RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 BTBD11A6QL63 1104 aa31.76■■■□□ 2.67
GTF2A1-201ENST00000298173 FKBP8Q14318 412 aa31.76■■■□□ 2.67
GTF2A1-201ENST00000298173 KRT24Q2M2I5 525 aa31.76■■■□□ 2.67
GTF2A1-201ENST00000298173 ELL2O00472 640 aaPredicted RBP31.75■■■□□ 2.67
GTF2A1-201ENST00000298173 TNS2Q63HR2 1409 aa31.74■■■□□ 2.67
GTF2A1-201ENST00000298173 ALDH1L2Q3SY69 923 aa31.74■■■□□ 2.67
GTF2A1-201ENST00000298173 NFATC2IPQ8NCF5 419 aa31.74■■■□□ 2.67
GTF2A1-201ENST00000298173 SSH1Q8WYL5 1049 aa31.74■■■□□ 2.67
GTF2A1-201ENST00000298173 FBXO41Q8TF61 875 aa31.73■■■□□ 2.67
GTF2A1-201ENST00000298173 ERVV-2B6SEH9 535 aa31.73■■■□□ 2.67
GTF2A1-201ENST00000298173 PLIN1O60240 522 aa31.73■■■□□ 2.67
GTF2A1-201ENST00000298173 EIF4A1P60842 406 aaKnown RBP31.71■■■□□ 2.67
GTF2A1-201ENST00000298173 IRX6P78412 446 aaPredicted RBP31.71■■■□□ 2.67
GTF2A1-201ENST00000298173 KCNQ3O43525 872 aa31.7■■■□□ 2.67
GTF2A1-201ENST00000298173 BRPF1P55201 1214 aaPredicted RBP31.7■■■□□ 2.67
GTF2A1-201ENST00000298173 DDB1Q16531 1140 aa31.7■■■□□ 2.67
GTF2A1-201ENST00000298173 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.7■■■□□ 2.66
GTF2A1-201ENST00000298173 ATRNO75882 1429 aa31.69■■■□□ 2.66
GTF2A1-201ENST00000298173 BCL2L13Q9BXK5 485 aa31.69■■■□□ 2.66
GTF2A1-201ENST00000298173 SOS1Q07889 1333 aaPredicted RBP31.69■■■□□ 2.66
GTF2A1-201ENST00000298173 CABP4P57796 275 aa31.68■■■□□ 2.66
GTF2A1-201ENST00000298173 TOGARAM1Q9Y4F4 1720 aa31.68■■■□□ 2.66
GTF2A1-201ENST00000298173 FAM98CQ17RN3 349 aaKnown RBP31.67■■■□□ 2.66
GTF2A1-201ENST00000298173 HEG1Q9ULI3 1381 aa31.67■■■□□ 2.66
GTF2A1-201ENST00000298173 GJD4Q96KN9 370 aaPredicted RBP31.67■■■□□ 2.66
GTF2A1-201ENST00000298173 SMC4Q9NTJ3 1288 aa31.67■■■□□ 2.66
GTF2A1-201ENST00000298173 GLI3P10071 1580 aa31.66■■■□□ 2.66
GTF2A1-201ENST00000298173 TRPC5Q9UL62 973 aaPredicted RBP31.66■■■□□ 2.66
GTF2A1-201ENST00000298173 ZNF790Q6PG37 636 aa31.65■■■□□ 2.66
GTF2A1-201ENST00000298173 ERICH6BQ5W0A0 696 aa31.64■■■□□ 2.66
GTF2A1-201ENST00000298173 MRPL50Q8N5N7 158 aaKnown RBP31.64■■■□□ 2.65
GTF2A1-201ENST00000298173 ONECUT3O60422 494 aaPredicted RBP31.62■■■□□ 2.65
GTF2A1-201ENST00000298173 MARCH10Q8NA82 808 aaPredicted RBP31.62■■■□□ 2.65
GTF2A1-201ENST00000298173 THSD7AQ9UPZ6 1657 aa31.62■■■□□ 2.65
GTF2A1-201ENST00000298173 HOXB7P09629 217 aa31.61■■■□□ 2.65
GTF2A1-201ENST00000298173 SLC39A6Q13433 755 aa31.61■■■□□ 2.65
GTF2A1-201ENST00000298173 C20orf194Q5TEA3 1177 aa31.61■■■□□ 2.65
GTF2A1-201ENST00000298173 ITGB4P16144 1822 aa31.6■■■□□ 2.65
GTF2A1-201ENST00000298173 FRAT1Q92837 279 aaPredicted RBP31.59■■■□□ 2.65
GTF2A1-201ENST00000298173 QTRT2Q9H974 415 aaKnown RBP31.59■■■□□ 2.65
GTF2A1-201ENST00000298173 PDE3AQ14432 1141 aa31.58■■■□□ 2.65
GTF2A1-201ENST00000298173 GIGYF1O75420 1035 aaPredicted RBP31.57■■■□□ 2.65
GTF2A1-201ENST00000298173 NOB1Q9ULX3 412 aaKnown RBP31.57■■■□□ 2.65
GTF2A1-201ENST00000298173 KIF16BQ96L93 1317 aa31.57■■■□□ 2.64
GTF2A1-201ENST00000298173 TCERG1O14776 1098 aaKnown RBP31.57■■■□□ 2.64
GTF2A1-201ENST00000298173 PAPPAQ13219 1627 aa31.56■■■□□ 2.64
GTF2A1-201ENST00000298173 CACNA1FO60840 1977 aa31.56■■■□□ 2.64
GTF2A1-201ENST00000298173 ZKSCAN2Q63HK3 967 aa31.56■■■□□ 2.64
GTF2A1-201ENST00000298173 ARHGAP45Q92619 1136 aa31.54■■■□□ 2.64
GTF2A1-201ENST00000298173 ZNF496Q96IT1 587 aaPredicted RBP31.54■■■□□ 2.64
GTF2A1-201ENST00000298173 TMOD3Q9NYL9 352 aa31.54■■■□□ 2.64
GTF2A1-201ENST00000298173 UBR2Q8IWV8 1755 aa31.54■■■□□ 2.64
GTF2A1-201ENST00000298173 CCDC30Q5VVM6 783 aa31.54■■■□□ 2.64
GTF2A1-201ENST00000298173 PIGBQ92521 554 aa31.54■■■□□ 2.64
GTF2A1-201ENST00000298173 IPO8O15397 1037 aaKnown RBP31.53■■■□□ 2.64
GTF2A1-201ENST00000298173 CANXP27824 592 aaKnown RBP31.53■■■□□ 2.64
GTF2A1-201ENST00000298173 TTC5Q8N0Z6 440 aa31.53■■■□□ 2.64
GTF2A1-201ENST00000298173 KAT6BQ8WYB5 2073 aa31.52■■■□□ 2.64
GTF2A1-201ENST00000298173 ATF7IPQ6VMQ6 1270 aa31.52■■■□□ 2.64
GTF2A1-201ENST00000298173 BCL9O00512 1426 aa31.52■■■□□ 2.64
GTF2A1-201ENST00000298173 CHMP4AQ9BY43 222 aa31.51■■■□□ 2.64
GTF2A1-201ENST00000298173 TNNQ9UQP3 1299 aa31.51■■■□□ 2.64
GTF2A1-201ENST00000298173 DOT1LQ8TEK3 1739 aa31.51■■■□□ 2.64
GTF2A1-201ENST00000298173 TRIM27P14373 513 aa31.51■■■□□ 2.63
GTF2A1-201ENST00000298173 SLC4A2P04920 1241 aa31.5■■■□□ 2.63
GTF2A1-201ENST00000298173 EXOC6Q8TAG9 804 aa31.5■■■□□ 2.63
GTF2A1-201ENST00000298173 FMNL2Q96PY5 1086 aa31.5■■■□□ 2.63
GTF2A1-201ENST00000298173 CRBNQ96SW2 442 aa31.5■■■□□ 2.63
GTF2A1-201ENST00000298173 HDGFL1Q5TGJ6 251 aa31.49■■■□□ 2.63
GTF2A1-201ENST00000298173 ZNF772Q68DY9 489 aaPredicted RBP31.49■■■□□ 2.63
GTF2A1-201ENST00000298173 PRAMEF22A3QJZ6 481 aa31.48■■■□□ 2.63
GTF2A1-201ENST00000298173 RLBP1P12271 317 aa31.48■■■□□ 2.63
GTF2A1-201ENST00000298173 PRIM1P49642 420 aaKnown RBP31.48■■■□□ 2.63
GTF2A1-201ENST00000298173 KCPQ6ZWJ8 1503 aa31.48■■■□□ 2.63
GTF2A1-201ENST00000298173 PANK1Q8TE04 598 aa31.48■■■□□ 2.63
GTF2A1-201ENST00000298173 C5P01031 1676 aa31.47■■■□□ 2.63
GTF2A1-201ENST00000298173 MS4A1P11836 297 aa31.47■■■□□ 2.63
GTF2A1-201ENST00000298173 STK31Q9BXU1 1019 aa31.47■■■□□ 2.63
GTF2A1-201ENST00000298173 SNRPA1P09661 255 aaKnown RBP31.46■■■□□ 2.63
GTF2A1-201ENST00000298173 EIF2S2P20042 333 aaKnown RBP31.46■■■□□ 2.63
GTF2A1-201ENST00000298173 DZIP1LQ8IYY4 767 aaKnown RBP31.46■■■□□ 2.63
GTF2A1-201ENST00000298173 SEPT12Q8IYM1 358 aa31.45■■■□□ 2.63
GTF2A1-201ENST00000298173 NECTIN2Q92692 538 aa31.45■■■□□ 2.63
GTF2A1-201ENST00000298173 ATG3Q9NT62 314 aa31.45■■■□□ 2.63
GTF2A1-201ENST00000298173 A0A0G2JS52 829 aa31.44■■■□□ 2.62
GTF2A1-201ENST00000298173 MYT1Q01538 1121 aa31.44■■■□□ 2.62
GTF2A1-201ENST00000298173 ASAP1Q9ULH1 1129 aa31.44■■■□□ 2.62
GTF2A1-201ENST00000298173 CLUAP1Q96AJ1 413 aa31.44■■■□□ 2.62
GTF2A1-201ENST00000298173 G2E3Q7L622 706 aa31.43■■■□□ 2.62
GTF2A1-201ENST00000298173 PTPRCP08575 1304 aa31.42■■■□□ 2.62
GTF2A1-201ENST00000298173 PPP4R2Q9NY27 417 aa31.41■■■□□ 2.62
GTF2A1-201ENST00000298173 USP16Q9Y5T5 823 aa31.41■■■□□ 2.62
GTF2A1-201ENST00000298173 SYTL4Q96C24 671 aaPredicted RBP31.41■■■□□ 2.62
GTF2A1-201ENST00000298173 ACSBG1Q96GR2 724 aa31.41■■■□□ 2.62
GTF2A1-201ENST00000298173 API5Q9BZZ5 524 aaKnown RBP31.41■■■□□ 2.62
GTF2A1-201ENST00000298173 COG6Q9Y2V7 657 aa31.41■■■□□ 2.62
GTF2A1-201ENST00000298173 CHPF2Q9P2E5 772 aa31.4■■■□□ 2.62
GTF2A1-201ENST00000298173 RBM6P78332 1123 aaKnown RBP31.39■■■□□ 2.62
GTF2A1-201ENST00000298173 FTSJ3Q8IY81 847 aaKnown RBP31.39■■■□□ 2.62
GTF2A1-201ENST00000298173 DBF4Q9UBU7 674 aaPredicted RBP31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms