RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 SF3B2Q13435 895 aaKnown RBP16.93■□□□□ 0.3
APTX-201ENST00000309615 CCDC125Q86Z20 511 aa16.93■□□□□ 0.3
APTX-201ENST00000309615 BTAF1O14981 1849 aa16.93■□□□□ 0.3
APTX-201ENST00000309615 ASAP1Q9ULH1 1129 aa16.92■□□□□ 0.3
APTX-201ENST00000309615 DEFB132Q7Z7B7 95 aa16.9■□□□□ 0.3
APTX-201ENST00000309615 ATG3Q9NT62 314 aa16.9■□□□□ 0.3
APTX-201ENST00000309615 SLC39A6Q13433 755 aa16.9■□□□□ 0.3
APTX-201ENST00000309615 CCDC27Q2M243 656 aa16.9■□□□□ 0.3
APTX-201ENST00000309615 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
APTX-201ENST00000309615 EN1Q05925 392 aaPredicted RBP16.89■□□□□ 0.29
APTX-201ENST00000309615 TAF7Q15545 349 aaPredicted RBP16.89■□□□□ 0.29
APTX-201ENST00000309615 SIPA1L3O60292 1781 aaPredicted RBP16.89■□□□□ 0.29
APTX-201ENST00000309615 PALLDQ8WX93 1383 aa16.89■□□□□ 0.29
APTX-201ENST00000309615 BTBD11A6QL63 1104 aa16.88■□□□□ 0.29
APTX-201ENST00000309615 PLSCR1O15162 318 aa16.88■□□□□ 0.29
APTX-201ENST00000309615 BAG6P46379 1132 aa16.88■□□□□ 0.29
APTX-201ENST00000309615 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
APTX-201ENST00000309615 MIS18AQ9NYP9 233 aa16.88■□□□□ 0.29
APTX-201ENST00000309615 SOCS7O14512 581 aa16.87■□□□□ 0.29
APTX-201ENST00000309615 SMARCC1Q92922 1105 aaPredicted RBP16.87■□□□□ 0.29
APTX-201ENST00000309615 CAMKK2Q96RR4 588 aa16.87■□□□□ 0.29
APTX-201ENST00000309615 KCNQ3O43525 872 aa16.86■□□□□ 0.29
APTX-201ENST00000309615 EZH2Q15910 746 aaKnown RBP16.86■□□□□ 0.29
APTX-201ENST00000309615 PROM2Q8N271 834 aa16.86■□□□□ 0.29
APTX-201ENST00000309615 NGEFQ8N5V2 710 aa16.86■□□□□ 0.29
APTX-201ENST00000309615 ZNF790Q6PG37 636 aa16.86■□□□□ 0.29
APTX-201ENST00000309615 LAS1LQ9Y4W2 734 aaKnown RBP16.86■□□□□ 0.29
APTX-201ENST00000309615 PTCD1O75127 700 aaKnown RBP16.85■□□□□ 0.29
APTX-201ENST00000309615 KCNQ4P56696 695 aa16.85■□□□□ 0.29
APTX-201ENST00000309615 PAPPAQ13219 1627 aa16.85■□□□□ 0.29
APTX-201ENST00000309615 HNRNPUQ00839 825 aaKnown RBP eCLIP16.84■□□□□ 0.29
APTX-201ENST00000309615 TXNRD1Q16881 649 aa16.84■□□□□ 0.29
APTX-201ENST00000309615 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
APTX-201ENST00000309615 CALD1Q05682 793 aaKnown RBP16.84■□□□□ 0.29
APTX-201ENST00000309615 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
APTX-201ENST00000309615 TSPYL4Q9UJ04 414 aa16.84■□□□□ 0.29
APTX-201ENST00000309615 ZNF521Q96K83 1311 aa16.84■□□□□ 0.29
APTX-201ENST00000309615 LOC102724428A0A0B4J2F2 783 aa16.83■□□□□ 0.28
APTX-201ENST00000309615 CHL1O00533 1208 aa16.83■□□□□ 0.28
APTX-201ENST00000309615 SIK1P57059 783 aa16.83■□□□□ 0.28
APTX-201ENST00000309615 CFAP44Q96MT7 982 aa16.83■□□□□ 0.28
APTX-201ENST00000309615 SLC4A9Q96Q91 983 aa16.83■□□□□ 0.28
APTX-201ENST00000309615 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
APTX-201ENST00000309615 KCPQ6ZWJ8 1503 aa16.83■□□□□ 0.28
APTX-201ENST00000309615 LY75O60449 1722 aa16.83■□□□□ 0.28
APTX-201ENST00000309615 ZNF853P0CG23 659 aa16.82■□□□□ 0.28
APTX-201ENST00000309615 WDR63Q8IWG1 891 aa16.82■□□□□ 0.28
APTX-201ENST00000309615 ZNF496Q96IT1 587 aaPredicted RBP16.82■□□□□ 0.28
APTX-201ENST00000309615 CCNL1Q9UK58 526 aaPredicted RBP16.82■□□□□ 0.28
APTX-201ENST00000309615 RGPD3A6NKT7 1758 aaPredicted RBP16.82■□□□□ 0.28
APTX-201ENST00000309615 RGPD4Q7Z3J3 1758 aa16.82■□□□□ 0.28
APTX-201ENST00000309615 IFT57Q9NWB7 429 aa16.82■□□□□ 0.28
APTX-201ENST00000309615 BABAM1Q9NWV8 329 aa16.82■□□□□ 0.28
APTX-201ENST00000309615 KDM3BQ7LBC6 1761 aa16.81■□□□□ 0.28
APTX-201ENST00000309615 ATP6V1AP38606 617 aa16.8■□□□□ 0.28
APTX-201ENST00000309615 GNAI1P63096 354 aa16.8■□□□□ 0.28
APTX-201ENST00000309615 SLC27A3Q5K4L6 730 aa16.8■□□□□ 0.28
APTX-201ENST00000309615 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
APTX-201ENST00000309615 MBIPQ9NS73 344 aa16.8■□□□□ 0.28
APTX-201ENST00000309615 UBR2Q8IWV8 1755 aa16.8■□□□□ 0.28
APTX-201ENST00000309615 IL16Q14005 1332 aa16.8■□□□□ 0.28
APTX-201ENST00000309615 ITPK1Q13572 414 aa16.8■□□□□ 0.28
APTX-201ENST00000309615 FMNL2Q96PY5 1086 aa16.8■□□□□ 0.28
APTX-201ENST00000309615 EIF4A1P60842 406 aaKnown RBP16.79■□□□□ 0.28
APTX-201ENST00000309615 HEG1Q9ULI3 1381 aa16.79■□□□□ 0.28
APTX-201ENST00000309615 TSR2Q969E8 191 aaKnown RBP16.78■□□□□ 0.28
APTX-201ENST00000309615 RREB1Q92766 1687 aa16.78■□□□□ 0.28
APTX-201ENST00000309615 PRAMEF22A3QJZ6 481 aa16.77■□□□□ 0.27
APTX-201ENST00000309615 GOLGA2Q08379 1002 aa16.77■□□□□ 0.27
APTX-201ENST00000309615 KRT24Q2M2I5 525 aa16.77■□□□□ 0.27
APTX-201ENST00000309615 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.27
APTX-201ENST00000309615 LINC00116Q8NCU8 138 aa16.77■□□□□ 0.27
APTX-201ENST00000309615 DNAJC10Q8IXB1 793 aa16.76■□□□□ 0.27
APTX-201ENST00000309615 CDCA7LQ96GN5 454 aa16.76■□□□□ 0.27
APTX-201ENST00000309615 NUP188Q5SRE5 1749 aa16.75■□□□□ 0.27
APTX-201ENST00000309615 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
APTX-201ENST00000309615 ZNF831Q5JPB2 1677 aa16.75■□□□□ 0.27
APTX-201ENST00000309615 SNRPA1P09661 255 aaKnown RBP16.75■□□□□ 0.27
APTX-201ENST00000309615 TJP1Q07157 1748 aa16.75■□□□□ 0.27
APTX-201ENST00000309615 GIGYF1O75420 1035 aaPredicted RBP16.74■□□□□ 0.27
APTX-201ENST00000309615 C5P01031 1676 aa16.74■□□□□ 0.27
APTX-201ENST00000309615 ZBED9Q6R2W3 1325 aa16.74■□□□□ 0.27
APTX-201ENST00000309615 ANO8Q9HCE9 1232 aaPredicted RBP16.73■□□□□ 0.27
APTX-201ENST00000309615 USP16Q9Y5T5 823 aa16.73■□□□□ 0.27
APTX-201ENST00000309615 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
APTX-201ENST00000309615 YTHDC1Q96MU7 727 aaKnown RBP16.73■□□□□ 0.27
APTX-201ENST00000309615 MYH16Q9H6N6 1097 aa16.73■□□□□ 0.27
APTX-201ENST00000309615 CICQ96RK0 1608 aaPredicted RBP16.73■□□□□ 0.27
APTX-201ENST00000309615 TAF1LQ8IZX4 1826 aa16.72■□□□□ 0.27
APTX-201ENST00000309615 E9PSI1 815 aa16.72■□□□□ 0.27
APTX-201ENST00000309615 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
APTX-201ENST00000309615 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
APTX-201ENST00000309615 C8orf58Q8NAV2 365 aa16.72■□□□□ 0.27
APTX-201ENST00000309615 ELL2O00472 640 aaPredicted RBP16.71■□□□□ 0.27
APTX-201ENST00000309615 TEX13AQ9BXU3 409 aaPredicted RBP16.71■□□□□ 0.27
APTX-201ENST00000309615 C4BP0C0L5 1744 aa16.71■□□□□ 0.27
APTX-201ENST00000309615 COL5A3P25940 1745 aaPredicted RBP16.71■□□□□ 0.27
APTX-201ENST00000309615 STARD3NLO95772 234 aa16.71■□□□□ 0.27
APTX-201ENST00000309615 CRKLP46109 303 aaKnown RBP16.71■□□□□ 0.27
APTX-201ENST00000309615 DUSP27Q5VZP5 1158 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms