RNA–Protein interactions for RNA: ENST00000285106.10

CXXC1-201, Transcript of CXXC finger protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXXC1, Length 2,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-201ENST00000285106 RBSNQ9H1K0 784 aa20.49■□□□□ 0.87
CXXC1-201ENST00000285106 ATP10DQ9P241 1426 aa20.49■□□□□ 0.87
CXXC1-201ENST00000285106 TTC22Q5TAA0 569 aa20.49■□□□□ 0.87
CXXC1-201ENST00000285106 G2E3Q7L622 706 aa20.49■□□□□ 0.87
CXXC1-201ENST00000285106 OTUD7AQ8TE49 926 aaPredicted RBP20.49■□□□□ 0.87
CXXC1-201ENST00000285106 F6X3S4 739 aa20.48■□□□□ 0.87
CXXC1-201ENST00000285106 SMARCA5O60264 1052 aaPredicted RBP20.48■□□□□ 0.87
CXXC1-201ENST00000285106 THEMISQ8N1K5 641 aaPredicted RBP20.48■□□□□ 0.87
CXXC1-201ENST00000285106 NALCNQ8IZF0 1738 aa20.47■□□□□ 0.87
CXXC1-201ENST00000285106 PRIM1P49642 420 aaKnown RBP20.47■□□□□ 0.87
CXXC1-201ENST00000285106 PDLIM2Q96JY6 352 aa20.47■□□□□ 0.87
CXXC1-201ENST00000285106 USP26Q9BXU7 913 aa20.47■□□□□ 0.87
CXXC1-201ENST00000285106 RGPD1P0DJD0 1748 aa20.47■□□□□ 0.87
CXXC1-201ENST00000285106 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.46■□□□□ 0.87
CXXC1-201ENST00000285106 HS1BP3Q53T59 392 aa20.46■□□□□ 0.87
CXXC1-201ENST00000285106 NOL7Q9UMY1 257 aaKnown RBP20.46■□□□□ 0.87
CXXC1-201ENST00000285106 IGSF1Q8N6C5 1336 aa20.46■□□□□ 0.87
CXXC1-201ENST00000285106 KDRP35968 1356 aa20.46■□□□□ 0.87
CXXC1-201ENST00000285106 ZGPATQ8N5A5 531 aaKnown RBP20.45■□□□□ 0.86
CXXC1-201ENST00000285106 RBM10P98175 930 aaKnown RBP20.44■□□□□ 0.86
CXXC1-201ENST00000285106 GPT2Q8TD30 523 aa20.44■□□□□ 0.86
CXXC1-201ENST00000285106 RBM27Q9P2N5 1060 aaKnown RBP20.44■□□□□ 0.86
CXXC1-201ENST00000285106 R3HCC1Q9Y3T6 440 aaKnown RBP20.44■□□□□ 0.86
CXXC1-201ENST00000285106 TERF1P54274 439 aa20.44■□□□□ 0.86
CXXC1-201ENST00000285106 STK31Q9BXU1 1019 aa20.44■□□□□ 0.86
CXXC1-201ENST00000285106 PRPF40AO75400 957 aaKnown RBP20.43■□□□□ 0.86
CXXC1-201ENST00000285106 LTV1Q96GA3 475 aaPredicted RBP20.43■□□□□ 0.86
CXXC1-201ENST00000285106 HMMRO75330 724 aa20.43■□□□□ 0.86
CXXC1-201ENST00000285106 KCNA6P17658 529 aa20.43■□□□□ 0.86
CXXC1-201ENST00000285106 CCT4P50991 539 aaKnown RBP20.43■□□□□ 0.86
CXXC1-201ENST00000285106 XPCQ01831 940 aaPredicted RBP20.43■□□□□ 0.86
CXXC1-201ENST00000285106 ARHGAP23Q9P227 1491 aa20.43■□□□□ 0.86
CXXC1-201ENST00000285106 DIP2AQ14689 1571 aa20.42■□□□□ 0.86
CXXC1-201ENST00000285106 CEP170BQ9Y4F5 1589 aaPredicted RBP20.42■□□□□ 0.86
CXXC1-201ENST00000285106 SLIT1O75093 1534 aa20.42■□□□□ 0.86
CXXC1-201ENST00000285106 ZNF500O60304 480 aaPredicted RBP20.42■□□□□ 0.86
CXXC1-201ENST00000285106 NECTIN2Q92692 538 aa20.42■□□□□ 0.86
CXXC1-201ENST00000285106 CHAMP1Q96JM3 812 aa20.42■□□□□ 0.86
CXXC1-201ENST00000285106 ZDHHC9Q9Y397 364 aa20.42■□□□□ 0.86
CXXC1-201ENST00000285106 SDSP20132 328 aa20.42■□□□□ 0.86
CXXC1-201ENST00000285106 ABTB2Q8N961 1025 aa20.41■□□□□ 0.86
CXXC1-201ENST00000285106 RIMS1Q86UR5 1692 aaKnown RBP20.41■□□□□ 0.86
CXXC1-201ENST00000285106 GNAT3A8MTJ3 354 aa20.41■□□□□ 0.86
CXXC1-201ENST00000285106 HOXC9P31274 260 aa20.41■□□□□ 0.86
CXXC1-201ENST00000285106 C14orf37Q86TY3 774 aa20.41■□□□□ 0.86
CXXC1-201ENST00000285106 CWC22Q9HCG8 908 aaKnown RBP20.4■□□□□ 0.86
CXXC1-201ENST00000285106 RGPD8O14715 1765 aaPredicted RBP20.4■□□□□ 0.86
CXXC1-201ENST00000285106 CASC1Q6TDU7 716 aa20.4■□□□□ 0.86
CXXC1-201ENST00000285106 FKBP5Q13451 457 aaPredicted RBP20.39■□□□□ 0.85
CXXC1-201ENST00000285106 TMEM63CQ9P1W3 806 aa20.39■□□□□ 0.85
CXXC1-201ENST00000285106 HTATSF1O43719 755 aaKnown RBP20.39■□□□□ 0.85
CXXC1-201ENST00000285106 FAM13BQ9NYF5 915 aa20.39■□□□□ 0.85
CXXC1-201ENST00000285106 ST18O60284 1047 aa20.38■□□□□ 0.85
CXXC1-201ENST00000285106 GNAI2P04899 355 aa20.38■□□□□ 0.85
CXXC1-201ENST00000285106 CCDC30Q5VVM6 783 aa20.38■□□□□ 0.85
CXXC1-201ENST00000285106 FLIIQ13045 1269 aa20.38■□□□□ 0.85
CXXC1-201ENST00000285106 NSFL1CQ9UNZ2 370 aaKnown RBP20.38■□□□□ 0.85
CXXC1-201ENST00000285106 ZKSCAN5Q9Y2L8 839 aa20.38■□□□□ 0.85
CXXC1-201ENST00000285106 SYCE3A1L190 88 aa20.37■□□□□ 0.85
CXXC1-201ENST00000285106 FMN2Q9NZ56 1722 aa20.37■□□□□ 0.85
CXXC1-201ENST00000285106 EXOC6BQ9Y2D4 811 aa20.37■□□□□ 0.85
CXXC1-201ENST00000285106 IL17REQ8NFR9 667 aa20.36■□□□□ 0.85
CXXC1-201ENST00000285106 PIK3C2AO00443 1686 aa20.36■□□□□ 0.85
CXXC1-201ENST00000285106 UQCRHLA0A096LP55 91 aa20.36■□□□□ 0.85
CXXC1-201ENST00000285106 UQCRHP07919 91 aa20.36■□□□□ 0.85
CXXC1-201ENST00000285106 LRSAM1Q6UWE0 723 aa20.36■□□□□ 0.85
CXXC1-201ENST00000285106 USHBP1Q8N6Y0 703 aa20.35■□□□□ 0.85
CXXC1-201ENST00000285106 TAF7Q15545 349 aaPredicted RBP20.34■□□□□ 0.85
CXXC1-201ENST00000285106 ANKARQ7Z5J8 1434 aa20.34■□□□□ 0.85
CXXC1-201ENST00000285106 PDE1AP54750 535 aa20.33■□□□□ 0.85
CXXC1-201ENST00000285106 FOXD4L5Q5VV16 416 aaPredicted RBP20.33■□□□□ 0.85
CXXC1-201ENST00000285106 FOXD4L4Q8WXT5 416 aaPredicted RBP20.33■□□□□ 0.85
CXXC1-201ENST00000285106 GNAI3P08754 354 aa20.33■□□□□ 0.85
CXXC1-201ENST00000285106 MAP3K5Q99683 1374 aa20.33■□□□□ 0.84
CXXC1-201ENST00000285106 REC8O95072 547 aa20.32■□□□□ 0.84
CXXC1-201ENST00000285106 RNF214Q8ND24 703 aa20.32■□□□□ 0.84
CXXC1-201ENST00000285106 RBM33Q96EV2 1170 aaKnown RBP20.32■□□□□ 0.84
CXXC1-201ENST00000285106 TSHZ3Q63HK5 1081 aa20.31■□□□□ 0.84
CXXC1-201ENST00000285106 PNMA6EA0A0J9YXQ4 647 aa20.3■□□□□ 0.84
CXXC1-201ENST00000285106 PHF8Q9UPP1 1060 aa20.3■□□□□ 0.84
CXXC1-201ENST00000285106 ERC2O15083 957 aa20.3■□□□□ 0.84
CXXC1-201ENST00000285106 MCM5P33992 734 aa20.3■□□□□ 0.84
CXXC1-201ENST00000285106 MAP7D2Q96T17 732 aa20.3■□□□□ 0.84
CXXC1-201ENST00000285106 LRRCC1Q9C099 1032 aa20.3■□□□□ 0.84
CXXC1-201ENST00000285106 OSBPL3Q9H4L5 887 aa20.3■□□□□ 0.84
CXXC1-201ENST00000285106 ZBTB7CA1YPR0 619 aa20.29■□□□□ 0.84
CXXC1-201ENST00000285106 CCDC39Q9UFE4 941 aa20.29■□□□□ 0.84
CXXC1-201ENST00000285106 CSPP1Q1MSJ5 1256 aa20.29■□□□□ 0.84
CXXC1-201ENST00000285106 HDGFL1Q5TGJ6 251 aa20.29■□□□□ 0.84
CXXC1-201ENST00000285106 LRRFIP2Q9Y608 721 aaKnown RBP20.29■□□□□ 0.84
CXXC1-201ENST00000285106 ATP8B2P98198 1209 aa20.28■□□□□ 0.84
CXXC1-201ENST00000285106 XRN1Q8IZH2 1706 aaKnown RBP20.28■□□□□ 0.84
CXXC1-201ENST00000285106 TMX3Q96JJ7 454 aa20.27■□□□□ 0.84
CXXC1-201ENST00000285106 FER1L4A9Z1Z3 1794 aa20.27■□□□□ 0.84
CXXC1-201ENST00000285106 MBD3O95983 291 aa20.27■□□□□ 0.84
CXXC1-201ENST00000285106 BABAM1Q9NWV8 329 aa20.26■□□□□ 0.83
CXXC1-201ENST00000285106 NWD1Q149M9 1564 aa20.26■□□□□ 0.83
CXXC1-201ENST00000285106 NEK4P51957 841 aa20.26■□□□□ 0.83
CXXC1-201ENST00000285106 DYNC1I1O14576 645 aa20.26■□□□□ 0.83
CXXC1-201ENST00000285106 EIF2S2P20042 333 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms