RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 BTBD11A6QL63 1104 aa17.42■□□□□ 0.38
NXF1-201ENST00000294172 KCNQ3O43525 872 aa17.42■□□□□ 0.38
NXF1-201ENST00000294172 SMARCA5O60264 1052 aaPredicted RBP17.42■□□□□ 0.38
NXF1-201ENST00000294172 GNAI2P04899 355 aa17.42■□□□□ 0.38
NXF1-201ENST00000294172 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
NXF1-201ENST00000294172 NFKBIBQ15653 356 aa17.42■□□□□ 0.38
NXF1-201ENST00000294172 TBC1D2Q9BYX2 928 aa17.42■□□□□ 0.38
NXF1-201ENST00000294172 HMMRO75330 724 aa17.42■□□□□ 0.38
NXF1-201ENST00000294172 SLKQ9H2G2 1235 aaPredicted RBP17.42■□□□□ 0.38
NXF1-201ENST00000294172 PHAXQ9H814 394 aaKnown RBP17.42■□□□□ 0.38
NXF1-201ENST00000294172 PHRF1Q9P1Y6 1649 aaKnown RBP17.41■□□□□ 0.38
NXF1-201ENST00000294172 TRPM3Q9HCF6 1732 aaPredicted RBP17.41■□□□□ 0.38
NXF1-201ENST00000294172 OTUD7AQ8TE49 926 aaPredicted RBP17.41■□□□□ 0.38
NXF1-201ENST00000294172 TBC1D9Q6ZT07 1266 aa17.4■□□□□ 0.38
NXF1-201ENST00000294172 MST1RQ04912 1400 aa17.4■□□□□ 0.38
NXF1-201ENST00000294172 KIF1AQ12756 1690 aa17.4■□□□□ 0.38
NXF1-201ENST00000294172 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.38
NXF1-201ENST00000294172 GSPT1P15170 499 aaKnown RBP17.39■□□□□ 0.38
NXF1-201ENST00000294172 FAM208AQ9UK61 1670 aaKnown RBP17.39■□□□□ 0.37
NXF1-201ENST00000294172 CABLES1Q8TDN4 633 aa17.39■□□□□ 0.37
NXF1-201ENST00000294172 PXDNQ92626 1479 aa17.39■□□□□ 0.37
NXF1-201ENST00000294172 GNAI3P08754 354 aa17.38■□□□□ 0.37
NXF1-201ENST00000294172 CHPF2Q9P2E5 772 aa17.38■□□□□ 0.37
NXF1-201ENST00000294172 CADPS2Q86UW7 1296 aa17.38■□□□□ 0.37
NXF1-201ENST00000294172 SPRYD3Q8NCJ5 442 aa17.38■□□□□ 0.37
NXF1-201ENST00000294172 NLRP2Q9NX02 1062 aa17.38■□□□□ 0.37
NXF1-201ENST00000294172 ERBB3P21860 1342 aa17.38■□□□□ 0.37
NXF1-201ENST00000294172 TTC22Q5TAA0 569 aa17.37■□□□□ 0.37
NXF1-201ENST00000294172 CDC45O75419 566 aa17.37■□□□□ 0.37
NXF1-201ENST00000294172 EXOC6BQ9Y2D4 811 aa17.37■□□□□ 0.37
NXF1-201ENST00000294172 ANXA1P04083 346 aa17.36■□□□□ 0.37
NXF1-201ENST00000294172 RBM25P49756 843 aaKnown RBP17.36■□□□□ 0.37
NXF1-201ENST00000294172 LRRFIP2Q9Y608 721 aaKnown RBP17.36■□□□□ 0.37
NXF1-201ENST00000294172 NCAPD2Q15021 1401 aa17.35■□□□□ 0.37
NXF1-201ENST00000294172 MED1Q15648 1581 aaPredicted RBP17.35■□□□□ 0.37
NXF1-201ENST00000294172 STRCP1A6NGW2 1772 aa17.35■□□□□ 0.37
NXF1-201ENST00000294172 HOXB7P09629 217 aa17.35■□□□□ 0.37
NXF1-201ENST00000294172 CSB-PGBD3P0DP91 1061 aa17.35■□□□□ 0.37
NXF1-201ENST00000294172 RAPGEF4Q8WZA2 1011 aa17.35■□□□□ 0.37
NXF1-201ENST00000294172 NPHP3Q7Z494 1330 aa17.35■□□□□ 0.37
NXF1-201ENST00000294172 PNMA6EA0A0J9YXQ4 647 aa17.35■□□□□ 0.37
NXF1-201ENST00000294172 FRAT2O75474 233 aaPredicted RBP17.35■□□□□ 0.37
NXF1-201ENST00000294172 USP44Q9H0E7 712 aa17.35■□□□□ 0.37
NXF1-201ENST00000294172 LMO7Q8WWI1 1683 aa17.34■□□□□ 0.37
NXF1-201ENST00000294172 UBTFL1P0CB47 393 aaPredicted RBP17.34■□□□□ 0.37
NXF1-201ENST00000294172 CHRNA2Q15822 529 aa17.34■□□□□ 0.37
NXF1-201ENST00000294172 CACNA1FO60840 1977 aa17.34■□□□□ 0.37
NXF1-201ENST00000294172 DCCP43146 1447 aa17.34■□□□□ 0.37
NXF1-201ENST00000294172 CHMP4AQ9BY43 222 aa17.33■□□□□ 0.37
NXF1-201ENST00000294172 PI4KAP2A4QPH2 592 aa17.33■□□□□ 0.36
NXF1-201ENST00000294172 ATP8B2P98198 1209 aa17.33■□□□□ 0.36
NXF1-201ENST00000294172 PI4KAP1Q8N8J0 262 aa17.33■□□□□ 0.36
NXF1-201ENST00000294172 SRCIN1Q9C0H9 1055 aa17.33■□□□□ 0.36
NXF1-201ENST00000294172 RGPD5Q99666 1765 aa17.33■□□□□ 0.36
NXF1-201ENST00000294172 ALS2Q96Q42 1657 aa17.33■□□□□ 0.36
NXF1-201ENST00000294172 HSCBQ8IWL3 235 aa17.32■□□□□ 0.36
NXF1-201ENST00000294172 SDSP20132 328 aa17.31■□□□□ 0.36
NXF1-201ENST00000294172 ANTXR1Q9H6X2 564 aa17.31■□□□□ 0.36
NXF1-201ENST00000294172 KDM3BQ7LBC6 1761 aa17.31■□□□□ 0.36
NXF1-201ENST00000294172 NCOA3Q9Y6Q9 1424 aa17.31■□□□□ 0.36
NXF1-201ENST00000294172 PRAMEF22A3QJZ6 481 aa17.31■□□□□ 0.36
NXF1-201ENST00000294172 GIGYF1O75420 1035 aaPredicted RBP17.31■□□□□ 0.36
NXF1-201ENST00000294172 DNAAF4Q8WXU2 420 aa17.31■□□□□ 0.36
NXF1-201ENST00000294172 DBF4Q9UBU7 674 aaPredicted RBP17.31■□□□□ 0.36
NXF1-201ENST00000294172 PXDNLA1KZ92 1463 aa17.3■□□□□ 0.36
NXF1-201ENST00000294172 TATP17735 454 aaPredicted RBP17.3■□□□□ 0.36
NXF1-201ENST00000294172 LRRCC1Q9C099 1032 aa17.3■□□□□ 0.36
NXF1-201ENST00000294172 TNS3Q68CZ2 1445 aa17.29■□□□□ 0.36
NXF1-201ENST00000294172 PDE1AP54750 535 aa17.29■□□□□ 0.36
NXF1-201ENST00000294172 PROSER3Q2NL68 480 aa17.29■□□□□ 0.36
NXF1-201ENST00000294172 TSHZ3Q63HK5 1081 aa17.29■□□□□ 0.36
NXF1-201ENST00000294172 SPATA31A3Q5VYP0 1347 aa17.28■□□□□ 0.36
NXF1-201ENST00000294172 OVOS2A0A0G2JMS6 1433 aa17.28■□□□□ 0.36
NXF1-201ENST00000294172 NBPF7P0C2Y1 421 aaPredicted RBP17.28■□□□□ 0.36
NXF1-201ENST00000294172 BEND3Q5T5X7 828 aa17.28■□□□□ 0.36
NXF1-201ENST00000294172 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
NXF1-201ENST00000294172 CAMTA1Q9Y6Y1 1673 aa17.28■□□□□ 0.36
NXF1-201ENST00000294172 SLC39A6Q13433 755 aa17.27■□□□□ 0.36
NXF1-201ENST00000294172 CASC1Q6TDU7 716 aa17.27■□□□□ 0.36
NXF1-201ENST00000294172 KIF2CQ99661 725 aa17.27■□□□□ 0.36
NXF1-201ENST00000294172 PPP1R42Q7Z4L9 355 aa17.27■□□□□ 0.35
NXF1-201ENST00000294172 IBTKQ9P2D0 1353 aaPredicted RBP17.26■□□□□ 0.35
NXF1-201ENST00000294172 PHKG2P15735 406 aa17.26■□□□□ 0.35
NXF1-201ENST00000294172 ADCY9O60503 1353 aa17.26■□□□□ 0.35
NXF1-201ENST00000294172 BRINP3Q76B58 766 aa17.26■□□□□ 0.35
NXF1-201ENST00000294172 NFATC2IPQ8NCF5 419 aa17.26■□□□□ 0.35
NXF1-201ENST00000294172 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
NXF1-201ENST00000294172 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
NXF1-201ENST00000294172 OSBPL3Q9H4L5 887 aa17.25■□□□□ 0.35
NXF1-201ENST00000294172 SLC52A2Q9HAB3 445 aa17.25■□□□□ 0.35
NXF1-201ENST00000294172 MEGF6O75095 1541 aa17.25■□□□□ 0.35
NXF1-201ENST00000294172 SRGAP3O43295 1099 aa17.25■□□□□ 0.35
NXF1-201ENST00000294172 EIF5BO60841 1220 aaKnown RBP17.25■□□□□ 0.35
NXF1-201ENST00000294172 ZNF790Q6PG37 636 aa17.25■□□□□ 0.35
NXF1-201ENST00000294172 SSH3Q8TE77 659 aa17.25■□□□□ 0.35
NXF1-201ENST00000294172 SNX21Q969T3 373 aa17.25■□□□□ 0.35
NXF1-201ENST00000294172 HEG1Q9ULI3 1381 aa17.24■□□□□ 0.35
NXF1-201ENST00000294172 SURF6O75683 361 aaKnown RBP17.24■□□□□ 0.35
NXF1-201ENST00000294172 MX1P20591 662 aa17.24■□□□□ 0.35
NXF1-201ENST00000294172 AIMP1Q12904 312 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms