RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 PLEKHM2Q8IWE5 1019 aa19.23■□□□□ 0.67
CHAF1A-201ENST00000301280 UPF3BQ9BZI7 483 aaKnown RBP19.23■□□□□ 0.67
CHAF1A-201ENST00000301280 SDSP20132 328 aa19.23■□□□□ 0.67
CHAF1A-201ENST00000301280 SSFA2P28290 1259 aa19.23■□□□□ 0.67
CHAF1A-201ENST00000301280 CABLES1Q8TDN4 633 aa19.23■□□□□ 0.67
CHAF1A-201ENST00000301280 CHMP4BQ9H444 224 aaKnown RBP19.23■□□□□ 0.67
CHAF1A-201ENST00000301280 KIAA0232Q92628 1395 aa19.23■□□□□ 0.67
CHAF1A-201ENST00000301280 NWD1Q149M9 1564 aa19.22■□□□□ 0.67
CHAF1A-201ENST00000301280 SURF6O75683 361 aaKnown RBP19.22■□□□□ 0.67
CHAF1A-201ENST00000301280 FLIIQ13045 1269 aa19.22■□□□□ 0.67
CHAF1A-201ENST00000301280 CEP85Q6P2H3 762 aa19.22■□□□□ 0.67
CHAF1A-201ENST00000301280 ZNF142P52746 1687 aaPredicted RBP19.21■□□□□ 0.67
CHAF1A-201ENST00000301280 FAM43AQ8N2R8 423 aa19.21■□□□□ 0.67
CHAF1A-201ENST00000301280 GAS2L2Q8NHY3 880 aa19.21■□□□□ 0.67
CHAF1A-201ENST00000301280 CHD2O14647 1828 aaKnown RBP19.21■□□□□ 0.67
CHAF1A-201ENST00000301280 KDRP35968 1356 aa19.21■□□□□ 0.67
CHAF1A-201ENST00000301280 PNMA6EA0A0J9YXQ4 647 aa19.21■□□□□ 0.67
CHAF1A-201ENST00000301280 GNAT3A8MTJ3 354 aa19.21■□□□□ 0.67
CHAF1A-201ENST00000301280 CHL1O00533 1208 aa19.21■□□□□ 0.67
CHAF1A-201ENST00000301280 CRB1P82279 1406 aa19.21■□□□□ 0.67
CHAF1A-201ENST00000301280 ARHGEF10O15013 1369 aa19.2■□□□□ 0.66
CHAF1A-201ENST00000301280 CASC1Q6TDU7 716 aa19.2■□□□□ 0.66
CHAF1A-201ENST00000301280 ZNF530Q6P9A1 599 aaPredicted RBP19.2■□□□□ 0.66
CHAF1A-201ENST00000301280 GOLGA6L3A6NEY3 463 aa19.2■□□□□ 0.66
CHAF1A-201ENST00000301280 BMP2KLQ5H9B9 411 aa19.19■□□□□ 0.66
CHAF1A-201ENST00000301280 MCTP1Q6DN14 999 aa19.19■□□□□ 0.66
CHAF1A-201ENST00000301280 TNPO1Q92973 898 aaKnown RBP19.19■□□□□ 0.66
CHAF1A-201ENST00000301280 SIL1Q9H173 461 aa19.19■□□□□ 0.66
CHAF1A-201ENST00000301280 NLRP2Q9NX02 1062 aa19.19■□□□□ 0.66
CHAF1A-201ENST00000301280 MYL6BP14649 208 aa19.19■□□□□ 0.66
CHAF1A-201ENST00000301280 IL17REQ8NFR9 667 aa19.19■□□□□ 0.66
CHAF1A-201ENST00000301280 PHF8Q9UPP1 1060 aa19.19■□□□□ 0.66
CHAF1A-201ENST00000301280 HMMRO75330 724 aa19.18■□□□□ 0.66
CHAF1A-201ENST00000301280 RBM25P49756 843 aaKnown RBP19.18■□□□□ 0.66
CHAF1A-201ENST00000301280 NEK4P51957 841 aa19.18■□□□□ 0.66
CHAF1A-201ENST00000301280 PRAMEF22A3QJZ6 481 aa19.18■□□□□ 0.66
CHAF1A-201ENST00000301280 SLC39A6Q13433 755 aa19.18■□□□□ 0.66
CHAF1A-201ENST00000301280 ANKARQ7Z5J8 1434 aa19.18■□□□□ 0.66
CHAF1A-201ENST00000301280 UBTFL1P0CB47 393 aaPredicted RBP19.18■□□□□ 0.66
CHAF1A-201ENST00000301280 TAF7Q15545 349 aaPredicted RBP19.18■□□□□ 0.66
CHAF1A-201ENST00000301280 ATP10DQ9P241 1426 aa19.18■□□□□ 0.66
CHAF1A-201ENST00000301280 PKP1Q13835 747 aa19.17■□□□□ 0.66
CHAF1A-201ENST00000301280 GNAI2P04899 355 aa19.17■□□□□ 0.66
CHAF1A-201ENST00000301280 CHRNA2Q15822 529 aa19.17■□□□□ 0.66
CHAF1A-201ENST00000301280 NBPF6Q5VWK0 638 aa19.17■□□□□ 0.66
CHAF1A-201ENST00000301280 NBPF4Q96M43 638 aa19.17■□□□□ 0.66
CHAF1A-201ENST00000301280 HOXC9P31274 260 aa19.17■□□□□ 0.66
CHAF1A-201ENST00000301280 DDIT3P35638 169 aa19.17■□□□□ 0.66
CHAF1A-201ENST00000301280 MPNDQ8N594 471 aa19.17■□□□□ 0.66
CHAF1A-201ENST00000301280 ZGPATQ8N5A5 531 aaKnown RBP19.16■□□□□ 0.66
CHAF1A-201ENST00000301280 DDX49Q9Y6V7 483 aaKnown RBP19.16■□□□□ 0.66
CHAF1A-201ENST00000301280 TTC21AQ8NDW8 1320 aa19.15■□□□□ 0.66
CHAF1A-201ENST00000301280 PI4KAP2A4QPH2 592 aa19.15■□□□□ 0.66
CHAF1A-201ENST00000301280 PI4KAP1Q8N8J0 262 aa19.15■□□□□ 0.66
CHAF1A-201ENST00000301280 CHPF2Q9P2E5 772 aa19.15■□□□□ 0.66
CHAF1A-201ENST00000301280 LTN1O94822 1766 aa19.15■□□□□ 0.66
CHAF1A-201ENST00000301280 SRGAP3O43295 1099 aa19.15■□□□□ 0.66
CHAF1A-201ENST00000301280 HAP1P54257 671 aaPredicted RBP19.15■□□□□ 0.66
CHAF1A-201ENST00000301280 CCDC30Q5VVM6 783 aa19.15■□□□□ 0.66
CHAF1A-201ENST00000301280 ANKRD44Q8N8A2 993 aa19.15■□□□□ 0.66
CHAF1A-201ENST00000301280 DCTPP1Q9H773 170 aa19.15■□□□□ 0.66
CHAF1A-201ENST00000301280 XRCC6P12956 609 aaKnown RBP eCLIP19.14■□□□□ 0.653e-7■■■■□ 25.4
CHAF1A-201ENST00000301280 TTC22Q5TAA0 569 aa19.14■□□□□ 0.65
CHAF1A-201ENST00000301280 C9orf78Q9NZ63 289 aaPredicted RBP19.14■□□□□ 0.65
CHAF1A-201ENST00000301280 INTS3Q68E01 1043 aaKnown RBP19.13■□□□□ 0.65
CHAF1A-201ENST00000301280 PROSER2Q86WR7 435 aaPredicted RBP19.13■□□□□ 0.65
CHAF1A-201ENST00000301280 MED1Q15648 1581 aaPredicted RBP19.13■□□□□ 0.65
CHAF1A-201ENST00000301280 K7ELQ4 463 aaPredicted RBP19.13■□□□□ 0.65
CHAF1A-201ENST00000301280 CHMP3Q9Y3E7 222 aa19.13■□□□□ 0.65
CHAF1A-201ENST00000301280 PA2G4Q9UQ80 394 aaKnown RBP19.12■□□□□ 0.65
CHAF1A-201ENST00000301280 CEP170BQ9Y4F5 1589 aaPredicted RBP19.12■□□□□ 0.65
CHAF1A-201ENST00000301280 BTBD11A6QL63 1104 aa19.12■□□□□ 0.65
CHAF1A-201ENST00000301280 C1orf141Q5JVX7 400 aa19.12■□□□□ 0.65
CHAF1A-201ENST00000301280 RTL1A6NKG5 1358 aa19.12■□□□□ 0.65
CHAF1A-201ENST00000301280 KDM3BQ7LBC6 1761 aa19.12■□□□□ 0.65
CHAF1A-201ENST00000301280 SNX21Q969T3 373 aa19.12■□□□□ 0.65
CHAF1A-201ENST00000301280 TBX22Q9Y458 520 aa19.12■□□□□ 0.65
CHAF1A-201ENST00000301280 SBNO1A3KN83 1393 aa19.11■□□□□ 0.65
CHAF1A-201ENST00000301280 NBPF7P0C2Y1 421 aaPredicted RBP19.11■□□□□ 0.65
CHAF1A-201ENST00000301280 CWF19L2Q2TBE0 894 aaKnown RBP19.11■□□□□ 0.65
CHAF1A-201ENST00000301280 ANKLE2Q86XL3 938 aa19.11■□□□□ 0.65
CHAF1A-201ENST00000301280 GDPD2Q9HCC8 539 aa19.11■□□□□ 0.65
CHAF1A-201ENST00000301280 CAMTA1Q9Y6Y1 1673 aa19.11■□□□□ 0.65
CHAF1A-201ENST00000301280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.1■□□□□ 0.65
CHAF1A-201ENST00000301280 KCNJ4P48050 445 aa19.1■□□□□ 0.65
CHAF1A-201ENST00000301280 UNC5CLQ8IV45 518 aa19.1■□□□□ 0.65
CHAF1A-201ENST00000301280 RPAP2Q8IXW5 612 aaPredicted RBP19.1■□□□□ 0.65
CHAF1A-201ENST00000301280 LRRCC1Q9C099 1032 aa19.1■□□□□ 0.65
CHAF1A-201ENST00000301280 PPP1R42Q7Z4L9 355 aa19.1■□□□□ 0.65
CHAF1A-201ENST00000301280 GBP4Q96PP9 640 aa19.1■□□□□ 0.65
CHAF1A-201ENST00000301280 CPA1P15085 419 aa19.09■□□□□ 0.65
CHAF1A-201ENST00000301280 LMO7Q8WWI1 1683 aa19.09■□□□□ 0.65
CHAF1A-201ENST00000301280 CWC27Q6UX04 472 aaKnown RBP19.09■□□□□ 0.65
CHAF1A-201ENST00000301280 KLHDC4Q8TBB5 520 aa19.09■□□□□ 0.65
CHAF1A-201ENST00000301280 SPG7Q9UQ90 795 aa19.09■□□□□ 0.65
CHAF1A-201ENST00000301280 GOLGA6L22H0YM25 854 aa19.08■□□□□ 0.65
CHAF1A-201ENST00000301280 PRPF40AO75400 957 aaKnown RBP19.08■□□□□ 0.65
CHAF1A-201ENST00000301280 PDE1AP54750 535 aa19.08■□□□□ 0.65
CHAF1A-201ENST00000301280 PLCB2Q00722 1185 aa19.08■□□□□ 0.65
CHAF1A-201ENST00000301280 FSD2A1L4K1 749 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms