RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 KIDINS220Q9ULH0 1771 aa11.68□□□□□ -0.54
RPGR-201ENST00000318842 POGZQ7Z3K3 1410 aa11.68□□□□□ -0.54
RPGR-201ENST00000318842 BRD1O95696 1058 aa11.68□□□□□ -0.54
RPGR-201ENST00000318842 FKBP5Q13451 457 aaPredicted RBP11.68□□□□□ -0.54
RPGR-201ENST00000318842 PPLO60437 1756 aa11.68□□□□□ -0.54
RPGR-201ENST00000318842 REC8O95072 547 aa11.67□□□□□ -0.54
RPGR-201ENST00000318842 FBXW7Q969H0 707 aa11.67□□□□□ -0.54
RPGR-201ENST00000318842 NSD2O96028 1365 aa11.67□□□□□ -0.54
RPGR-201ENST00000318842 PPP4R3BQ5MIZ7 849 aa11.67□□□□□ -0.54
RPGR-201ENST00000318842 CWC27Q6UX04 472 aaKnown RBP11.67□□□□□ -0.54
RPGR-201ENST00000318842 CCDC39Q9UFE4 941 aa11.67□□□□□ -0.54
RPGR-201ENST00000318842 PNPLA6Q8IY17 1366 aa11.67□□□□□ -0.54
RPGR-201ENST00000318842 KIAA2012Q0VF49 1180 aa11.66□□□□□ -0.54
RPGR-201ENST00000318842 USHBP1Q8N6Y0 703 aa11.66□□□□□ -0.54
RPGR-201ENST00000318842 ARHGAP45Q92619 1136 aa11.66□□□□□ -0.54
RPGR-201ENST00000318842 COG3Q96JB2 828 aa11.66□□□□□ -0.54
RPGR-201ENST00000318842 MX1P20591 662 aa11.66□□□□□ -0.54
RPGR-201ENST00000318842 U2AF2P26368 475 aaKnown RBP eCLIP11.66□□□□□ -0.543e-6■■□□□ 13.6
RPGR-201ENST00000318842 CHMLP26374 656 aa11.66□□□□□ -0.54
RPGR-201ENST00000318842 DNM1Q05193 864 aaKnown RBP11.66□□□□□ -0.54
RPGR-201ENST00000318842 SASS6Q6UVJ0 657 aa11.66□□□□□ -0.54
RPGR-201ENST00000318842 TSPYL4Q9UJ04 414 aa11.66□□□□□ -0.54
RPGR-201ENST00000318842 LRMPQ12912 555 aa11.66□□□□□ -0.54
RPGR-201ENST00000318842 CCDC83Q8IWF9 413 aa11.66□□□□□ -0.54
RPGR-201ENST00000318842 CKAP2LQ8IYA6 745 aa11.66□□□□□ -0.54
RPGR-201ENST00000318842 PTPRMP28827 1452 aa11.66□□□□□ -0.54
RPGR-201ENST00000318842 VPS37CA5D8V6 355 aaPredicted RBP11.65□□□□□ -0.54
RPGR-201ENST00000318842 NOLC1Q14978 699 aaKnown RBP eCLIP11.65□□□□□ -0.54
RPGR-201ENST00000318842 SYTL4Q96C24 671 aaPredicted RBP11.65□□□□□ -0.54
RPGR-201ENST00000318842 PHAXQ9H814 394 aaKnown RBP11.65□□□□□ -0.54
RPGR-201ENST00000318842 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.65□□□□□ -0.54
RPGR-201ENST00000318842 V9GYY5 206 aaPredicted RBP11.65□□□□□ -0.54
RPGR-201ENST00000318842 PIK3R4Q99570 1358 aa11.65□□□□□ -0.54
RPGR-201ENST00000318842 EIF2S2P20042 333 aaKnown RBP11.65□□□□□ -0.54
RPGR-201ENST00000318842 NRBP1Q9UHY1 535 aa11.65□□□□□ -0.54
RPGR-201ENST00000318842 MAP2P11137 1827 aaKnown RBP11.65□□□□□ -0.54
RPGR-201ENST00000318842 CHGBP05060 677 aa11.64□□□□□ -0.55
RPGR-201ENST00000318842 KCNF1Q9H3M0 494 aa11.64□□□□□ -0.55
RPGR-201ENST00000318842 CCDC9Q9Y3X0 531 aaKnown RBP11.64□□□□□ -0.55
RPGR-201ENST00000318842 ZBTB22O15209 634 aa11.64□□□□□ -0.55
RPGR-201ENST00000318842 MTHFSDQ2M296 383 aaKnown RBP11.64□□□□□ -0.55
RPGR-201ENST00000318842 ADCK5Q3MIX3 580 aa11.64□□□□□ -0.55
RPGR-201ENST00000318842 NUDT16Q96DE0 195 aaKnown RBP11.64□□□□□ -0.55
RPGR-201ENST00000318842 CWC22Q9HCG8 908 aaKnown RBP11.64□□□□□ -0.55
RPGR-201ENST00000318842 TAF6LQ9Y6J9 622 aa11.64□□□□□ -0.55
RPGR-201ENST00000318842 MYO5BQ9ULV0 1848 aa11.64□□□□□ -0.55
RPGR-201ENST00000318842 AK2P54819 239 aa11.64□□□□□ -0.55
RPGR-201ENST00000318842 FRMPD1Q5SYB0 1578 aa11.63□□□□□ -0.55
RPGR-201ENST00000318842 SETBP1Q9Y6X0 1596 aa11.63□□□□□ -0.55
RPGR-201ENST00000318842 PDIA4P13667 645 aaKnown RBP11.63□□□□□ -0.55
RPGR-201ENST00000318842 ERCC4Q92889 916 aaPredicted RBP11.63□□□□□ -0.55
RPGR-201ENST00000318842 NEXMIFQ5QGS0 1516 aa11.63□□□□□ -0.55
RPGR-201ENST00000318842 IBTKQ9P2D0 1353 aaPredicted RBP11.63□□□□□ -0.55
RPGR-201ENST00000318842 CPS1P31327 1500 aa11.63□□□□□ -0.55
RPGR-201ENST00000318842 NPHP1O15259 732 aa11.63□□□□□ -0.55
RPGR-201ENST00000318842 STK3Q13188 491 aa11.63□□□□□ -0.55
RPGR-201ENST00000318842 TFIP11Q9UBB9 837 aaKnown RBP11.63□□□□□ -0.55
RPGR-201ENST00000318842 NDUFB9Q9Y6M9 179 aa11.63□□□□□ -0.55
RPGR-201ENST00000318842 RPAP1Q9BWH6 1393 aaPredicted RBP11.63□□□□□ -0.55
RPGR-201ENST00000318842 PTMSP20962 102 aa11.62□□□□□ -0.55
RPGR-201ENST00000318842 RUFY3Q7L099 469 aa11.62□□□□□ -0.55
RPGR-201ENST00000318842 LUZP1Q86V48 1076 aa11.62□□□□□ -0.55
RPGR-201ENST00000318842 RPAP2Q8IXW5 612 aaPredicted RBP11.62□□□□□ -0.55
RPGR-201ENST00000318842 LRRCC1Q9C099 1032 aa11.62□□□□□ -0.55
RPGR-201ENST00000318842 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
RPGR-201ENST00000318842 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.62□□□□□ -0.55
RPGR-201ENST00000318842 YEATS2Q9ULM3 1422 aa11.62□□□□□ -0.55
RPGR-201ENST00000318842 SYT1P21579 422 aa11.62□□□□□ -0.55
RPGR-201ENST00000318842 PTGS1P23219 599 aa11.62□□□□□ -0.55
RPGR-201ENST00000318842 RBM33Q96EV2 1170 aaKnown RBP11.62□□□□□ -0.55
RPGR-201ENST00000318842 RIOK3O14730 519 aaKnown RBP11.62□□□□□ -0.55
RPGR-201ENST00000318842 SURF6O75683 361 aaKnown RBP11.62□□□□□ -0.55
RPGR-201ENST00000318842 CEBPZQ03701 1054 aaKnown RBP11.62□□□□□ -0.55
RPGR-201ENST00000318842 C16orf45Q96MC5 204 aaPredicted RBP11.62□□□□□ -0.55
RPGR-201ENST00000318842 CHL1O00533 1208 aa11.61□□□□□ -0.55
RPGR-201ENST00000318842 CASTP20810 708 aaKnown RBP11.61□□□□□ -0.55
RPGR-201ENST00000318842 BRPF1P55201 1214 aaPredicted RBP11.61□□□□□ -0.55
RPGR-201ENST00000318842 ARID5BQ14865 1188 aa11.61□□□□□ -0.55
RPGR-201ENST00000318842 MAP3K19Q56UN5 1328 aa11.61□□□□□ -0.55
RPGR-201ENST00000318842 PRR36Q9H6K5 1346 aa11.61□□□□□ -0.55
RPGR-201ENST00000318842 DYNC1I1O14576 645 aa11.61□□□□□ -0.55
RPGR-201ENST00000318842 ZSCAN20P17040 1043 aaPredicted RBP11.61□□□□□ -0.55
RPGR-201ENST00000318842 PTH1RQ03431 593 aa11.61□□□□□ -0.55
RPGR-201ENST00000318842 ZNF592Q92610 1267 aa11.61□□□□□ -0.55
RPGR-201ENST00000318842 DLG5Q8TDM6 1919 aa11.61□□□□□ -0.55
RPGR-201ENST00000318842 DDX11Q96FC9 970 aa11.6□□□□□ -0.55
RPGR-201ENST00000318842 PA2G4Q9UQ80 394 aaKnown RBP11.6□□□□□ -0.55
RPGR-201ENST00000318842 RIMS1Q86UR5 1692 aaKnown RBP11.6□□□□□ -0.55
RPGR-201ENST00000318842 RPGRIP1LQ68CZ1 1315 aa11.6□□□□□ -0.55
RPGR-201ENST00000318842 GNAI2P04899 355 aa11.6□□□□□ -0.55
RPGR-201ENST00000318842 NBPF7P0C2Y1 421 aaPredicted RBP11.6□□□□□ -0.55
RPGR-201ENST00000318842 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
RPGR-201ENST00000318842 FLIIQ13045 1269 aa11.6□□□□□ -0.55
RPGR-201ENST00000318842 PRPF40BQ6NWY9 871 aaKnown RBP11.6□□□□□ -0.55
RPGR-201ENST00000318842 SNX14Q9Y5W7 946 aa11.6□□□□□ -0.55
RPGR-201ENST00000318842 USP32Q8NFA0 1604 aa11.59□□□□□ -0.55
RPGR-201ENST00000318842 MBD3O95983 291 aa11.59□□□□□ -0.55
RPGR-201ENST00000318842 LIG1P18858 919 aa11.59□□□□□ -0.55
RPGR-201ENST00000318842 MYRIPQ8NFW9 859 aa11.59□□□□□ -0.55
RPGR-201ENST00000318842 METP08581 1390 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms