RNA–Protein interactions for RNA: ENST00000306049.9

TEFM-201, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 2

Gene TEFM, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-201ENST00000306049 PCDH11YQ9BZA8 1340 aa13.31□□□□□ -0.28
TEFM-201ENST00000306049 KIF13BQ9NQT8 1826 aa13.3□□□□□ -0.28
TEFM-201ENST00000306049 MYCNP04198 464 aaPredicted RBP13.3□□□□□ -0.28
TEFM-201ENST00000306049 MPRIPQ6WCQ1 1025 aa13.3□□□□□ -0.28
TEFM-201ENST00000306049 ST20-MTHFSA0A0A6YYL1 179 aa13.29□□□□□ -0.28
TEFM-201ENST00000306049 GGNBP2Q9H3C7 697 aa13.29□□□□□ -0.28
TEFM-201ENST00000306049 N4BP2Q86UW6 1770 aaPredicted RBP13.29□□□□□ -0.28
TEFM-201ENST00000306049 INSRP06213 1382 aa13.29□□□□□ -0.28
TEFM-201ENST00000306049 TONSLQ96HA7 1378 aa13.29□□□□□ -0.28
TEFM-201ENST00000306049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.28□□□□□ -0.28
TEFM-201ENST00000306049 FYB1O15117 783 aa13.28□□□□□ -0.28
TEFM-201ENST00000306049 CYP27B1O15528 508 aa13.28□□□□□ -0.28
TEFM-201ENST00000306049 AMIGO3Q86WK7 504 aa13.28□□□□□ -0.28
TEFM-201ENST00000306049 SMARCC1Q92922 1105 aaPredicted RBP13.28□□□□□ -0.28
TEFM-201ENST00000306049 KDM2BQ8NHM5 1336 aa13.28□□□□□ -0.28
TEFM-201ENST00000306049 NSD3Q9BZ95 1437 aa13.28□□□□□ -0.28
TEFM-201ENST00000306049 KIAA1551Q9HCM1 1747 aa13.27□□□□□ -0.28
TEFM-201ENST00000306049 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
TEFM-201ENST00000306049 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
TEFM-201ENST00000306049 TGFB2P61812 414 aa13.27□□□□□ -0.29
TEFM-201ENST00000306049 HSP90AB2PQ58FF8 381 aa13.27□□□□□ -0.29
TEFM-201ENST00000306049 C9orf131Q5VYM1 1079 aa13.27□□□□□ -0.29
TEFM-201ENST00000306049 SMIM5Q71RC9 77 aa13.27□□□□□ -0.29
TEFM-201ENST00000306049 PLEKHG2Q9H7P9 1386 aa13.27□□□□□ -0.29
TEFM-201ENST00000306049 PXDNLA1KZ92 1463 aa13.26□□□□□ -0.29
TEFM-201ENST00000306049 SSFA2P28290 1259 aa13.26□□□□□ -0.29
TEFM-201ENST00000306049 FLT4P35916 1363 aa13.26□□□□□ -0.29
TEFM-201ENST00000306049 SMC1BQ8NDV3 1235 aa13.26□□□□□ -0.29
TEFM-201ENST00000306049 RRAGCQ9HB90 399 aa13.26□□□□□ -0.29
TEFM-201ENST00000306049 ANKRD26Q9UPS8 1709 aa13.26□□□□□ -0.29
TEFM-201ENST00000306049 BRCA1P38398 1863 aaKnown RBP13.25□□□□□ -0.29
TEFM-201ENST00000306049 KIF24Q5T7B8 1368 aa13.25□□□□□ -0.29
TEFM-201ENST00000306049 FCHSD2O94868 740 aa13.25□□□□□ -0.29
TEFM-201ENST00000306049 PIGBQ92521 554 aa13.25□□□□□ -0.29
TEFM-201ENST00000306049 KCPQ6ZWJ8 1503 aa13.24□□□□□ -0.29
TEFM-201ENST00000306049 MMP10P09238 476 aa13.24□□□□□ -0.29
TEFM-201ENST00000306049 NCAPD2Q15021 1401 aa13.23□□□□□ -0.29
TEFM-201ENST00000306049 ABCB7O75027 752 aa13.23□□□□□ -0.29
TEFM-201ENST00000306049 LINC00116Q8NCU8 138 aa13.23□□□□□ -0.29
TEFM-201ENST00000306049 PCDH10Q9P2E7 1040 aa13.23□□□□□ -0.29
TEFM-201ENST00000306049 TNRC6CQ9HCJ0 1690 aaKnown RBP13.23□□□□□ -0.29
TEFM-201ENST00000306049 LOC102724428A0A0B4J2F2 783 aa13.22□□□□□ -0.29
TEFM-201ENST00000306049 SIK1P57059 783 aa13.22□□□□□ -0.29
TEFM-201ENST00000306049 NKX1-1Q15270 411 aaPredicted RBP13.22□□□□□ -0.29
TEFM-201ENST00000306049 ARFGEF1Q9Y6D6 1849 aa13.22□□□□□ -0.29
TEFM-201ENST00000306049 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
TEFM-201ENST00000306049 DPEP1P16444 411 aa13.21□□□□□ -0.29
TEFM-201ENST00000306049 TMF1P82094 1093 aa13.21□□□□□ -0.29
TEFM-201ENST00000306049 RNF181Q9P0P0 153 aa13.21□□□□□ -0.29
TEFM-201ENST00000306049 EMILIN1Q9Y6C2 1016 aa13.21□□□□□ -0.29
TEFM-201ENST00000306049 MYH14Q7Z406 1995 aaKnown RBP13.21□□□□□ -0.29
TEFM-201ENST00000306049 COL5A3P25940 1745 aaPredicted RBP13.21□□□□□ -0.3
TEFM-201ENST00000306049 GNPATO15228 680 aa13.2□□□□□ -0.3
TEFM-201ENST00000306049 ITPK1Q13572 414 aa13.2□□□□□ -0.3
TEFM-201ENST00000306049 TMOD3Q9NYL9 352 aa13.2□□□□□ -0.3
TEFM-201ENST00000306049 ASAP1Q9ULH1 1129 aa13.2□□□□□ -0.3
TEFM-201ENST00000306049 SPG7Q9UQ90 795 aa13.2□□□□□ -0.3
TEFM-201ENST00000306049 ZNF831Q5JPB2 1677 aa13.2□□□□□ -0.3
TEFM-201ENST00000306049 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
TEFM-201ENST00000306049 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
TEFM-201ENST00000306049 CCDC87Q9NVE4 849 aa13.19□□□□□ -0.3
TEFM-201ENST00000306049 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
TEFM-201ENST00000306049 NLGN1Q8N2Q7 840 aa13.18□□□□□ -0.3
TEFM-201ENST00000306049 SBF1O95248 1867 aa13.18□□□□□ -0.3
TEFM-201ENST00000306049 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
TEFM-201ENST00000306049 CARD14Q9BXL6 1004 aa13.17□□□□□ -0.3
TEFM-201ENST00000306049 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.3
TEFM-201ENST00000306049 PIM2Q9P1W9 311 aa13.17□□□□□ -0.3
TEFM-201ENST00000306049 PHKG2P15735 406 aa13.16□□□□□ -0.3
TEFM-201ENST00000306049 IFNL2Q8IZJ0 200 aa13.16□□□□□ -0.3
TEFM-201ENST00000306049 EYA1Q99502 592 aa13.16□□□□□ -0.3
TEFM-201ENST00000306049 ATG3Q9NT62 314 aa13.16□□□□□ -0.3
TEFM-201ENST00000306049 PARP3Q9Y6F1 533 aa13.16□□□□□ -0.3
TEFM-201ENST00000306049 WASHC2AQ641Q2 1341 aa13.15□□□□□ -0.3
TEFM-201ENST00000306049 VEGFAP15692 232 aaPredicted RBP13.15□□□□□ -0.3
TEFM-201ENST00000306049 KCNA3P22001 575 aa13.15□□□□□ -0.3
TEFM-201ENST00000306049 CDCA8Q53HL2 280 aa13.15□□□□□ -0.3
TEFM-201ENST00000306049 DALRD3Q5D0E6 543 aaKnown RBP13.15□□□□□ -0.3
TEFM-201ENST00000306049 TRAPPC3LQ5T215 181 aa13.15□□□□□ -0.3
TEFM-201ENST00000306049 DCAF5Q96JK2 942 aa13.15□□□□□ -0.3
TEFM-201ENST00000306049 KDRP35968 1356 aa13.15□□□□□ -0.3
TEFM-201ENST00000306049 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
TEFM-201ENST00000306049 RTCBQ9Y3I0 505 aaKnown RBP13.14□□□□□ -0.31
TEFM-201ENST00000306049 CCDC88AQ3V6T2 1871 aa13.13□□□□□ -0.31
TEFM-201ENST00000306049 PRDM10Q9NQV6 1147 aa13.13□□□□□ -0.31
TEFM-201ENST00000306049 VIRMAQ69YN4 1812 aaKnown RBP13.13□□□□□ -0.31
TEFM-201ENST00000306049 FOXN1O15353 648 aa13.12□□□□□ -0.31
TEFM-201ENST00000306049 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
TEFM-201ENST00000306049 SLC4A9Q96Q91 983 aa13.12□□□□□ -0.31
TEFM-201ENST00000306049 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
TEFM-201ENST00000306049 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
TEFM-201ENST00000306049 ZC3H4Q9UPT8 1303 aaKnown RBP13.12□□□□□ -0.31
TEFM-201ENST00000306049 GLTPD2A6NH11 291 aa13.11□□□□□ -0.31
TEFM-201ENST00000306049 GYS1P13807 737 aa13.11□□□□□ -0.31
TEFM-201ENST00000306049 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
TEFM-201ENST00000306049 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
TEFM-201ENST00000306049 CNTNAP4Q9C0A0 1308 aa13.11□□□□□ -0.31
TEFM-201ENST00000306049 TJP1Q07157 1748 aa13.1□□□□□ -0.31
TEFM-201ENST00000306049 ERVV-2B6SEH9 535 aa13.1□□□□□ -0.31
TEFM-201ENST00000306049 RFC4P35249 363 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms