RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 FKBP4Q02790 459 aaKnown RBP eCLIP18.01■□□□□ 0.47
KDM3A-201ENST00000312912 ODF2Q5BJF6 829 aa18.01■□□□□ 0.47
KDM3A-201ENST00000312912 LUC7LQ9NQ29 371 aaKnown RBP18.01■□□□□ 0.47
KDM3A-201ENST00000312912 SH2B1Q9NRF2 756 aaPredicted RBP18.01■□□□□ 0.47
KDM3A-201ENST00000312912 TRIM27P14373 513 aa18.01■□□□□ 0.47
KDM3A-201ENST00000312912 FILIP1Q7Z7B0 1213 aa18.01■□□□□ 0.47
KDM3A-201ENST00000312912 SKAP1Q86WV1 359 aa18.01■□□□□ 0.47
KDM3A-201ENST00000312912 DHX29Q7Z478 1369 aaKnown RBP18.01■□□□□ 0.47
KDM3A-201ENST00000312912 NUTM1Q86Y26 1132 aa18.01■□□□□ 0.47
KDM3A-201ENST00000312912 NOL7Q9UMY1 257 aaKnown RBP18.01■□□□□ 0.47
KDM3A-201ENST00000312912 ARHGEF11O15085 1522 aa18.01■□□□□ 0.47
KDM3A-201ENST00000312912 EIF3JO75822 258 aaKnown RBP18.01■□□□□ 0.47
KDM3A-201ENST00000312912 BMP2KLQ5H9B9 411 aa18.01■□□□□ 0.47
KDM3A-201ENST00000312912 SMTNL1A8MU46 457 aa18■□□□□ 0.47
KDM3A-201ENST00000312912 MPHOSPH8Q99549 860 aa18■□□□□ 0.47
KDM3A-201ENST00000312912 PAXIP1Q6ZW49 1069 aaPredicted RBP18■□□□□ 0.47
KDM3A-201ENST00000312912 MCM10Q7L590 875 aa18■□□□□ 0.47
KDM3A-201ENST00000312912 PLEKHH1Q9ULM0 1364 aa17.99■□□□□ 0.47
KDM3A-201ENST00000312912 KCNH5Q8NCM2 988 aa17.99■□□□□ 0.47
KDM3A-201ENST00000312912 TAF7Q15545 349 aaPredicted RBP17.99■□□□□ 0.47
KDM3A-201ENST00000312912 ERLIN1O75477 346 aa17.99■□□□□ 0.47
KDM3A-201ENST00000312912 IKQ13123 557 aaPredicted RBP17.99■□□□□ 0.47
KDM3A-201ENST00000312912 TOM1L2Q6ZVM7 507 aa17.98■□□□□ 0.47
KDM3A-201ENST00000312912 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
KDM3A-201ENST00000312912 KIF2AO00139 706 aaPredicted RBP17.98■□□□□ 0.47
KDM3A-201ENST00000312912 LARP1Q6PKG0 1096 aaKnown RBP17.98■□□□□ 0.47
KDM3A-201ENST00000312912 KLHL34Q8N239 644 aa17.98■□□□□ 0.47
KDM3A-201ENST00000312912 TXLNBQ8N3L3 684 aa17.98■□□□□ 0.47
KDM3A-201ENST00000312912 WASF1Q92558 559 aa17.98■□□□□ 0.47
KDM3A-201ENST00000312912 NSD2O96028 1365 aa17.98■□□□□ 0.47
KDM3A-201ENST00000312912 CCDC183Q5T5S1 534 aa17.98■□□□□ 0.47
KDM3A-201ENST00000312912 SMARCA5O60264 1052 aaPredicted RBP17.97■□□□□ 0.47
KDM3A-201ENST00000312912 KIF20AO95235 890 aa17.97■□□□□ 0.47
KDM3A-201ENST00000312912 FERMT3Q86UX7 667 aa17.97■□□□□ 0.47
KDM3A-201ENST00000312912 TNPO1Q92973 898 aaKnown RBP17.97■□□□□ 0.47
KDM3A-201ENST00000312912 CCDC83Q8IWF9 413 aa17.97■□□□□ 0.47
KDM3A-201ENST00000312912 PRIMPOLQ96LW4 560 aa17.97■□□□□ 0.47
KDM3A-201ENST00000312912 STRN4Q9NRL3 753 aa17.97■□□□□ 0.47
KDM3A-201ENST00000312912 MIS18AQ9NYP9 233 aa17.97■□□□□ 0.47
KDM3A-201ENST00000312912 AXDND1Q5T1B0 1012 aaPredicted RBP17.97■□□□□ 0.47
KDM3A-201ENST00000312912 PLCD4Q9BRC7 762 aa17.97■□□□□ 0.47
KDM3A-201ENST00000312912 IMMTQ16891 758 aaKnown RBP17.97■□□□□ 0.47
KDM3A-201ENST00000312912 IL16Q14005 1332 aa17.96■□□□□ 0.47
KDM3A-201ENST00000312912 SAMD1Q6SPF0 538 aaPredicted RBP17.96■□□□□ 0.47
KDM3A-201ENST00000312912 UBAC1Q9BSL1 405 aa17.96■□□□□ 0.47
KDM3A-201ENST00000312912 CCDC94Q9BW85 323 aaPredicted RBP17.96■□□□□ 0.47
KDM3A-201ENST00000312912 ADGRF5Q8IZF2 1346 aa17.96■□□□□ 0.47
KDM3A-201ENST00000312912 DDX54Q8TDD1 881 aaKnown RBP17.96■□□□□ 0.47
KDM3A-201ENST00000312912 IPO4Q8TEX9 1081 aaKnown RBP17.96■□□□□ 0.47
KDM3A-201ENST00000312912 NUP133Q8WUM0 1156 aa17.96■□□□□ 0.47
KDM3A-201ENST00000312912 TBC1D32Q96NH3 1257 aa17.96■□□□□ 0.47
KDM3A-201ENST00000312912 LIMCH1Q9UPQ0 1083 aa17.96■□□□□ 0.47
KDM3A-201ENST00000312912 PTPRCP08575 1304 aa17.96■□□□□ 0.47
KDM3A-201ENST00000312912 PRPF40BQ6NWY9 871 aaKnown RBP17.96■□□□□ 0.47
KDM3A-201ENST00000312912 SCAF11Q99590 1463 aaKnown RBP17.96■□□□□ 0.47
KDM3A-201ENST00000312912 KRT18P05783 430 aaKnown RBP17.95■□□□□ 0.46
KDM3A-201ENST00000312912 WAPLQ7Z5K2 1190 aa17.95■□□□□ 0.46
KDM3A-201ENST00000312912 SSFA2P28290 1259 aa17.95■□□□□ 0.46
KDM3A-201ENST00000312912 HSP90AB2PQ58FF8 381 aa17.95■□□□□ 0.46
KDM3A-201ENST00000312912 DDX11Q96FC9 970 aa17.95■□□□□ 0.46
KDM3A-201ENST00000312912 PRDM11Q9NQV5 511 aa17.95■□□□□ 0.46
KDM3A-201ENST00000312912 SPDYE4A6NLX3 237 aa17.94■□□□□ 0.46
KDM3A-201ENST00000312912 TDO2P48775 406 aa17.94■□□□□ 0.46
KDM3A-201ENST00000312912 ZFYVE27Q5T4F4 411 aa17.94■□□□□ 0.46
KDM3A-201ENST00000312912 TMCO3Q6UWJ1 677 aa17.94■□□□□ 0.46
KDM3A-201ENST00000312912 ANO10Q9NW15 660 aa17.94■□□□□ 0.46
KDM3A-201ENST00000312912 GTF2F1P35269 517 aaKnown RBP eCLIP17.93■□□□□ 0.466e-9■■■■■ 33
KDM3A-201ENST00000312912 SOGA3Q5TF21 947 aa17.93■□□□□ 0.46
KDM3A-201ENST00000312912 NME9Q86XW9 330 aa17.93■□□□□ 0.46
KDM3A-201ENST00000312912 SKIDA1Q1XH10 827 aa17.93■□□□□ 0.46
KDM3A-201ENST00000312912 EMILIN1Q9Y6C2 1016 aa17.93■□□□□ 0.46
KDM3A-201ENST00000312912 AMOTQ4VCS5 1084 aa17.93■□□□□ 0.46
KDM3A-201ENST00000312912 HMGB1P09429 215 aaKnown RBP17.93■□□□□ 0.46
KDM3A-201ENST00000312912 CTR9Q6PD62 1173 aa17.93■□□□□ 0.46
KDM3A-201ENST00000312912 UBXN4Q92575 508 aa17.93■□□□□ 0.46
KDM3A-201ENST00000312912 AKAP2Q9Y2D5 859 aa17.93■□□□□ 0.46
KDM3A-201ENST00000312912 SFPQP23246 707 aaKnown RBP eCLIP17.92■□□□□ 0.46
KDM3A-201ENST00000312912 TBC1D9Q6ZT07 1266 aa17.92■□□□□ 0.46
KDM3A-201ENST00000312912 FAM177A1Q8N128 213 aaPredicted RBP17.92■□□□□ 0.46
KDM3A-201ENST00000312912 FAM107BQ9H098 131 aa17.92■□□□□ 0.46
KDM3A-201ENST00000312912 DNAAF4Q8WXU2 420 aa17.92■□□□□ 0.46
KDM3A-201ENST00000312912 IGHDP01880 384 aa17.92■□□□□ 0.46
KDM3A-201ENST00000312912 BOLA2Q9H3K6 86 aa17.92■□□□□ 0.46
KDM3A-201ENST00000312912 F6X3S4 739 aa17.91■□□□□ 0.46
KDM3A-201ENST00000312912 HDAC1Q13547 482 aaPredicted RBP17.91■□□□□ 0.46
KDM3A-201ENST00000312912 CFAP100Q494V2 611 aa17.91■□□□□ 0.46
KDM3A-201ENST00000312912 ARHGAP45Q92619 1136 aa17.91■□□□□ 0.46
KDM3A-201ENST00000312912 CEP131Q9UPN4 1083 aa17.91■□□□□ 0.46
KDM3A-201ENST00000312912 CTAGE5O15320 804 aa17.91■□□□□ 0.46
KDM3A-201ENST00000312912 IDH1O75874 414 aaKnown RBP17.91■□□□□ 0.46
KDM3A-201ENST00000312912 ERLIN2O94905 339 aa17.91■□□□□ 0.46
KDM3A-201ENST00000312912 XRCC6P12956 609 aaKnown RBP eCLIP17.91■□□□□ 0.462e-7■■□□□ 13.8
KDM3A-201ENST00000312912 BMP2KQ9NSY1 1161 aaPredicted RBP17.91■□□□□ 0.46
KDM3A-201ENST00000312912 SYCP1Q15431 976 aa17.9■□□□□ 0.46
KDM3A-201ENST00000312912 CCDC181Q5TID7 509 aa17.9■□□□□ 0.46
KDM3A-201ENST00000312912 DYDC1Q8WWB3 177 aa17.9■□□□□ 0.46
KDM3A-201ENST00000312912 C14orf93Q9H972 538 aaKnown RBP17.9■□□□□ 0.46
KDM3A-201ENST00000312912 LRRFIP2Q9Y608 721 aaKnown RBP17.9■□□□□ 0.46
KDM3A-201ENST00000312912 WASLO00401 505 aaPredicted RBP17.9■□□□□ 0.46
KDM3A-201ENST00000312912 PTPN14Q15678 1187 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms