RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 NECTIN2Q92692 538 aa28.6■■■□□ 2.17
CTSF-201ENST00000310325 AXIN2Q9Y2T1 843 aa28.59■■■□□ 2.17
CTSF-201ENST00000310325 PXDNQ92626 1479 aa28.59■■■□□ 2.17
CTSF-201ENST00000310325 C22orf23Q9BZE7 217 aa28.59■■■□□ 2.17
CTSF-201ENST00000310325 OVOS2A0A0G2JMS6 1433 aa28.58■■■□□ 2.17
CTSF-201ENST00000310325 PXDNLA1KZ92 1463 aa28.58■■■□□ 2.17
CTSF-201ENST00000310325 HDGFL1Q5TGJ6 251 aa28.57■■■□□ 2.16
CTSF-201ENST00000310325 EIF4A1P60842 406 aaKnown RBP28.56■■■□□ 2.16
CTSF-201ENST00000310325 TEFQ10587 303 aa28.56■■■□□ 2.16
CTSF-201ENST00000310325 USP35Q9P2H5 1018 aa28.56■■■□□ 2.16
CTSF-201ENST00000310325 HOXB7P09629 217 aa28.55■■■□□ 2.16
CTSF-201ENST00000310325 C1orf141Q5JVX7 400 aa28.55■■■□□ 2.16
CTSF-201ENST00000310325 CADPS2Q86UW7 1296 aa28.55■■■□□ 2.16
CTSF-201ENST00000310325 ERBB3P21860 1342 aa28.54■■■□□ 2.16
CTSF-201ENST00000310325 HMMRO75330 724 aa28.54■■■□□ 2.16
CTSF-201ENST00000310325 LMTK3Q96Q04 1460 aa28.54■■■□□ 2.16
CTSF-201ENST00000310325 MPRIPQ6WCQ1 1025 aa28.53■■■□□ 2.16
CTSF-201ENST00000310325 ZC3H6P61129 1189 aaKnown RBP28.53■■■□□ 2.16
CTSF-201ENST00000310325 RNMTO43148 476 aaKnown RBP28.52■■■□□ 2.16
CTSF-201ENST00000310325 PLEKHM2Q8IWE5 1019 aa28.52■■■□□ 2.16
CTSF-201ENST00000310325 NPHP3Q7Z494 1330 aa28.52■■■□□ 2.16
CTSF-201ENST00000310325 GNAI2P04899 355 aa28.52■■■□□ 2.16
CTSF-201ENST00000310325 CHMP4AQ9BY43 222 aa28.52■■■□□ 2.16
CTSF-201ENST00000310325 SIPA1L3O60292 1781 aaPredicted RBP28.51■■■□□ 2.15
CTSF-201ENST00000310325 BTBD11A6QL63 1104 aa28.51■■■□□ 2.15
CTSF-201ENST00000310325 GNAI3P08754 354 aa28.51■■■□□ 2.15
CTSF-201ENST00000310325 HSPA2P54652 639 aa28.51■■■□□ 2.15
CTSF-201ENST00000310325 DDX17Q92841 729 aaKnown RBP28.51■■■□□ 2.15
CTSF-201ENST00000310325 ADAMTS7Q9UKP4 1686 aa28.51■■■□□ 2.15
CTSF-201ENST00000310325 CRYBG1Q9Y4K1 1723 aa28.5■■■□□ 2.15
CTSF-201ENST00000310325 XIRP1Q702N8 1843 aaKnown RBP28.5■■■□□ 2.15
CTSF-201ENST00000310325 COL18A1P39060 1754 aa28.5■■■□□ 2.15
CTSF-201ENST00000310325 TNS3Q68CZ2 1445 aa28.5■■■□□ 2.15
CTSF-201ENST00000310325 KCNQ3O43525 872 aa28.48■■■□□ 2.15
CTSF-201ENST00000310325 TBC1D2Q9BYX2 928 aa28.47■■■□□ 2.15
CTSF-201ENST00000310325 PHAXQ9H814 394 aaKnown RBP28.47■■■□□ 2.15
CTSF-201ENST00000310325 GSPT1P15170 499 aaKnown RBP28.47■■■□□ 2.15
CTSF-201ENST00000310325 EIF2S2P20042 333 aaKnown RBP28.47■■■□□ 2.15
CTSF-201ENST00000310325 ABCC6O95255 1503 aa28.46■■■□□ 2.15
CTSF-201ENST00000310325 RBM25P49756 843 aaKnown RBP28.46■■■□□ 2.15
CTSF-201ENST00000310325 TTC22Q5TAA0 569 aa28.45■■■□□ 2.15
CTSF-201ENST00000310325 TBC1D9Q6ZT07 1266 aa28.45■■■□□ 2.15
CTSF-201ENST00000310325 C16orf71Q8IYS4 520 aaPredicted RBP28.45■■■□□ 2.14
CTSF-201ENST00000310325 CDC45O75419 566 aa28.44■■■□□ 2.14
CTSF-201ENST00000310325 NFKBIBQ15653 356 aa28.43■■■□□ 2.14
CTSF-201ENST00000310325 CHPF2Q9P2E5 772 aa28.43■■■□□ 2.14
CTSF-201ENST00000310325 SMARCA5O60264 1052 aaPredicted RBP28.43■■■□□ 2.14
CTSF-201ENST00000310325 APBB1O00213 710 aa28.42■■■□□ 2.14
CTSF-201ENST00000310325 RAPGEF4Q8WZA2 1011 aa28.42■■■□□ 2.14
CTSF-201ENST00000310325 NLRP2Q9NX02 1062 aa28.42■■■□□ 2.14
CTSF-201ENST00000310325 SPATA31A3Q5VYP0 1347 aa28.41■■■□□ 2.14
CTSF-201ENST00000310325 OTUD7AQ8TE49 926 aaPredicted RBP28.41■■■□□ 2.14
CTSF-201ENST00000310325 SCN11AQ9UI33 1791 aa28.41■■■□□ 2.14
CTSF-201ENST00000310325 ATP8B2P98198 1209 aa28.4■■■□□ 2.14
CTSF-201ENST00000310325 STRCQ7RTU9 1775 aa28.4■■■□□ 2.14
CTSF-201ENST00000310325 HEG1Q9ULI3 1381 aa28.4■■■□□ 2.14
CTSF-201ENST00000310325 USP44Q9H0E7 712 aa28.4■■■□□ 2.14
CTSF-201ENST00000310325 BCL11AQ9H165 835 aa28.4■■■□□ 2.14
CTSF-201ENST00000310325 CABLES1Q8TDN4 633 aa28.39■■■□□ 2.14
CTSF-201ENST00000310325 SRCIN1Q9C0H9 1055 aa28.38■■■□□ 2.13
CTSF-201ENST00000310325 LRRFIP2Q9Y608 721 aaKnown RBP28.38■■■□□ 2.13
CTSF-201ENST00000310325 EIF5BO60841 1220 aaKnown RBP28.38■■■□□ 2.13
CTSF-201ENST00000310325 UBTFL1P0CB47 393 aaPredicted RBP28.38■■■□□ 2.13
CTSF-201ENST00000310325 TATP17735 454 aaPredicted RBP28.37■■■□□ 2.13
CTSF-201ENST00000310325 DEKP35659 375 aaKnown RBP28.37■■■□□ 2.13
CTSF-201ENST00000310325 PNMA6EA0A0J9YXQ4 647 aa28.36■■■□□ 2.13
CTSF-201ENST00000310325 DBF4Q9UBU7 674 aaPredicted RBP28.36■■■□□ 2.13
CTSF-201ENST00000310325 MEGF6O75095 1541 aa28.36■■■□□ 2.13
CTSF-201ENST00000310325 PLEKHG2Q9H7P9 1386 aa28.36■■■□□ 2.13
CTSF-201ENST00000310325 KDM4FA0A1W2PPD8 638 aa28.36■■■□□ 2.13
CTSF-201ENST00000310325 GIGYF1O75420 1035 aaPredicted RBP28.36■■■□□ 2.13
CTSF-201ENST00000310325 SLKQ9H2G2 1235 aaPredicted RBP28.36■■■□□ 2.13
CTSF-201ENST00000310325 DNAAF4Q8WXU2 420 aa28.35■■■□□ 2.13
CTSF-201ENST00000310325 EXOC6BQ9Y2D4 811 aa28.35■■■□□ 2.13
CTSF-201ENST00000310325 CPDO75976 1380 aa28.35■■■□□ 2.13
CTSF-201ENST00000310325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.35■■■□□ 2.13
CTSF-201ENST00000310325 CSB-PGBD3P0DP91 1061 aa28.34■■■□□ 2.13
CTSF-201ENST00000310325 ANTXR1Q9H6X2 564 aa28.34■■■□□ 2.13
CTSF-201ENST00000310325 SPG7Q9UQ90 795 aa28.34■■■□□ 2.13
CTSF-201ENST00000310325 PI4KAP2A4QPH2 592 aa28.33■■■□□ 2.13
CTSF-201ENST00000310325 PI4KAP1Q8N8J0 262 aa28.33■■■□□ 2.13
CTSF-201ENST00000310325 OSBPL3Q9H4L5 887 aa28.33■■■□□ 2.13
CTSF-201ENST00000310325 KDM6AO15550 1401 aaPredicted RBP28.33■■■□□ 2.13
CTSF-201ENST00000310325 IBTKQ9P2D0 1353 aaPredicted RBP28.33■■■□□ 2.13
CTSF-201ENST00000310325 PKD1L3Q7Z443 1732 aa28.33■■■□□ 2.13
CTSF-201ENST00000310325 CHRNA2Q15822 529 aa28.33■■■□□ 2.13
CTSF-201ENST00000310325 BRINP3Q76B58 766 aa28.33■■■□□ 2.13
CTSF-201ENST00000310325 ADCY9O60503 1353 aa28.32■■■□□ 2.12
CTSF-201ENST00000310325 ANXA1P04083 346 aa28.32■■■□□ 2.12
CTSF-201ENST00000310325 BEND3Q5T5X7 828 aa28.32■■■□□ 2.12
CTSF-201ENST00000310325 LRRCC1Q9C099 1032 aa28.32■■■□□ 2.12
CTSF-201ENST00000310325 PHKG2P15735 406 aa28.31■■■□□ 2.12
CTSF-201ENST00000310325 HSCBQ8IWL3 235 aa28.31■■■□□ 2.12
CTSF-201ENST00000310325 SDSP20132 328 aa28.31■■■□□ 2.12
CTSF-201ENST00000310325 PDE1AP54750 535 aa28.3■■■□□ 2.12
CTSF-201ENST00000310325 SLC52A2Q9HAB3 445 aa28.3■■■□□ 2.12
CTSF-201ENST00000310325 SSH3Q8TE77 659 aa28.29■■■□□ 2.12
CTSF-201ENST00000310325 SNX21Q969T3 373 aa28.29■■■□□ 2.12
CTSF-201ENST00000310325 TUBGCP6Q96RT7 1819 aa28.29■■■□□ 2.12
CTSF-201ENST00000310325 IFNL2Q8IZJ0 200 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms