RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 SIGLEC1Q9BZZ2 1709 aa7.9□□□□□ -1.14
CKS1B-201ENST00000308987 ARID3CA6NKF2 412 aa7.9□□□□□ -1.14
CKS1B-201ENST00000308987 ZMYND10O75800 440 aa7.9□□□□□ -1.14
CKS1B-201ENST00000308987 RTL5Q5HYW3 569 aaPredicted RBP7.9□□□□□ -1.14
CKS1B-201ENST00000308987 INTS6LQ5JSJ4 861 aaKnown RBP7.9□□□□□ -1.14
CKS1B-201ENST00000308987 GALNT6Q8NCL4 622 aa7.9□□□□□ -1.14
CKS1B-201ENST00000308987 HELBQ8NG08 1087 aaPredicted RBP7.9□□□□□ -1.14
CKS1B-201ENST00000308987 ARHGAP9Q9BRR9 750 aa7.9□□□□□ -1.14
CKS1B-201ENST00000308987 CDV3Q9UKY7 258 aaKnown RBP7.9□□□□□ -1.14
CKS1B-201ENST00000308987 BCORL1Q5H9F3 1711 aa7.89□□□□□ -1.15
CKS1B-201ENST00000308987 TUSC1Q2TAM9 212 aa7.89□□□□□ -1.15
CKS1B-201ENST00000308987 FOXD4L5Q5VV16 416 aaPredicted RBP7.89□□□□□ -1.15
CKS1B-201ENST00000308987 PDXDC2PQ6P474 469 aa7.89□□□□□ -1.15
CKS1B-201ENST00000308987 NEDD1Q8NHV4 660 aa7.89□□□□□ -1.15
CKS1B-201ENST00000308987 SLC10A4Q96EP9 437 aa7.89□□□□□ -1.15
CKS1B-201ENST00000308987 K7ELQ4 463 aaPredicted RBP7.88□□□□□ -1.15
CKS1B-201ENST00000308987 BCRP11274 1271 aa7.88□□□□□ -1.15
CKS1B-201ENST00000308987 MYSM1Q5VVJ2 828 aa7.88□□□□□ -1.15
CKS1B-201ENST00000308987 PODNQ7Z5L7 613 aa7.88□□□□□ -1.15
CKS1B-201ENST00000308987 MBIPQ9NS73 344 aa7.88□□□□□ -1.15
CKS1B-201ENST00000308987 RICTORQ6R327 1708 aa7.88□□□□□ -1.15
CKS1B-201ENST00000308987 RAPGEF6Q8TEU7 1601 aa7.88□□□□□ -1.15
CKS1B-201ENST00000308987 MADDQ8WXG6 1647 aa7.88□□□□□ -1.15
CKS1B-201ENST00000308987 PTPRMP28827 1452 aa7.87□□□□□ -1.15
CKS1B-201ENST00000308987 RAPGEF3O95398 923 aa7.87□□□□□ -1.15
CKS1B-201ENST00000308987 LYSMD3Q7Z3D4 306 aa7.87□□□□□ -1.15
CKS1B-201ENST00000308987 ZBTB33Q86T24 672 aa7.87□□□□□ -1.15
CKS1B-201ENST00000308987 TMPRSS4Q9NRS4 437 aa7.87□□□□□ -1.15
CKS1B-201ENST00000308987 GPR25O00155 361 aa7.86□□□□□ -1.15
CKS1B-201ENST00000308987 ADD1P35611 737 aaKnown RBP7.86□□□□□ -1.15
CKS1B-201ENST00000308987 PTGIRP43119 386 aa7.86□□□□□ -1.15
CKS1B-201ENST00000308987 Q8N3U1 123 aa7.86□□□□□ -1.15
CKS1B-201ENST00000308987 KDF1Q8NAX2 398 aaPredicted RBP7.86□□□□□ -1.15
CKS1B-201ENST00000308987 ACDQ96AP0 544 aa7.86□□□□□ -1.15
CKS1B-201ENST00000308987 ZNF837Q96EG3 531 aaPredicted RBP7.86□□□□□ -1.15
CKS1B-201ENST00000308987 ADH1AP07327 375 aa7.85□□□□□ -1.15
CKS1B-201ENST00000308987 PRICKLE2Q7Z3G6 844 aa7.85□□□□□ -1.15
CKS1B-201ENST00000308987 TRIM22Q8IYM9 498 aa7.85□□□□□ -1.15
CKS1B-201ENST00000308987 NUP153P49790 1475 aaKnown RBP7.85□□□□□ -1.15
CKS1B-201ENST00000308987 RIMS1Q86UR5 1692 aaKnown RBP7.85□□□□□ -1.15
CKS1B-201ENST00000308987 NEO1Q92859 1461 aa7.84□□□□□ -1.15
CKS1B-201ENST00000308987 TRIM66O15016 1216 aa7.84□□□□□ -1.15
CKS1B-201ENST00000308987 RHOQP17081 205 aa7.84□□□□□ -1.15
CKS1B-201ENST00000308987 CTDSPL2Q05D32 466 aa7.84□□□□□ -1.15
CKS1B-201ENST00000308987 DBN1Q16643 649 aa7.84□□□□□ -1.15
CKS1B-201ENST00000308987 FOXR1Q6PIV2 292 aa7.84□□□□□ -1.15
CKS1B-201ENST00000308987 ZNF784Q8NCA9 323 aaPredicted RBP7.84□□□□□ -1.15
CKS1B-201ENST00000308987 GMCL1Q96IK5 515 aa7.84□□□□□ -1.15
CKS1B-201ENST00000308987 PSMG3-AS1Q96PY0 264 aa7.84□□□□□ -1.15
CKS1B-201ENST00000308987 FKBPLQ9UIM3 349 aa7.84□□□□□ -1.15
CKS1B-201ENST00000308987 ARHGEF40Q8TER5 1519 aa7.83□□□□□ -1.16
CKS1B-201ENST00000308987 LMTK3Q96Q04 1460 aa7.83□□□□□ -1.16
CKS1B-201ENST00000308987 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.83□□□□□ -1.16
CKS1B-201ENST00000308987 LILRA1O75019 489 aa7.83□□□□□ -1.16
CKS1B-201ENST00000308987 BAG6P46379 1132 aa7.83□□□□□ -1.16
CKS1B-201ENST00000308987 ZC3H15Q8WU90 426 aaKnown RBP7.83□□□□□ -1.16
CKS1B-201ENST00000308987 OCSTAMPQ9BR26 566 aa7.83□□□□□ -1.16
CKS1B-201ENST00000308987 PCF11O94913 1555 aaKnown RBP7.83□□□□□ -1.16
CKS1B-201ENST00000308987 TTC37Q6PGP7 1564 aa7.83□□□□□ -1.16
CKS1B-201ENST00000308987 KRTAP9-2Q9BYQ4 174 aa7.82□□□□□ -1.16
CKS1B-201ENST00000308987 PHLDB1Q86UU1 1377 aa7.82□□□□□ -1.16
CKS1B-201ENST00000308987 FHOD3Q2V2M9 1422 aa7.81□□□□□ -1.16
CKS1B-201ENST00000308987 KRBA1A5PL33 1030 aa7.81□□□□□ -1.16
CKS1B-201ENST00000308987 FURINP09958 794 aa7.81□□□□□ -1.16
CKS1B-201ENST00000308987 RAB15P59190 212 aa7.81□□□□□ -1.16
CKS1B-201ENST00000308987 RIPOR1Q6ZS17 1223 aa7.81□□□□□ -1.16
CKS1B-201ENST00000308987 FBXO41Q8TF61 875 aa7.81□□□□□ -1.16
CKS1B-201ENST00000308987 GTPBP3Q969Y2 492 aaKnown RBP7.81□□□□□ -1.16
CKS1B-201ENST00000308987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.81□□□□□ -1.162e-6■■□□□ 13.9
CKS1B-201ENST00000308987 ERVH48-1M5A8F1 160 aa7.8□□□□□ -1.16
CKS1B-201ENST00000308987 RNF144AP50876 292 aaPredicted RBP7.8□□□□□ -1.16
CKS1B-201ENST00000308987 ADAM32Q8TC27 787 aa7.8□□□□□ -1.16
CKS1B-201ENST00000308987 LRRN4Q8WUT4 740 aa7.8□□□□□ -1.16
CKS1B-201ENST00000308987 LRRC4BQ9NT99 713 aa7.8□□□□□ -1.16
CKS1B-201ENST00000308987 FER1L4A9Z1Z3 1794 aa7.79□□□□□ -1.16
CKS1B-201ENST00000308987 YEATS2Q9ULM3 1422 aa7.79□□□□□ -1.16
CKS1B-201ENST00000308987 ZMYM4Q5VZL5 1548 aa7.79□□□□□ -1.16
CKS1B-201ENST00000308987 PTK2Q05397 1052 aa7.79□□□□□ -1.16
CKS1B-201ENST00000308987 AKNAQ7Z591 1439 aa7.78□□□□□ -1.16
CKS1B-201ENST00000308987 CDK13Q14004 1512 aaKnown RBP7.78□□□□□ -1.16
CKS1B-201ENST00000308987 LRRIQ1Q96JM4 1722 aa7.78□□□□□ -1.16
CKS1B-201ENST00000308987 KRTAP9-6A0A140TA67 174 aa7.78□□□□□ -1.16
CKS1B-201ENST00000308987 OIP5O43482 229 aa7.78□□□□□ -1.16
CKS1B-201ENST00000308987 SNRPNP63162 240 aaKnown RBP7.78□□□□□ -1.16
CKS1B-201ENST00000308987 NR6A1Q15406 480 aa7.78□□□□□ -1.16
CKS1B-201ENST00000308987 NBPF20Q3BBV1 942 aa7.78□□□□□ -1.16
CKS1B-201ENST00000308987 DENND4BO75064 1496 aaPredicted RBP7.78□□□□□ -1.16
CKS1B-201ENST00000308987 HECW1Q76N89 1606 aa7.78□□□□□ -1.16
CKS1B-201ENST00000308987 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
CKS1B-201ENST00000308987 CFAP74Q9C0B2 1584 aa7.77□□□□□ -1.17
CKS1B-201ENST00000308987 FANCAO15360 1455 aa7.77□□□□□ -1.17
CKS1B-201ENST00000308987 RANGAP1P46060 587 aaPredicted RBP7.77□□□□□ -1.17
CKS1B-201ENST00000308987 CLK2P49760 499 aaKnown RBP7.77□□□□□ -1.17
CKS1B-201ENST00000308987 HSPA2P54652 639 aa7.77□□□□□ -1.17
CKS1B-201ENST00000308987 STRCQ7RTU9 1775 aa7.76□□□□□ -1.17
CKS1B-201ENST00000308987 H7C1W4 665 aa7.76□□□□□ -1.17
CKS1B-201ENST00000308987 MX2P20592 715 aa7.76□□□□□ -1.17
CKS1B-201ENST00000308987 AK7Q96M32 723 aa7.76□□□□□ -1.17
CKS1B-201ENST00000308987 TRERF1Q96PN7 1200 aa7.76□□□□□ -1.17
CKS1B-201ENST00000308987 GAS2L1Q99501 681 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms