RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 RTF1Q92541 710 aaKnown RBP21.78■■□□□ 1.08
RETREG1-201ENST00000306320 MEIS3Q99687 375 aa21.78■■□□□ 1.08
RETREG1-201ENST00000306320 SMAP1Q8IYB5 467 aaPredicted RBP21.77■■□□□ 1.08
RETREG1-201ENST00000306320 TSPY26PQ9H489 355 aa21.77■■□□□ 1.08
RETREG1-201ENST00000306320 TMEM2Q9UHN6 1383 aa21.77■■□□□ 1.08
RETREG1-201ENST00000306320 CCDC94Q9BW85 323 aaPredicted RBP21.76■■□□□ 1.07
RETREG1-201ENST00000306320 CASC1Q6TDU7 716 aa21.75■■□□□ 1.07
RETREG1-201ENST00000306320 KCNA6P17658 529 aa21.75■■□□□ 1.07
RETREG1-201ENST00000306320 UPF3BQ9BZI7 483 aaKnown RBP21.75■■□□□ 1.07
RETREG1-201ENST00000306320 NCOA3Q9Y6Q9 1424 aa21.75■■□□□ 1.07
RETREG1-201ENST00000306320 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.75■■□□□ 1.07
RETREG1-201ENST00000306320 ABTB2Q8N961 1025 aa21.75■■□□□ 1.07
RETREG1-201ENST00000306320 BBXQ8WY36 941 aaPredicted RBP21.75■■□□□ 1.07
RETREG1-201ENST00000306320 CPSF1Q10570 1443 aaKnown RBP21.74■■□□□ 1.07
RETREG1-201ENST00000306320 ADGRB2O60241 1585 aa21.74■■□□□ 1.07
RETREG1-201ENST00000306320 USP32Q8NFA0 1604 aa21.74■■□□□ 1.07
RETREG1-201ENST00000306320 ZNF853P0CG23 659 aa21.74■■□□□ 1.07
RETREG1-201ENST00000306320 ZNF771Q7L3S4 317 aaPredicted RBP21.74■■□□□ 1.07
RETREG1-201ENST00000306320 EYA1Q99502 592 aa21.74■■□□□ 1.07
RETREG1-201ENST00000306320 LMOD3Q0VAK6 560 aa21.73■■□□□ 1.07
RETREG1-201ENST00000306320 GADD45BO75293 160 aaPredicted RBP21.72■■□□□ 1.07
RETREG1-201ENST00000306320 EIF2S2P20042 333 aaKnown RBP21.72■■□□□ 1.07
RETREG1-201ENST00000306320 GCC1Q96CN9 775 aa21.72■■□□□ 1.07
RETREG1-201ENST00000306320 ATP2B3Q16720 1220 aa21.72■■□□□ 1.07
RETREG1-201ENST00000306320 VGLL3A8MV65 326 aa21.72■■□□□ 1.07
RETREG1-201ENST00000306320 HCLS1P14317 486 aaPredicted RBP21.72■■□□□ 1.07
RETREG1-201ENST00000306320 U2AF2P26368 475 aaKnown RBP eCLIP21.72■■□□□ 1.07
RETREG1-201ENST00000306320 MTERF4Q7Z6M4 381 aaKnown RBP21.72■■□□□ 1.07
RETREG1-201ENST00000306320 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
RETREG1-201ENST00000306320 INTS3Q68E01 1043 aaKnown RBP21.71■■□□□ 1.07
RETREG1-201ENST00000306320 RILPL2Q969X0 211 aa21.71■■□□□ 1.07
RETREG1-201ENST00000306320 ZDHHC9Q9Y397 364 aa21.71■■□□□ 1.07
RETREG1-201ENST00000306320 API5Q9BZZ5 524 aaKnown RBP21.7■■□□□ 1.07
RETREG1-201ENST00000306320 CGNQ9P2M7 1197 aaKnown RBP21.7■■□□□ 1.07
RETREG1-201ENST00000306320 EXOC6BQ9Y2D4 811 aa21.7■■□□□ 1.07
RETREG1-201ENST00000306320 TRIM6-TRIM34B2RNG4 842 aa21.7■■□□□ 1.06
RETREG1-201ENST00000306320 ANXA1P04083 346 aa21.7■■□□□ 1.06
RETREG1-201ENST00000306320 NOLC1Q14978 699 aaKnown RBP eCLIP21.7■■□□□ 1.06
RETREG1-201ENST00000306320 PDLIM2Q96JY6 352 aa21.7■■□□□ 1.06
RETREG1-201ENST00000306320 KIF3AQ9Y496 699 aa21.7■■□□□ 1.06
RETREG1-201ENST00000306320 ATP7BP35670 1465 aa21.69■■□□□ 1.06
RETREG1-201ENST00000306320 SDSP20132 328 aa21.69■■□□□ 1.06
RETREG1-201ENST00000306320 PLEKHM2Q8IWE5 1019 aa21.69■■□□□ 1.06
RETREG1-201ENST00000306320 ANO2Q9NQ90 1003 aa21.69■■□□□ 1.06
RETREG1-201ENST00000306320 ADCY5O95622 1261 aa21.68■■□□□ 1.06
RETREG1-201ENST00000306320 PDCL2Q8N4E4 241 aa21.68■■□□□ 1.06
RETREG1-201ENST00000306320 USP26Q9BXU7 913 aa21.68■■□□□ 1.06
RETREG1-201ENST00000306320 ZBTB22O15209 634 aa21.68■■□□□ 1.06
RETREG1-201ENST00000306320 FKBP5Q13451 457 aaPredicted RBP21.67■■□□□ 1.06
RETREG1-201ENST00000306320 HS1BP3Q53T59 392 aa21.67■■□□□ 1.06
RETREG1-201ENST00000306320 FIBPO43427 364 aa21.67■■□□□ 1.06
RETREG1-201ENST00000306320 CHAF1AQ13111 956 aaPredicted RBP21.67■■□□□ 1.06
RETREG1-201ENST00000306320 MED14O60244 1454 aa21.67■■□□□ 1.06
RETREG1-201ENST00000306320 ZSCAN20P17040 1043 aaPredicted RBP21.67■■□□□ 1.06
RETREG1-201ENST00000306320 TERF1P54274 439 aa21.67■■□□□ 1.06
RETREG1-201ENST00000306320 PTPRUQ92729 1446 aa21.66■■□□□ 1.06
RETREG1-201ENST00000306320 DMTNQ08495 405 aa21.66■■□□□ 1.06
RETREG1-201ENST00000306320 ZNF592Q92610 1267 aa21.66■■□□□ 1.06
RETREG1-201ENST00000306320 DRC7Q8IY82 874 aa21.65■■□□□ 1.06
RETREG1-201ENST00000306320 ZNF710Q8N1W2 664 aa21.65■■□□□ 1.06
RETREG1-201ENST00000306320 MYRIPQ8NFW9 859 aa21.65■■□□□ 1.06
RETREG1-201ENST00000306320 TMX3Q96JJ7 454 aa21.65■■□□□ 1.06
RETREG1-201ENST00000306320 SETD1BQ9UPS6 1966 aaKnown RBP21.65■■□□□ 1.06
RETREG1-201ENST00000306320 MSH6P52701 1360 aa21.65■■□□□ 1.06
RETREG1-201ENST00000306320 CHL1O00533 1208 aa21.65■■□□□ 1.06
RETREG1-201ENST00000306320 ADAMTS13Q76LX8 1427 aa21.65■■□□□ 1.06
RETREG1-201ENST00000306320 ABCC4O15439 1325 aa21.64■■□□□ 1.06
RETREG1-201ENST00000306320 SYAP1Q96A49 352 aaPredicted RBP21.64■■□□□ 1.06
RETREG1-201ENST00000306320 TTC22Q5TAA0 569 aa21.64■■□□□ 1.05
RETREG1-201ENST00000306320 BCL2L12Q9HB09 334 aa21.64■■□□□ 1.05
RETREG1-201ENST00000306320 ESCO1Q5FWF5 840 aa21.63■■□□□ 1.05
RETREG1-201ENST00000306320 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
RETREG1-201ENST00000306320 MBD3O95983 291 aa21.63■■□□□ 1.05
RETREG1-201ENST00000306320 SPATA31D1Q6ZQQ2 1576 aa21.63■■□□□ 1.05
RETREG1-201ENST00000306320 KIF20BQ96Q89 1820 aa21.62■■□□□ 1.05
RETREG1-201ENST00000306320 CWC22Q9HCG8 908 aaKnown RBP21.62■■□□□ 1.05
RETREG1-201ENST00000306320 NPHP1O15259 732 aa21.62■■□□□ 1.05
RETREG1-201ENST00000306320 MAP4K4O95819 1239 aaPredicted RBP21.62■■□□□ 1.05
RETREG1-201ENST00000306320 TRERF1Q96PN7 1200 aa21.61■■□□□ 1.05
RETREG1-201ENST00000306320 CDK11BP21127 795 aaKnown RBP21.61■■□□□ 1.05
RETREG1-201ENST00000306320 GIMAP6Q6P9H5 292 aa21.61■■□□□ 1.05
RETREG1-201ENST00000306320 REC8O95072 547 aa21.61■■□□□ 1.05
RETREG1-201ENST00000306320 CEP85Q6P2H3 762 aa21.61■■□□□ 1.05
RETREG1-201ENST00000306320 USP48Q86UV5 1035 aa21.61■■□□□ 1.05
RETREG1-201ENST00000306320 PLEKHG3A1L390 1219 aa21.6■■□□□ 1.05
RETREG1-201ENST00000306320 NCBP3Q53F19 620 aaKnown RBP21.6■■□□□ 1.05
RETREG1-201ENST00000306320 FGD1P98174 961 aa21.6■■□□□ 1.05
RETREG1-201ENST00000306320 ARHGAP45Q92619 1136 aa21.6■■□□□ 1.05
RETREG1-201ENST00000306320 NRXN3Q9Y4C0 1643 aa21.59■■□□□ 1.05
RETREG1-201ENST00000306320 AATKQ6ZMQ8 1374 aa21.59■■□□□ 1.05
RETREG1-201ENST00000306320 STK31Q9BXU1 1019 aa21.59■■□□□ 1.05
RETREG1-201ENST00000306320 IL1RAPL2Q9NP60 686 aa21.59■■□□□ 1.05
RETREG1-201ENST00000306320 USP6P35125 1406 aa21.59■■□□□ 1.05
RETREG1-201ENST00000306320 CDK12Q9NYV4 1490 aaPredicted RBP21.59■■□□□ 1.05
RETREG1-201ENST00000306320 DDX54Q8TDD1 881 aaKnown RBP21.59■■□□□ 1.05
RETREG1-201ENST00000306320 PHAXQ9H814 394 aaKnown RBP21.59■■□□□ 1.05
RETREG1-201ENST00000306320 MCM5P33992 734 aa21.58■■□□□ 1.05
RETREG1-201ENST00000306320 PLCD3Q8N3E9 789 aa21.58■■□□□ 1.05
RETREG1-201ENST00000306320 DLC1Q96QB1 1528 aa21.58■■□□□ 1.05
RETREG1-201ENST00000306320 IBTKQ9P2D0 1353 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms