPredicted RBP27.26■■□□□ 1.96
YBX1-201ENST00000321358 BTAF1O14981 1849 aa27.26■■□□□ 1.95
YBX1-201ENST00000321358 TSPYL6Q8N831 410 aa27.25■■□□□ 1.95
YBX1-201ENST00000321358 KCPQ6ZWJ8 1503 aa27.25■■□□□ 1.95
YBX1-201ENST00000321358 EIF2S2P20042 333 aaKnown RBP27.24■■□□□ 1.95
YBX1-201ENST00000321358 TXNRD1Q16881 649 aa27.24■■□□□ 1.95
YBX1-201ENST00000321358 KDM3BQ7LBC6 1761 aa27.24■■□□□ 1.95
YBX1-201ENST00000321358 DNAJC10Q8IXB1 793 aa27.23■■□□□ 1.95
YBX1-201ENST00000321358 SLC4A9Q96Q91 983 aa27.23■■□□□ 1.95
YBX1-201ENST00000321358 PAPPAQ13219 1627 aa27.23■■□□□ 1.95
YBX1-201ENST00000321358 EN1Q05925 392 aaPredicted RBP27.22■■□□□ 1.95
YBX1-201ENST00000321358 HDGFL1Q5TGJ6 251 aa27.22■■□□□ 1.95
YBX1-201ENST00000321358 VAMP4O75379 141 aa27.21■■□□□ 1.95
YBX1-201ENST00000321358 ZNF428Q96B54 188 aa27.21■■□□□ 1.95
YBX1-201ENST00000321358 USP16Q9Y5T5 823 aa27.21■■□□□ 1.95
YBX1-201ENST00000321358 PRAMEF22A3QJZ6 481 aa27.21■■□□□ 1.95
YBX1-201ENST00000321358 CCDC30Q5VVM6 783 aa27.21■■□□□ 1.95
YBX1-201ENST00000321358 KCNQ4P56696 695 aa27.2■■□□□ 1.94
YBX1-201ENST00000321358 ITPK1Q13572 414 aa27.2■■□□□ 1.94
YBX1-201ENST00000321358 DEFB132Q7Z7B7 95 aa27.2■■□□□ 1.94
YBX1-201ENST00000321358 CAMKK2Q96RR4 588 aa27.2■■□□□ 1.94
YBX1-201ENST00000321358 STK31Q9BXU1 1019 aa27.19■■□□□ 1.94
YBX1-201ENST00000321358 EZH2Q15910 746 aaKnown RBP27.18■■□□□ 1.94
YBX1-201ENST00000321358 NECTIN2Q92692 538 aa27.18■■□□□ 1.94
YBX1-201ENST00000321358 CYP19A1P11511 503 aaPredicted RBP27.17■■□□□ 1.94
YBX1-201ENST00000321358 PROM2Q8N271 834 aa27.17■■□□□ 1.94
YBX1-201ENST00000321358 LRRC4BQ9NT99 713 aa27.16■■□□□ 1.94
YBX1-201ENST00000321358 UBR2Q8IWV8 1755 aa27.16■■□□□ 1.94
YBX1-201ENST00000321358 NPM2Q86SE8 214 aaKnown RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms