RNA–Protein interactions for RNA: ENST00000308941.9

PHYHD1-201, Transcript of phytanoyl-CoA dioxygenase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PHYHD1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHYHD1-201ENST00000308941 MRC1P22897 1456 aa22.81■■□□□ 1.24
PHYHD1-201ENST00000308941 FCHSD2O94868 740 aa22.8■■□□□ 1.24
PHYHD1-201ENST00000308941 SMARCC1Q92922 1105 aaPredicted RBP22.8■■□□□ 1.24
PHYHD1-201ENST00000308941 LRP5O75197 1615 aa22.8■■□□□ 1.24
PHYHD1-201ENST00000308941 DLG5Q8TDM6 1919 aa22.8■■□□□ 1.24
PHYHD1-201ENST00000308941 LOC102724428A0A0B4J2F2 783 aa22.8■■□□□ 1.24
PHYHD1-201ENST00000308941 SIK1P57059 783 aa22.8■■□□□ 1.24
PHYHD1-201ENST00000308941 SMIM5Q71RC9 77 aa22.8■■□□□ 1.24
PHYHD1-201ENST00000308941 GAS2L2Q8NHY3 880 aa22.8■■□□□ 1.24
PHYHD1-201ENST00000308941 SLC4A9Q96Q91 983 aa22.8■■□□□ 1.24
PHYHD1-201ENST00000308941 C4BP0C0L5 1744 aa22.79■■□□□ 1.24
PHYHD1-201ENST00000308941 ITPK1Q13572 414 aa22.79■■□□□ 1.24
PHYHD1-201ENST00000308941 IL17REQ8NFR9 667 aa22.79■■□□□ 1.24
PHYHD1-201ENST00000308941 ZBTB7AO95365 584 aa22.78■■□□□ 1.24
PHYHD1-201ENST00000308941 RBM42Q9BTD8 480 aaKnown RBP22.78■■□□□ 1.24
PHYHD1-201ENST00000308941 SLC52A2Q9HAB3 445 aa22.78■■□□□ 1.24
PHYHD1-201ENST00000308941 SIPA1L3O60292 1781 aaPredicted RBP22.78■■□□□ 1.24
PHYHD1-201ENST00000308941 QSER1Q2KHR3 1735 aa22.77■■□□□ 1.24
PHYHD1-201ENST00000308941 GNAT3A8MTJ3 354 aa22.77■■□□□ 1.24
PHYHD1-201ENST00000308941 AMIGO3Q86WK7 504 aa22.77■■□□□ 1.24
PHYHD1-201ENST00000308941 LINC00116Q8NCU8 138 aa22.77■■□□□ 1.24
PHYHD1-201ENST00000308941 PTCD1O75127 700 aaKnown RBP22.76■■□□□ 1.23
PHYHD1-201ENST00000308941 SLC39A6Q13433 755 aa22.76■■□□□ 1.23
PHYHD1-201ENST00000308941 PLEKHF1Q96S99 279 aa22.76■■□□□ 1.23
PHYHD1-201ENST00000308941 PNPLA7Q6ZV29 1317 aa22.76■■□□□ 1.23
PHYHD1-201ENST00000308941 TFCP2L1Q9NZI6 479 aa22.76■■□□□ 1.23
PHYHD1-201ENST00000308941 ATP6V1AP38606 617 aa22.75■■□□□ 1.23
PHYHD1-201ENST00000308941 DCTN1Q14203 1278 aa22.75■■□□□ 1.23
PHYHD1-201ENST00000308941 CCDC184Q52MB2 194 aa22.75■■□□□ 1.23
PHYHD1-201ENST00000308941 UBR3Q6ZT12 1888 aa22.74■■□□□ 1.23
PHYHD1-201ENST00000308941 ATF5Q9Y2D1 282 aaPredicted RBP22.74■■□□□ 1.23
PHYHD1-201ENST00000308941 COL5A3P25940 1745 aaPredicted RBP22.74■■□□□ 1.23
PHYHD1-201ENST00000308941 TJP1Q07157 1748 aa22.74■■□□□ 1.23
PHYHD1-201ENST00000308941 MCM10Q7L590 875 aa22.73■■□□□ 1.23
PHYHD1-201ENST00000308941 CCDC146Q8IYE0 955 aa22.72■■□□□ 1.23
PHYHD1-201ENST00000308941 KCPQ6ZWJ8 1503 aa22.71■■□□□ 1.23
PHYHD1-201ENST00000308941 ZNF831Q5JPB2 1677 aa22.71■■□□□ 1.23
PHYHD1-201ENST00000308941 MYH14Q7Z406 1995 aaKnown RBP22.71■■□□□ 1.23
PHYHD1-201ENST00000308941 UBR2Q8IWV8 1755 aa22.71■■□□□ 1.23
PHYHD1-201ENST00000308941 CEMIPQ8WUJ3 1361 aa22.71■■□□□ 1.23
PHYHD1-201ENST00000308941 COL23A1Q86Y22 540 aaPredicted RBP22.69■■□□□ 1.22
PHYHD1-201ENST00000308941 PHF14O94880 888 aa22.68■■□□□ 1.22
PHYHD1-201ENST00000308941 TEFQ10587 303 aa22.68■■□□□ 1.22
PHYHD1-201ENST00000308941 AK7Q96M32 723 aa22.68■■□□□ 1.22
PHYHD1-201ENST00000308941 SPON1Q9HCB6 807 aa22.68■■□□□ 1.22
PHYHD1-201ENST00000308941 THUMPD2Q9BTF0 503 aaKnown RBP22.67■■□□□ 1.22
PHYHD1-201ENST00000308941 ADAMTS8Q9UP79 889 aa22.67■■□□□ 1.22
PHYHD1-201ENST00000308941 MSH5O43196 834 aa22.67■■□□□ 1.22
PHYHD1-201ENST00000308941 KCNQ3O43525 872 aa22.67■■□□□ 1.22
PHYHD1-201ENST00000308941 MAPK8IP3Q9UPT6 1336 aa22.66■■□□□ 1.22
PHYHD1-201ENST00000308941 PTGER2P43116 358 aa22.66■■□□□ 1.22
PHYHD1-201ENST00000308941 WDR43Q15061 677 aaKnown RBP eCLIP22.66■■□□□ 1.22
PHYHD1-201ENST00000308941 NFE2L2Q16236 605 aa22.66■■□□□ 1.22
PHYHD1-201ENST00000308941 RTF1Q92541 710 aaKnown RBP22.66■■□□□ 1.22
PHYHD1-201ENST00000308941 GNPATO15228 680 aa22.65■■□□□ 1.22
PHYHD1-201ENST00000308941 RRP7AQ9Y3A4 280 aaKnown RBP22.65■■□□□ 1.22
PHYHD1-201ENST00000308941 CICQ96RK0 1608 aaPredicted RBP22.64■■□□□ 1.22
PHYHD1-201ENST00000308941 DNAJC10Q8IXB1 793 aa22.64■■□□□ 1.22
PHYHD1-201ENST00000308941 MTFR1LQ9H019 292 aa22.64■■□□□ 1.22
PHYHD1-201ENST00000308941 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.63■■□□□ 1.21
PHYHD1-201ENST00000308941 NEFMP07197 916 aa22.63■■□□□ 1.21
PHYHD1-201ENST00000308941 MSL1Q68DK7 614 aa22.63■■□□□ 1.21
PHYHD1-201ENST00000308941 ANP32CO43423 234 aa22.63■■□□□ 1.21
PHYHD1-201ENST00000308941 ZNF790Q6PG37 636 aa22.62■■□□□ 1.21
PHYHD1-201ENST00000308941 ZNF496Q96IT1 587 aaPredicted RBP22.62■■□□□ 1.21
PHYHD1-201ENST00000308941 SGIP1Q9BQI5 828 aa22.62■■□□□ 1.21
PHYHD1-201ENST00000308941 MIS18AQ9NYP9 233 aa22.62■■□□□ 1.21
PHYHD1-201ENST00000308941 COL24A1Q17RW2 1714 aa22.62■■□□□ 1.21
PHYHD1-201ENST00000308941 BTBD11A6QL63 1104 aa22.61■■□□□ 1.21
PHYHD1-201ENST00000308941 CRKLP46109 303 aaKnown RBP22.6■■□□□ 1.21
PHYHD1-201ENST00000308941 C4AP0C0L4 1744 aa22.6■■□□□ 1.21
PHYHD1-201ENST00000308941 SENP3-EIF4A1A0A087X0R7 540 aa22.59■■□□□ 1.21
PHYHD1-201ENST00000308941 HTATSF1O43719 755 aaKnown RBP22.59■■□□□ 1.21
PHYHD1-201ENST00000308941 TMPOP42166 694 aaKnown RBP22.59■■□□□ 1.21
PHYHD1-201ENST00000308941 NEUROD2Q15784 382 aa22.59■■□□□ 1.21
PHYHD1-201ENST00000308941 TTC5Q8N0Z6 440 aa22.59■■□□□ 1.21
PHYHD1-201ENST00000308941 PNNQ9H307 717 aaKnown RBP22.59■■□□□ 1.21
PHYHD1-201ENST00000308941 CNTNAP4Q9C0A0 1308 aa22.59■■□□□ 1.21
PHYHD1-201ENST00000308941 RIPK4P57078 832 aa22.59■■□□□ 1.21
PHYHD1-201ENST00000308941 PPP1R1BQ9UD71 204 aaPredicted RBP22.59■■□□□ 1.21
PHYHD1-201ENST00000308941 INTS5Q6P9B9 1019 aaKnown RBP22.58■■□□□ 1.2
PHYHD1-201ENST00000308941 RUNDC1Q96C34 613 aa22.58■■□□□ 1.2
PHYHD1-201ENST00000308941 CYP19A1P11511 503 aaPredicted RBP22.57■■□□□ 1.2
PHYHD1-201ENST00000308941 SSFA2P28290 1259 aa22.57■■□□□ 1.2
PHYHD1-201ENST00000308941 KDM3BQ7LBC6 1761 aa22.57■■□□□ 1.2
PHYHD1-201ENST00000308941 PRAMEF22A3QJZ6 481 aa22.56■■□□□ 1.2
PHYHD1-201ENST00000308941 RC3H1Q5TC82 1133 aaKnown RBP22.56■■□□□ 1.2
PHYHD1-201ENST00000308941 HEG1Q9ULI3 1381 aa22.56■■□□□ 1.2
PHYHD1-201ENST00000308941 SLC16A10Q8TF71 515 aa22.55■■□□□ 1.2
PHYHD1-201ENST00000308941 MRS2Q9HD23 443 aa22.55■■□□□ 1.2
PHYHD1-201ENST00000308941 RTCBQ9Y3I0 505 aaKnown RBP22.55■■□□□ 1.2
PHYHD1-201ENST00000308941 TAF7Q15545 349 aaPredicted RBP22.55■■□□□ 1.2
PHYHD1-201ENST00000308941 GOLGB1Q14789 3259 aaKnown RBP22.54■■□□□ 1.2
PHYHD1-201ENST00000308941 RPS6KA4O75676 772 aa22.54■■□□□ 1.2
PHYHD1-201ENST00000308941 FLAD1Q8NFF5 587 aa22.54■■□□□ 1.2
PHYHD1-201ENST00000308941 ARHGEF1Q92888 912 aaKnown RBP22.54■■□□□ 1.2
PHYHD1-201ENST00000308941 ZBTB1Q9Y2K1 713 aa22.54■■□□□ 1.2
PHYHD1-201ENST00000308941 FMNL2Q96PY5 1086 aa22.53■■□□□ 1.2
PHYHD1-201ENST00000308941 CCDC87Q9NVE4 849 aa22.53■■□□□ 1.2
PHYHD1-201ENST00000308941 VSIG10Q8N0Z9 540 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms