RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 RGPD2P0DJD1 1756 aa19.91■□□□□ 0.78
SHISA2-201ENST00000319420 CEP85Q6P2H3 762 aa19.91■□□□□ 0.78
SHISA2-201ENST00000319420 BRINP3Q76B58 766 aa19.9■□□□□ 0.78
SHISA2-201ENST00000319420 PXDNQ92626 1479 aa19.9■□□□□ 0.78
SHISA2-201ENST00000319420 GCC1Q96CN9 775 aa19.9■□□□□ 0.78
SHISA2-201ENST00000319420 USP35Q9P2H5 1018 aa19.9■□□□□ 0.78
SHISA2-201ENST00000319420 RNMTO43148 476 aaKnown RBP19.9■□□□□ 0.78
SHISA2-201ENST00000319420 EIF4A1P60842 406 aaKnown RBP19.9■□□□□ 0.78
SHISA2-201ENST00000319420 EXOC6BQ9Y2D4 811 aa19.89■□□□□ 0.78
SHISA2-201ENST00000319420 DEKP35659 375 aaKnown RBP19.89■□□□□ 0.77
SHISA2-201ENST00000319420 RTL5Q5HYW3 569 aaPredicted RBP19.89■□□□□ 0.77
SHISA2-201ENST00000319420 PIP4K2AP48426 406 aaPredicted RBP19.88■□□□□ 0.77
SHISA2-201ENST00000319420 AMOTQ4VCS5 1084 aa19.88■□□□□ 0.77
SHISA2-201ENST00000319420 AIMP1Q12904 312 aaKnown RBP19.88■□□□□ 0.77
SHISA2-201ENST00000319420 TSHZ3Q63HK5 1081 aa19.87■□□□□ 0.77
SHISA2-201ENST00000319420 ANKRD44Q8N8A2 993 aa19.87■□□□□ 0.77
SHISA2-201ENST00000319420 PRDM11Q9NQV5 511 aa19.87■□□□□ 0.77
SHISA2-201ENST00000319420 SLKQ9H2G2 1235 aaPredicted RBP19.87■□□□□ 0.77
SHISA2-201ENST00000319420 STRN4Q9NRL3 753 aa19.87■□□□□ 0.77
SHISA2-201ENST00000319420 SLAIN2Q9P270 581 aa19.87■□□□□ 0.77
SHISA2-201ENST00000319420 STRCP1A6NGW2 1772 aa19.87■□□□□ 0.77
SHISA2-201ENST00000319420 CCT4P50991 539 aaKnown RBP19.86■□□□□ 0.77
SHISA2-201ENST00000319420 UBE2Q2Q8WVN8 375 aa19.86■□□□□ 0.77
SHISA2-201ENST00000319420 PI4KAP2A4QPH2 592 aa19.86■□□□□ 0.77
SHISA2-201ENST00000319420 PROSER3Q2NL68 480 aa19.86■□□□□ 0.77
SHISA2-201ENST00000319420 PI4KAP1Q8N8J0 262 aa19.86■□□□□ 0.77
SHISA2-201ENST00000319420 NFATC2IPQ8NCF5 419 aa19.86■□□□□ 0.77
SHISA2-201ENST00000319420 TBC1D32Q96NH3 1257 aa19.85■□□□□ 0.77
SHISA2-201ENST00000319420 LRRFIP2Q9Y608 721 aaKnown RBP19.85■□□□□ 0.77
SHISA2-201ENST00000319420 CEMIPQ8WUJ3 1361 aa19.85■□□□□ 0.77
SHISA2-201ENST00000319420 TATP17735 454 aaPredicted RBP19.85■□□□□ 0.77
SHISA2-201ENST00000319420 DCTPP1Q9H773 170 aa19.84■□□□□ 0.77
SHISA2-201ENST00000319420 PNMA6EA0A0J9YXQ4 647 aa19.84■□□□□ 0.77
SHISA2-201ENST00000319420 GNAI2P04899 355 aa19.84■□□□□ 0.77
SHISA2-201ENST00000319420 C22orf23Q9BZE7 217 aa19.83■□□□□ 0.77
SHISA2-201ENST00000319420 SPATA31A3Q5VYP0 1347 aa19.83■□□□□ 0.77
SHISA2-201ENST00000319420 MYL6BP14649 208 aa19.83■□□□□ 0.76
SHISA2-201ENST00000319420 RPAP2Q8IXW5 612 aaPredicted RBP19.83■□□□□ 0.76
SHISA2-201ENST00000319420 TOM1L2Q6ZVM7 507 aa19.82■□□□□ 0.76
SHISA2-201ENST00000319420 ATP10DQ9P241 1426 aa19.82■□□□□ 0.76
SHISA2-201ENST00000319420 MED1Q15648 1581 aaPredicted RBP19.81■□□□□ 0.76
SHISA2-201ENST00000319420 UBTFL1P0CB47 393 aaPredicted RBP19.81■□□□□ 0.76
SHISA2-201ENST00000319420 NFKBIBQ15653 356 aa19.81■□□□□ 0.76
SHISA2-201ENST00000319420 PLEKHM2Q8IWE5 1019 aa19.81■□□□□ 0.76
SHISA2-201ENST00000319420 GSPT1P15170 499 aaKnown RBP19.8■□□□□ 0.76
SHISA2-201ENST00000319420 USP44Q9H0E7 712 aa19.8■□□□□ 0.76
SHISA2-201ENST00000319420 NBPF7P0C2Y1 421 aaPredicted RBP19.79■□□□□ 0.76
SHISA2-201ENST00000319420 RGPD5Q99666 1765 aa19.79■□□□□ 0.76
SHISA2-201ENST00000319420 SLIT3O75094 1523 aa19.79■□□□□ 0.76
SHISA2-201ENST00000319420 DDX54Q8TDD1 881 aaKnown RBP19.79■□□□□ 0.76
SHISA2-201ENST00000319420 TNS3Q68CZ2 1445 aa19.78■□□□□ 0.76
SHISA2-201ENST00000319420 HMMRO75330 724 aa19.78■□□□□ 0.76
SHISA2-201ENST00000319420 GIGYF1O75420 1035 aaPredicted RBP19.78■□□□□ 0.76
SHISA2-201ENST00000319420 SRCIN1Q9C0H9 1055 aa19.78■□□□□ 0.76
SHISA2-201ENST00000319420 TBC1D9Q6ZT07 1266 aa19.78■□□□□ 0.76
SHISA2-201ENST00000319420 IL1RAPL2Q9NP60 686 aa19.78■□□□□ 0.76
SHISA2-201ENST00000319420 CYP27B1O15528 508 aa19.77■□□□□ 0.76
SHISA2-201ENST00000319420 CWF19L2Q2TBE0 894 aaKnown RBP19.77■□□□□ 0.76
SHISA2-201ENST00000319420 BMP2KLQ5H9B9 411 aa19.77■□□□□ 0.76
SHISA2-201ENST00000319420 SPG7Q9UQ90 795 aa19.77■□□□□ 0.76
SHISA2-201ENST00000319420 PHKG2P15735 406 aa19.77■□□□□ 0.76
SHISA2-201ENST00000319420 LMTK3Q96Q04 1460 aa19.77■□□□□ 0.76
SHISA2-201ENST00000319420 GNAI3P08754 354 aa19.77■□□□□ 0.75
SHISA2-201ENST00000319420 MAP3K2Q9Y2U5 619 aa19.77■□□□□ 0.75
SHISA2-201ENST00000319420 TRPM3Q9HCF6 1732 aaPredicted RBP19.77■□□□□ 0.75
SHISA2-201ENST00000319420 DNAAF4Q8WXU2 420 aa19.76■□□□□ 0.75
SHISA2-201ENST00000319420 TBC1D2Q9BYX2 928 aa19.76■□□□□ 0.75
SHISA2-201ENST00000319420 ZNF790Q6PG37 636 aa19.76■□□□□ 0.75
SHISA2-201ENST00000319420 MEGF6O75095 1541 aa19.76■□□□□ 0.75
SHISA2-201ENST00000319420 EVA1CP58658 441 aa19.75■□□□□ 0.75
SHISA2-201ENST00000319420 BABAM1Q9NWV8 329 aa19.75■□□□□ 0.75
SHISA2-201ENST00000319420 DBF4Q9UBU7 674 aaPredicted RBP19.75■□□□□ 0.75
SHISA2-201ENST00000319420 ZNF496Q96IT1 587 aaPredicted RBP19.75■□□□□ 0.75
SHISA2-201ENST00000319420 BECN1Q14457 450 aa19.74■□□□□ 0.75
SHISA2-201ENST00000319420 IFNL2Q8IZJ0 200 aa19.74■□□□□ 0.75
SHISA2-201ENST00000319420 JARID2Q92833 1246 aaPredicted RBP19.74■□□□□ 0.75
SHISA2-201ENST00000319420 USP54Q70EL1 1684 aa19.74■□□□□ 0.75
SHISA2-201ENST00000319420 SLC52A2Q9HAB3 445 aa19.74■□□□□ 0.75
SHISA2-201ENST00000319420 FRAT2O75474 233 aaPredicted RBP19.73■□□□□ 0.75
SHISA2-201ENST00000319420 SRGAP3O43295 1099 aa19.73■□□□□ 0.75
SHISA2-201ENST00000319420 PPP1R42Q7Z4L9 355 aa19.73■□□□□ 0.75
SHISA2-201ENST00000319420 TTC5Q8N0Z6 440 aa19.73■□□□□ 0.75
SHISA2-201ENST00000319420 SURF6O75683 361 aaKnown RBP19.73■□□□□ 0.75
SHISA2-201ENST00000319420 C9orf78Q9NZ63 289 aaPredicted RBP19.73■□□□□ 0.75
SHISA2-201ENST00000319420 CABP4P57796 275 aa19.72■□□□□ 0.75
SHISA2-201ENST00000319420 USP16Q9Y5T5 823 aa19.72■□□□□ 0.75
SHISA2-201ENST00000319420 KIF1AQ12756 1690 aa19.72■□□□□ 0.75
SHISA2-201ENST00000319420 LARP1Q6PKG0 1096 aaKnown RBP19.72■□□□□ 0.75
SHISA2-201ENST00000319420 DCCP43146 1447 aa19.72■□□□□ 0.75
SHISA2-201ENST00000319420 PTCD1O75127 700 aaKnown RBP19.71■□□□□ 0.75
SHISA2-201ENST00000319420 TTC22Q5TAA0 569 aa19.71■□□□□ 0.75
SHISA2-201ENST00000319420 LRRC37A3O60309 1634 aa19.71■□□□□ 0.75
SHISA2-201ENST00000319420 SDSP20132 328 aa19.71■□□□□ 0.75
SHISA2-201ENST00000319420 RBM42Q9BTD8 480 aaKnown RBP19.71■□□□□ 0.75
SHISA2-201ENST00000319420 BEND3Q5T5X7 828 aa19.7■□□□□ 0.74
SHISA2-201ENST00000319420 NUTM1Q86Y26 1132 aa19.7■□□□□ 0.74
SHISA2-201ENST00000319420 FOXD4L1Q9NU39 408 aa19.7■□□□□ 0.74
SHISA2-201ENST00000319420 ATP8B2P98198 1209 aa19.7■□□□□ 0.74
SHISA2-201ENST00000319420 LRRCC1Q9C099 1032 aa19.7■□□□□ 0.74
SHISA2-201ENST00000319420 ZNF330Q9Y3S2 320 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms