RNA–Protein interactions for RNA: ENST00000310032.12

TSPAN17-202, Transcript of tetraspanin 17, humanhuman

TSL 5 BASIC

Gene TSPAN17, Length 2,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-202ENST00000310032 GPT2Q8TD30 523 aa24.41■■□□□ 1.5
TSPAN17-202ENST00000310032 DNAJC5Q9H3Z4 198 aa24.41■■□□□ 1.5
TSPAN17-202ENST00000310032 DCTPP1Q9H773 170 aa24.41■■□□□ 1.5
TSPAN17-202ENST00000310032 NALCNQ8IZF0 1738 aa24.39■■□□□ 1.5
TSPAN17-202ENST00000310032 NOL7Q9UMY1 257 aaKnown RBP24.39■■□□□ 1.5
TSPAN17-202ENST00000310032 ZDHHC9Q9Y397 364 aa24.39■■□□□ 1.5
TSPAN17-202ENST00000310032 CEP170BQ9Y4F5 1589 aaPredicted RBP24.39■■□□□ 1.49
TSPAN17-202ENST00000310032 XPCQ01831 940 aaPredicted RBP24.39■■□□□ 1.49
TSPAN17-202ENST00000310032 PDLIM2Q96JY6 352 aa24.39■■□□□ 1.49
TSPAN17-202ENST00000310032 PIK3C2AO00443 1686 aa24.38■■□□□ 1.49
TSPAN17-202ENST00000310032 TTC21AQ8NDW8 1320 aa24.38■■□□□ 1.49
TSPAN17-202ENST00000310032 XRN1Q8IZH2 1706 aaKnown RBP24.38■■□□□ 1.49
TSPAN17-202ENST00000310032 INTS3Q68E01 1043 aaKnown RBP24.38■■□□□ 1.49
TSPAN17-202ENST00000310032 ABTB2Q8N961 1025 aa24.38■■□□□ 1.49
TSPAN17-202ENST00000310032 API5Q9BZZ5 524 aaKnown RBP24.38■■□□□ 1.49
TSPAN17-202ENST00000310032 HS1BP3Q53T59 392 aa24.37■■□□□ 1.49
TSPAN17-202ENST00000310032 USHBP1Q8N6Y0 703 aa24.37■■□□□ 1.49
TSPAN17-202ENST00000310032 SDSP20132 328 aa24.37■■□□□ 1.49
TSPAN17-202ENST00000310032 APBB1O00213 710 aa24.36■■□□□ 1.49
TSPAN17-202ENST00000310032 FLT4P35916 1363 aa24.36■■□□□ 1.49
TSPAN17-202ENST00000310032 CHL1O00533 1208 aa24.36■■□□□ 1.49
TSPAN17-202ENST00000310032 SMARCA5O60264 1052 aaPredicted RBP24.36■■□□□ 1.49
TSPAN17-202ENST00000310032 CWC22Q9HCG8 908 aaKnown RBP24.36■■□□□ 1.49
TSPAN17-202ENST00000310032 NSFL1CQ9UNZ2 370 aaKnown RBP24.35■■□□□ 1.49
TSPAN17-202ENST00000310032 ZNF500O60304 480 aaPredicted RBP24.35■■□□□ 1.49
TSPAN17-202ENST00000310032 SBNO1A3KN83 1393 aa24.34■■□□□ 1.49
TSPAN17-202ENST00000310032 FOXD4L5Q5VV16 416 aaPredicted RBP24.34■■□□□ 1.49
TSPAN17-202ENST00000310032 FOXD4L4Q8WXT5 416 aaPredicted RBP24.34■■□□□ 1.49
TSPAN17-202ENST00000310032 TMEM63CQ9P1W3 806 aa24.34■■□□□ 1.49
TSPAN17-202ENST00000310032 RGPD1P0DJD0 1748 aa24.34■■□□□ 1.49
TSPAN17-202ENST00000310032 ST18O60284 1047 aa24.34■■□□□ 1.49
TSPAN17-202ENST00000310032 TERF1P54274 439 aa24.34■■□□□ 1.49
TSPAN17-202ENST00000310032 FAM13BQ9NYF5 915 aa24.34■■□□□ 1.49
TSPAN17-202ENST00000310032 ZBTB7CA1YPR0 619 aa24.33■■□□□ 1.49
TSPAN17-202ENST00000310032 SYCE3A1L190 88 aa24.32■■□□□ 1.48
TSPAN17-202ENST00000310032 HOXC9P31274 260 aa24.32■■□□□ 1.48
TSPAN17-202ENST00000310032 ANKLE2Q86XL3 938 aa24.32■■□□□ 1.48
TSPAN17-202ENST00000310032 CRB1P82279 1406 aa24.31■■□□□ 1.48
TSPAN17-202ENST00000310032 ANKRD44Q8N8A2 993 aa24.31■■□□□ 1.48
TSPAN17-202ENST00000310032 LRSAM1Q6UWE0 723 aa24.3■■□□□ 1.48
TSPAN17-202ENST00000310032 IGSF1Q8N6C5 1336 aa24.3■■□□□ 1.48
TSPAN17-202ENST00000310032 ZKSCAN5Q9Y2L8 839 aa24.3■■□□□ 1.48
TSPAN17-202ENST00000310032 ARHGEF10O15013 1369 aa24.29■■□□□ 1.48
TSPAN17-202ENST00000310032 NECTIN2Q92692 538 aa24.29■■□□□ 1.48
TSPAN17-202ENST00000310032 G2E3Q7L622 706 aa24.29■■□□□ 1.48
TSPAN17-202ENST00000310032 PHF8Q9UPP1 1060 aa24.29■■□□□ 1.48
TSPAN17-202ENST00000310032 ATP10DQ9P241 1426 aa24.29■■□□□ 1.48
TSPAN17-202ENST00000310032 UQCRHLA0A096LP55 91 aa24.28■■□□□ 1.48
TSPAN17-202ENST00000310032 UQCRHP07919 91 aa24.28■■□□□ 1.48
TSPAN17-202ENST00000310032 ESCO1Q5FWF5 840 aa24.28■■□□□ 1.48
TSPAN17-202ENST00000310032 CEP85Q6P2H3 762 aa24.28■■□□□ 1.48
TSPAN17-202ENST00000310032 CASC1Q6TDU7 716 aa24.28■■□□□ 1.48
TSPAN17-202ENST00000310032 TSPYL4Q9UJ04 414 aa24.28■■□□□ 1.48
TSPAN17-202ENST00000310032 RGS12O14924 1447 aa24.27■■□□□ 1.48
TSPAN17-202ENST00000310032 RNF214Q8ND24 703 aa24.27■■□□□ 1.48
TSPAN17-202ENST00000310032 KDRP35968 1356 aa24.27■■□□□ 1.48
TSPAN17-202ENST00000310032 KIF24Q5T7B8 1368 aa24.27■■□□□ 1.48
TSPAN17-202ENST00000310032 F6X3S4 739 aa24.26■■□□□ 1.47
TSPAN17-202ENST00000310032 RTF1Q92541 710 aaKnown RBP24.26■■□□□ 1.47
TSPAN17-202ENST00000310032 SLC4A2P04920 1241 aa24.26■■□□□ 1.47
TSPAN17-202ENST00000310032 FMN2Q9NZ56 1722 aa24.25■■□□□ 1.47
TSPAN17-202ENST00000310032 ORAI2Q96SN7 254 aa24.25■■□□□ 1.47
TSPAN17-202ENST00000310032 ANKARQ7Z5J8 1434 aa24.24■■□□□ 1.47
TSPAN17-202ENST00000310032 RPAP2Q8IXW5 612 aaPredicted RBP24.24■■□□□ 1.47
TSPAN17-202ENST00000310032 MARF1Q9Y4F3 1742 aaKnown RBP24.24■■□□□ 1.47
TSPAN17-202ENST00000310032 REC8O95072 547 aa24.24■■□□□ 1.47
TSPAN17-202ENST00000310032 ERC2O15083 957 aa24.23■■□□□ 1.47
TSPAN17-202ENST00000310032 MEIS3Q99687 375 aa24.22■■□□□ 1.47
TSPAN17-202ENST00000310032 MSH6P52701 1360 aa24.22■■□□□ 1.47
TSPAN17-202ENST00000310032 NEK4P51957 841 aa24.22■■□□□ 1.47
TSPAN17-202ENST00000310032 CCDC39Q9UFE4 941 aa24.22■■□□□ 1.47
TSPAN17-202ENST00000310032 SETD1BQ9UPS6 1966 aaKnown RBP24.21■■□□□ 1.47
TSPAN17-202ENST00000310032 TMX3Q96JJ7 454 aa24.21■■□□□ 1.47
TSPAN17-202ENST00000310032 RTL1A6NKG5 1358 aa24.21■■□□□ 1.47
TSPAN17-202ENST00000310032 IL17REQ8NFR9 667 aa24.21■■□□□ 1.47
TSPAN17-202ENST00000310032 SLC4A10Q6U841 1118 aa24.2■■□□□ 1.47
TSPAN17-202ENST00000310032 ARID3AQ99856 593 aa24.2■■□□□ 1.47
TSPAN17-202ENST00000310032 NWD1Q149M9 1564 aa24.2■■□□□ 1.46
TSPAN17-202ENST00000310032 CSPP1Q1MSJ5 1256 aa24.2■■□□□ 1.46
TSPAN17-202ENST00000310032 PSME1Q06323 249 aa24.19■■□□□ 1.46
TSPAN17-202ENST00000310032 LRRC59Q96AG4 307 aaKnown RBP24.19■■□□□ 1.46
TSPAN17-202ENST00000310032 MCM5P33992 734 aa24.19■■□□□ 1.46
TSPAN17-202ENST00000310032 LMOD2Q6P5Q4 547 aa24.19■■□□□ 1.46
TSPAN17-202ENST00000310032 NBPF6Q5VWK0 638 aa24.18■■□□□ 1.46
TSPAN17-202ENST00000310032 NBPF4Q96M43 638 aa24.18■■□□□ 1.46
TSPAN17-202ENST00000310032 MAP7D2Q96T17 732 aa24.18■■□□□ 1.46
TSPAN17-202ENST00000310032 KIAA0232Q92628 1395 aa24.17■■□□□ 1.46
TSPAN17-202ENST00000310032 NOL8Q76FK4 1167 aaKnown RBP24.17■■□□□ 1.46
TSPAN17-202ENST00000310032 MBD3O95983 291 aa24.17■■□□□ 1.46
TSPAN17-202ENST00000310032 BRD1O95696 1058 aa24.16■■□□□ 1.46
TSPAN17-202ENST00000310032 TSHZ3Q63HK5 1081 aa24.16■■□□□ 1.46
TSPAN17-202ENST00000310032 CHD2O14647 1828 aaKnown RBP24.16■■□□□ 1.46
TSPAN17-202ENST00000310032 FOXD4L6Q3SYB3 417 aaPredicted RBP24.16■■□□□ 1.46
TSPAN17-202ENST00000310032 FOXD4L3Q6VB84 417 aaPredicted RBP24.16■■□□□ 1.46
TSPAN17-202ENST00000310032 GNAT3A8MTJ3 354 aa24.15■■□□□ 1.46
TSPAN17-202ENST00000310032 PDE1AP54750 535 aa24.15■■□□□ 1.46
TSPAN17-202ENST00000310032 DYNC1I1O14576 645 aa24.14■■□□□ 1.46
TSPAN17-202ENST00000310032 SASS6Q6UVJ0 657 aa24.14■■□□□ 1.46
TSPAN17-202ENST00000310032 TSPY26PQ9H489 355 aa24.14■■□□□ 1.45
TSPAN17-202ENST00000310032 PALD1Q9ULE6 856 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms