RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 TXNDC2Q86VQ3 553 aa8.49□□□□□ -1.05
SOX6-201ENST00000316399 HYPKQ9NX55 129 aa8.49□□□□□ -1.05
SOX6-201ENST00000316399 PRKCSHP14314 528 aaPredicted RBP8.49□□□□□ -1.05
SOX6-201ENST00000316399 CAGE1Q8TC20 777 aa8.49□□□□□ -1.05
SOX6-201ENST00000316399 LIMCH1Q9UPQ0 1083 aa8.49□□□□□ -1.05
SOX6-201ENST00000316399 UPF3BQ9BZI7 483 aaKnown RBP8.49□□□□□ -1.05
SOX6-201ENST00000316399 BCL11BQ9C0K0 894 aaPredicted RBP8.49□□□□□ -1.05
SOX6-201ENST00000316399 PTPRKQ15262 1439 aa8.49□□□□□ -1.05
SOX6-201ENST00000316399 ANO10Q9NW15 660 aa8.49□□□□□ -1.05
SOX6-201ENST00000316399 BRPF3Q9ULD4 1205 aa8.49□□□□□ -1.05
SOX6-201ENST00000316399 AOX1Q06278 1338 aa8.49□□□□□ -1.05
SOX6-201ENST00000316399 KIF24Q5T7B8 1368 aa8.49□□□□□ -1.05
SOX6-201ENST00000316399 GOLGA6L10A6NI86 522 aa8.49□□□□□ -1.05
SOX6-201ENST00000316399 BMP15O95972 392 aa8.49□□□□□ -1.05
SOX6-201ENST00000316399 ME1P48163 572 aa8.49□□□□□ -1.05
SOX6-201ENST00000316399 OFD1O75665 1012 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 EPS15P42566 896 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 IMMTQ16891 758 aaKnown RBP8.48□□□□□ -1.05
SOX6-201ENST00000316399 CCDC83Q8IWF9 413 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 RBM33Q96EV2 1170 aaKnown RBP8.48□□□□□ -1.05
SOX6-201ENST00000316399 KIF20AO95235 890 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 TRIM27P14373 513 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 AACSQ86V21 672 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 EHBP1Q8NDI1 1231 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 FILIP1Q7Z7B0 1213 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 HSP90AB3PQ58FF7 597 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 VPS53Q5VIR6 699 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 CCDC191Q8NCU4 936 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 FMNL2Q96PY5 1086 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 TTC39AQ5SRH9 613 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 CGNQ9P2M7 1197 aaKnown RBP8.48□□□□□ -1.05
SOX6-201ENST00000316399 DYNC1I1O14576 645 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 TRAPPC8Q9Y2L5 1435 aa8.48□□□□□ -1.05
SOX6-201ENST00000316399 CREBRFQ8IUR6 639 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 A2MP01023 1474 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 TRPM2O94759 1503 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 TTC22Q5TAA0 569 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 CCAR1Q8IX12 1150 aaKnown RBP8.47□□□□□ -1.05
SOX6-201ENST00000316399 CLASP1Q7Z460 1538 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 WASLO00401 505 aaPredicted RBP8.47□□□□□ -1.05
SOX6-201ENST00000316399 MAP9Q49MG5 647 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 NUDT16Q96DE0 195 aaKnown RBP8.47□□□□□ -1.05
SOX6-201ENST00000316399 ATP10BO94823 1461 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 TTC41PQ6P2S7 1318 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 NUCB1Q02818 461 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 AMER1Q5JTC6 1135 aaPredicted RBP8.47□□□□□ -1.05
SOX6-201ENST00000316399 EVI5LQ96CN4 794 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 DBF4Q9UBU7 674 aaPredicted RBP8.47□□□□□ -1.05
SOX6-201ENST00000316399 PZPP20742 1482 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 CDK5RAP3Q96JB5 506 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 RNF41Q9H4P4 317 aaPredicted RBP8.47□□□□□ -1.05
SOX6-201ENST00000316399 TAF7Q15545 349 aaPredicted RBP8.47□□□□□ -1.05
SOX6-201ENST00000316399 ANKLE2Q86XL3 938 aa8.47□□□□□ -1.05
SOX6-201ENST00000316399 RNF214Q8ND24 703 aa8.46□□□□□ -1.05
SOX6-201ENST00000316399 TBC1D2Q9BYX2 928 aa8.46□□□□□ -1.05
SOX6-201ENST00000316399 SERPINC1P01008 464 aa8.46□□□□□ -1.05
SOX6-201ENST00000316399 CCDC150Q8NCX0 1101 aa8.46□□□□□ -1.05
SOX6-201ENST00000316399 INTS4Q96HW7 963 aaKnown RBP8.46□□□□□ -1.05
SOX6-201ENST00000316399 ZSCAN16Q9H4T2 348 aaPredicted RBP8.46□□□□□ -1.05
SOX6-201ENST00000316399 RNF123Q5XPI4 1314 aa8.46□□□□□ -1.05
SOX6-201ENST00000316399 ALDH1L1O75891 902 aa8.46□□□□□ -1.05
SOX6-201ENST00000316399 CEP126Q9P2H0 1117 aa8.46□□□□□ -1.05
SOX6-201ENST00000316399 CLCN1P35523 988 aa8.46□□□□□ -1.06
SOX6-201ENST00000316399 ATL3Q6DD88 541 aa8.46□□□□□ -1.06
SOX6-201ENST00000316399 SMC5Q8IY18 1101 aa8.46□□□□□ -1.06
SOX6-201ENST00000316399 TEX13AQ9BXU3 409 aaPredicted RBP8.46□□□□□ -1.06
SOX6-201ENST00000316399 STX1AQ16623 288 aa8.46□□□□□ -1.06
SOX6-201ENST00000316399 CTDP1Q9Y5B0 961 aaPredicted RBP8.46□□□□□ -1.06
SOX6-201ENST00000316399 PAXBP1Q9Y5B6 917 aa8.46□□□□□ -1.06
SOX6-201ENST00000316399 CCDC69A6NI79 296 aa8.46□□□□□ -1.06
SOX6-201ENST00000316399 TTF1Q15361 905 aaPredicted RBP8.46□□□□□ -1.06
SOX6-201ENST00000316399 KIF18AQ8NI77 898 aa8.46□□□□□ -1.06
SOX6-201ENST00000316399 DNAJC2Q99543 621 aaKnown RBP8.46□□□□□ -1.06
SOX6-201ENST00000316399 PDCL3Q9H2J4 239 aa8.46□□□□□ -1.06
SOX6-201ENST00000316399 CFAP74Q9C0B2 1584 aa8.46□□□□□ -1.06
SOX6-201ENST00000316399 TUBBP07437 444 aa8.45□□□□□ -1.06
SOX6-201ENST00000316399 KANK3Q6NY19 840 aa8.45□□□□□ -1.06
SOX6-201ENST00000316399 TNPO1Q92973 898 aaKnown RBP8.45□□□□□ -1.06
SOX6-201ENST00000316399 JAKMIP1Q96N16 626 aaKnown RBP8.45□□□□□ -1.06
SOX6-201ENST00000316399 SRRTQ9BXP5 876 aaKnown RBP8.45□□□□□ -1.06
SOX6-201ENST00000316399 ECHDC1Q9NTX5 307 aa8.45□□□□□ -1.06
SOX6-201ENST00000316399 CASTP20810 708 aaKnown RBP8.45□□□□□ -1.06
SOX6-201ENST00000316399 UBE2HP62256 183 aa8.45□□□□□ -1.06
SOX6-201ENST00000316399 DNAAF4Q8WXU2 420 aa8.45□□□□□ -1.06
SOX6-201ENST00000316399 BMP2KQ9NSY1 1161 aaPredicted RBP8.45□□□□□ -1.06
SOX6-201ENST00000316399 CCDC171Q6TFL3 1326 aa8.45□□□□□ -1.06
SOX6-201ENST00000316399 UQCRHLA0A096LP55 91 aa8.45□□□□□ -1.06
SOX6-201ENST00000316399 UQCRHP07919 91 aa8.45□□□□□ -1.06
SOX6-201ENST00000316399 CT47A1Q5JQC4 288 aaPredicted RBP8.45□□□□□ -1.06
SOX6-201ENST00000316399 PKNOX2Q96KN3 472 aa8.45□□□□□ -1.06
SOX6-201ENST00000316399 JAKMIP3Q5VZ66 844 aa8.45□□□□□ -1.06
SOX6-201ENST00000316399 NUTM2FA1L443 756 aa8.45□□□□□ -1.06
SOX6-201ENST00000316399 UBAC1Q9BSL1 405 aa8.45□□□□□ -1.06
SOX6-201ENST00000316399 CCDC9Q9Y3X0 531 aaKnown RBP8.44□□□□□ -1.06
SOX6-201ENST00000316399 TERF1P54274 439 aa8.44□□□□□ -1.06
SOX6-201ENST00000316399 PPP4R3BQ5MIZ7 849 aa8.44□□□□□ -1.06
SOX6-201ENST00000316399 HOXB7P09629 217 aa8.44□□□□□ -1.06
SOX6-201ENST00000316399 PDILTQ8N807 584 aa8.44□□□□□ -1.06
SOX6-201ENST00000316399 BTBD11A6QL63 1104 aa8.44□□□□□ -1.06
SOX6-201ENST00000316399 ANKRD18AQ8IVF6 992 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms