RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 CHMP4BQ9H444 224 aaKnown RBP9.17□□□□□ -0.94
NPHP1-201ENST00000316534 NKX1-1Q15270 411 aaPredicted RBP9.16□□□□□ -0.94
NPHP1-201ENST00000316534 NUTM2GQ5VZR2 741 aa9.16□□□□□ -0.94
NPHP1-201ENST00000316534 C8orf34Q49A92 452 aa9.16□□□□□ -0.94
NPHP1-201ENST00000316534 ANKRD36CQ5JPF3 1778 aa9.16□□□□□ -0.94
NPHP1-201ENST00000316534 RNMTO43148 476 aaKnown RBP9.16□□□□□ -0.94
NPHP1-201ENST00000316534 EIF4A1P60842 406 aaKnown RBP9.15□□□□□ -0.94
NPHP1-201ENST00000316534 PLEKHO1Q53GL0 409 aaPredicted RBP9.15□□□□□ -0.94
NPHP1-201ENST00000316534 WDR17Q8IZU2 1322 aa9.15□□□□□ -0.94
NPHP1-201ENST00000316534 AFDNP55196 1824 aaKnown RBP9.15□□□□□ -0.94
NPHP1-201ENST00000316534 COL5A3P25940 1745 aaPredicted RBP9.14□□□□□ -0.95
NPHP1-201ENST00000316534 SIRT2Q8IXJ6 389 aa9.14□□□□□ -0.95
NPHP1-201ENST00000316534 LRRC59Q96AG4 307 aaKnown RBP9.14□□□□□ -0.95
NPHP1-201ENST00000316534 BCL2L13Q9BXK5 485 aa9.14□□□□□ -0.95
NPHP1-201ENST00000316534 RWDD1Q9H446 243 aaPredicted RBP9.14□□□□□ -0.95
NPHP1-201ENST00000316534 COL15A1P39059 1388 aa9.14□□□□□ -0.95
NPHP1-201ENST00000316534 THSD7AQ9UPZ6 1657 aa9.14□□□□□ -0.95
NPHP1-201ENST00000316534 C14orf37Q86TY3 774 aa9.14□□□□□ -0.95
NPHP1-201ENST00000316534 DOT1LQ8TEK3 1739 aa9.13□□□□□ -0.95
NPHP1-201ENST00000316534 RTF1Q92541 710 aaKnown RBP9.13□□□□□ -0.95
NPHP1-201ENST00000316534 FRAT1Q92837 279 aaPredicted RBP9.13□□□□□ -0.95
NPHP1-201ENST00000316534 PDE4AP27815 886 aa9.13□□□□□ -0.95
NPHP1-201ENST00000316534 NUCB1Q02818 461 aa9.13□□□□□ -0.95
NPHP1-201ENST00000316534 PHKG2P15735 406 aa9.13□□□□□ -0.95
NPHP1-201ENST00000316534 TSPYL4Q9UJ04 414 aa9.13□□□□□ -0.95
NPHP1-201ENST00000316534 KRT24Q2M2I5 525 aa9.12□□□□□ -0.95
NPHP1-201ENST00000316534 LRP10Q7Z4F1 713 aa9.12□□□□□ -0.95
NPHP1-201ENST00000316534 XPCQ01831 940 aaPredicted RBP9.12□□□□□ -0.95
NPHP1-201ENST00000316534 DDX17Q92841 729 aaKnown RBP9.12□□□□□ -0.95
NPHP1-201ENST00000316534 LGR6Q9HBX8 967 aa9.12□□□□□ -0.95
NPHP1-201ENST00000316534 SLIT2O94813 1529 aa9.12□□□□□ -0.95
NPHP1-201ENST00000316534 LAMB2P55268 1798 aa9.12□□□□□ -0.95
NPHP1-201ENST00000316534 FTSJ3Q8IY81 847 aaKnown RBP9.12□□□□□ -0.95
NPHP1-201ENST00000316534 USHBP1Q8N6Y0 703 aa9.12□□□□□ -0.95
NPHP1-201ENST00000316534 CARD10Q9BWT7 1032 aa9.12□□□□□ -0.95
NPHP1-201ENST00000316534 CHMP4AQ9BY43 222 aa9.12□□□□□ -0.95
NPHP1-201ENST00000316534 UTYO14607 1347 aa9.11□□□□□ -0.95
NPHP1-201ENST00000316534 GCC1Q96CN9 775 aa9.11□□□□□ -0.95
NPHP1-201ENST00000316534 BCORQ6W2J9 1755 aa9.11□□□□□ -0.95
NPHP1-201ENST00000316534 CCDC30Q5VVM6 783 aa9.11□□□□□ -0.95
NPHP1-201ENST00000316534 CANXP27824 592 aaKnown RBP9.1□□□□□ -0.95
NPHP1-201ENST00000316534 FAM161AQ3B820 660 aa9.1□□□□□ -0.95
NPHP1-201ENST00000316534 ANKRD44Q8N8A2 993 aa9.1□□□□□ -0.95
NPHP1-201ENST00000316534 ADCY9O60503 1353 aa9.1□□□□□ -0.95
NPHP1-201ENST00000316534 CCT4P50991 539 aaKnown RBP9.1□□□□□ -0.95
NPHP1-201ENST00000316534 SOX12O15370 315 aa9.1□□□□□ -0.95
NPHP1-201ENST00000316534 SLC52A2Q9HAB3 445 aa9.1□□□□□ -0.95
NPHP1-201ENST00000316534 PDZRN3Q9UPQ7 1066 aa9.1□□□□□ -0.95
NPHP1-201ENST00000316534 DCTPP1Q9H773 170 aa9.09□□□□□ -0.95
NPHP1-201ENST00000316534 CASZ1Q86V15 1759 aa9.09□□□□□ -0.95
NPHP1-201ENST00000316534 SALL3Q9BXA9 1300 aa9.09□□□□□ -0.95
NPHP1-201ENST00000316534 PDIA6Q15084 440 aa9.09□□□□□ -0.95
NPHP1-201ENST00000316534 ZNF530Q6P9A1 599 aaPredicted RBP9.09□□□□□ -0.95
NPHP1-201ENST00000316534 RPAP2Q8IXW5 612 aaPredicted RBP9.09□□□□□ -0.95
NPHP1-201ENST00000316534 CYP27B1O15528 508 aa9.09□□□□□ -0.96
NPHP1-201ENST00000316534 GIGYF1O75420 1035 aaPredicted RBP9.09□□□□□ -0.96
NPHP1-201ENST00000316534 G2E3Q7L622 706 aa9.09□□□□□ -0.96
NPHP1-201ENST00000316534 ITPRIPQ8IWB1 547 aa9.09□□□□□ -0.96
NPHP1-201ENST00000316534 DCAF5Q96JK2 942 aa9.09□□□□□ -0.96
NPHP1-201ENST00000316534 LAS1LQ9Y4W2 734 aaKnown RBP9.09□□□□□ -0.96
NPHP1-201ENST00000316534 SPG7Q9UQ90 795 aa9.08□□□□□ -0.96
NPHP1-201ENST00000316534 NHSQ6T4R5 1651 aa9.08□□□□□ -0.96
NPHP1-201ENST00000316534 CEP85Q6P2H3 762 aa9.08□□□□□ -0.96
NPHP1-201ENST00000316534 HSP90AB1P08238 724 aaKnown RBP9.07□□□□□ -0.96
NPHP1-201ENST00000316534 FLIIQ13045 1269 aa9.07□□□□□ -0.96
NPHP1-201ENST00000316534 IFNL2Q8IZJ0 200 aa9.07□□□□□ -0.96
NPHP1-201ENST00000316534 ERBB4Q15303 1308 aa9.07□□□□□ -0.96
NPHP1-201ENST00000316534 PCDH11XQ9BZA7 1347 aa9.07□□□□□ -0.96
NPHP1-201ENST00000316534 PCDH11YQ9BZA8 1340 aa9.07□□□□□ -0.96
NPHP1-201ENST00000316534 SLC4A2P04920 1241 aa9.07□□□□□ -0.96
NPHP1-201ENST00000316534 MIS18AQ9NYP9 233 aa9.07□□□□□ -0.96
NPHP1-201ENST00000316534 ERVV-2B6SEH9 535 aa9.07□□□□□ -0.96
NPHP1-201ENST00000316534 TATP17735 454 aaPredicted RBP9.07□□□□□ -0.96
NPHP1-201ENST00000316534 LY75O60449 1722 aa9.06□□□□□ -0.96
NPHP1-201ENST00000316534 MTX1Q13505 466 aa9.06□□□□□ -0.96
NPHP1-201ENST00000316534 LTV1Q96GA3 475 aaPredicted RBP9.06□□□□□ -0.96
NPHP1-201ENST00000316534 ZC3H6P61129 1189 aaKnown RBP9.06□□□□□ -0.96
NPHP1-201ENST00000316534 SKAP1Q86WV1 359 aa9.06□□□□□ -0.96
NPHP1-201ENST00000316534 AK9Q5TCS8 1911 aa9.06□□□□□ -0.96
NPHP1-201ENST00000316534 SBF2Q86WG5 1849 aa9.06□□□□□ -0.96
NPHP1-201ENST00000316534 LRP5O75197 1615 aa9.06□□□□□ -0.96
NPHP1-201ENST00000316534 BTBD11A6QL63 1104 aa9.06□□□□□ -0.96
NPHP1-201ENST00000316534 KCNQ3O43525 872 aa9.06□□□□□ -0.96
NPHP1-201ENST00000316534 POLA2Q14181 598 aa9.06□□□□□ -0.96
NPHP1-201ENST00000316534 OSBPL3Q9H4L5 887 aa9.06□□□□□ -0.96
NPHP1-201ENST00000316534 ARAP2Q8WZ64 1704 aa9.05□□□□□ -0.96
NPHP1-201ENST00000316534 C1orf141Q5JVX7 400 aa9.05□□□□□ -0.96
NPHP1-201ENST00000316534 BEND3Q5T5X7 828 aa9.05□□□□□ -0.96
NPHP1-201ENST00000316534 CABLES1Q8TDN4 633 aa9.05□□□□□ -0.96
NPHP1-201ENST00000316534 BCL9O00512 1426 aa9.05□□□□□ -0.96
NPHP1-201ENST00000316534 ZNF790Q6PG37 636 aa9.04□□□□□ -0.96
NPHP1-201ENST00000316534 CHD1LQ86WJ1 897 aa9.04□□□□□ -0.96
NPHP1-201ENST00000316534 A0A1B0GUL6 1792 aa9.04□□□□□ -0.96
NPHP1-201ENST00000316534 MPRIPQ6WCQ1 1025 aa9.04□□□□□ -0.96
NPHP1-201ENST00000316534 ELL2O00472 640 aaPredicted RBP9.04□□□□□ -0.96
NPHP1-201ENST00000316534 BMP2KLQ5H9B9 411 aa9.03□□□□□ -0.96
NPHP1-201ENST00000316534 RAPGEF4Q8WZA2 1011 aa9.03□□□□□ -0.96
NPHP1-201ENST00000316534 DBF4Q9UBU7 674 aaPredicted RBP9.03□□□□□ -0.96
NPHP1-201ENST00000316534 SCN7AQ01118 1682 aa9.03□□□□□ -0.96
NPHP1-201ENST00000316534 USP44Q9H0E7 712 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms