RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 IL1RAPL2Q9NP60 686 aa20.62■□□□□ 0.89
RTN1-201ENST00000267484 MX1P20591 662 aa20.62■□□□□ 0.89
RTN1-201ENST00000267484 LRRCC1Q9C099 1032 aa20.62■□□□□ 0.89
RTN1-201ENST00000267484 OSBPL3Q9H4L5 887 aa20.62■□□□□ 0.89
RTN1-201ENST00000267484 CCT4P50991 539 aaKnown RBP20.61■□□□□ 0.89
RTN1-201ENST00000267484 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.61■□□□□ 0.89
RTN1-201ENST00000267484 RRP9O43818 475 aaKnown RBP20.61■□□□□ 0.89
RTN1-201ENST00000267484 DTNBO60941 627 aa20.61■□□□□ 0.89
RTN1-201ENST00000267484 TSPOAP1O95153 1857 aa20.61■□□□□ 0.89
RTN1-201ENST00000267484 ZBTB7CA1YPR0 619 aa20.6■□□□□ 0.89
RTN1-201ENST00000267484 PEAK1Q9H792 1746 aa20.6■□□□□ 0.89
RTN1-201ENST00000267484 FLIIQ13045 1269 aa20.6■□□□□ 0.89
RTN1-201ENST00000267484 STK31Q9BXU1 1019 aa20.6■□□□□ 0.89
RTN1-201ENST00000267484 LRRFIP2Q9Y608 721 aaKnown RBP20.6■□□□□ 0.89
RTN1-201ENST00000267484 CHMLP26374 656 aa20.59■□□□□ 0.89
RTN1-201ENST00000267484 MPNDQ8N594 471 aa20.59■□□□□ 0.89
RTN1-201ENST00000267484 R3HCC1Q9Y3T6 440 aaKnown RBP20.59■□□□□ 0.89
RTN1-201ENST00000267484 VSIG10Q8N0Z9 540 aa20.59■□□□□ 0.89
RTN1-201ENST00000267484 LARP6Q9BRS8 491 aaKnown RBP20.59■□□□□ 0.89
RTN1-201ENST00000267484 RBM10P98175 930 aaKnown RBP20.59■□□□□ 0.89
RTN1-201ENST00000267484 NUTM2GQ5VZR2 741 aa20.59■□□□□ 0.89
RTN1-201ENST00000267484 LRSAM1Q6UWE0 723 aa20.59■□□□□ 0.89
RTN1-201ENST00000267484 ESF1Q9H501 851 aaKnown RBP20.59■□□□□ 0.89
RTN1-201ENST00000267484 SPATA31D1Q6ZQQ2 1576 aa20.59■□□□□ 0.89
RTN1-201ENST00000267484 SALL3Q9BXA9 1300 aa20.58■□□□□ 0.89
RTN1-201ENST00000267484 OFD1O75665 1012 aa20.58■□□□□ 0.89
RTN1-201ENST00000267484 EYA1Q99502 592 aa20.58■□□□□ 0.89
RTN1-201ENST00000267484 ITSN1Q15811 1721 aa20.58■□□□□ 0.89
RTN1-201ENST00000267484 NUTM1Q86Y26 1132 aa20.58■□□□□ 0.88
RTN1-201ENST00000267484 SLC26A8Q96RN1 970 aa20.58■□□□□ 0.88
RTN1-201ENST00000267484 OVOS2A0A0J9YW53 1432 aa20.58■□□□□ 0.88
RTN1-201ENST00000267484 OVOS2Q6IE36 1432 aa20.58■□□□□ 0.88
RTN1-201ENST00000267484 NRKQ7Z2Y5 1582 aa20.57■□□□□ 0.88
RTN1-201ENST00000267484 PDLIM2Q96JY6 352 aa20.57■□□□□ 0.88
RTN1-201ENST00000267484 AKAP12Q02952 1782 aa20.57■□□□□ 0.88
RTN1-201ENST00000267484 BRD1O95696 1058 aa20.57■□□□□ 0.88
RTN1-201ENST00000267484 GADD45BO75293 160 aaPredicted RBP20.56■□□□□ 0.88
RTN1-201ENST00000267484 AMPHP49418 695 aa20.56■□□□□ 0.88
RTN1-201ENST00000267484 TPM2P07951 284 aa20.55■□□□□ 0.88
RTN1-201ENST00000267484 LTV1Q96GA3 475 aaPredicted RBP20.55■□□□□ 0.88
RTN1-201ENST00000267484 NOL7Q9UMY1 257 aaKnown RBP20.55■□□□□ 0.88
RTN1-201ENST00000267484 PLPPR3Q6T4P5 718 aa20.55■□□□□ 0.88
RTN1-201ENST00000267484 USP6P35125 1406 aa20.55■□□□□ 0.88
RTN1-201ENST00000267484 ATP8B2P98198 1209 aa20.55■□□□□ 0.88
RTN1-201ENST00000267484 MCCP23508 829 aa20.54■□□□□ 0.88
RTN1-201ENST00000267484 CUL4AQ13619 759 aa20.53■□□□□ 0.88
RTN1-201ENST00000267484 PHAXQ9H814 394 aaKnown RBP20.52■□□□□ 0.88
RTN1-201ENST00000267484 PLEKHG3A1L390 1219 aa20.52■□□□□ 0.88
RTN1-201ENST00000267484 GNAI3P08754 354 aa20.52■□□□□ 0.88
RTN1-201ENST00000267484 LTKP29376 864 aa20.52■□□□□ 0.88
RTN1-201ENST00000267484 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.52■□□□□ 0.88
RTN1-201ENST00000267484 CEP170BQ9Y4F5 1589 aaPredicted RBP20.52■□□□□ 0.87
RTN1-201ENST00000267484 GLIPR1L2Q4G1C9 344 aa20.52■□□□□ 0.87
RTN1-201ENST00000267484 USP44Q9H0E7 712 aa20.52■□□□□ 0.87
RTN1-201ENST00000267484 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.87
RTN1-201ENST00000267484 TECPR2O15040 1411 aa20.51■□□□□ 0.87
RTN1-201ENST00000267484 CCDC30Q5VVM6 783 aa20.51■□□□□ 0.87
RTN1-201ENST00000267484 SIRT1Q96EB6 747 aa20.51■□□□□ 0.87
RTN1-201ENST00000267484 NGDNQ8NEJ9 315 aaKnown RBP20.5■□□□□ 0.87
RTN1-201ENST00000267484 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.5■□□□□ 0.87
RTN1-201ENST00000267484 USHBP1Q8N6Y0 703 aa20.5■□□□□ 0.87
RTN1-201ENST00000267484 ZKSCAN5Q9Y2L8 839 aa20.5■□□□□ 0.87
RTN1-201ENST00000267484 ARHGEF10O15013 1369 aa20.49■□□□□ 0.87
RTN1-201ENST00000267484 MBD3O95983 291 aa20.49■□□□□ 0.87
RTN1-201ENST00000267484 USP48Q86UV5 1035 aa20.49■□□□□ 0.87
RTN1-201ENST00000267484 SURF6O75683 361 aaKnown RBP20.49■□□□□ 0.87
RTN1-201ENST00000267484 IL17REQ8NFR9 667 aa20.49■□□□□ 0.87
RTN1-201ENST00000267484 ARID3AQ99856 593 aa20.49■□□□□ 0.87
RTN1-201ENST00000267484 UBTFL1P0CB47 393 aaPredicted RBP20.49■□□□□ 0.87
RTN1-201ENST00000267484 MCM2P49736 904 aa20.49■□□□□ 0.87
RTN1-201ENST00000267484 HDGFP51858 240 aaKnown RBP20.49■□□□□ 0.87
RTN1-201ENST00000267484 FAM13BQ9NYF5 915 aa20.49■□□□□ 0.87
RTN1-201ENST00000267484 USP31Q70CQ4 1352 aa20.48■□□□□ 0.87
RTN1-201ENST00000267484 CPA1P15085 419 aa20.48■□□□□ 0.87
RTN1-201ENST00000267484 EIF2S2P20042 333 aaKnown RBP20.48■□□□□ 0.87
RTN1-201ENST00000267484 TSPY26PQ9H489 355 aa20.48■□□□□ 0.87
RTN1-201ENST00000267484 RGPD1P0DJD0 1748 aa20.48■□□□□ 0.87
RTN1-201ENST00000267484 HS1BP3Q53T59 392 aa20.47■□□□□ 0.87
RTN1-201ENST00000267484 ZNF500O60304 480 aaPredicted RBP20.47■□□□□ 0.87
RTN1-201ENST00000267484 PPP1R42Q7Z4L9 355 aa20.47■□□□□ 0.87
RTN1-201ENST00000267484 FLT4P35916 1363 aa20.47■□□□□ 0.87
RTN1-201ENST00000267484 GNAT3A8MTJ3 354 aa20.47■□□□□ 0.87
RTN1-201ENST00000267484 PTMAP06454 111 aaKnown RBP20.47■□□□□ 0.87
RTN1-201ENST00000267484 STAP2Q9UGK3 403 aa20.47■□□□□ 0.87
RTN1-201ENST00000267484 ADAMTS13Q76LX8 1427 aa20.46■□□□□ 0.87
RTN1-201ENST00000267484 TMEM2Q9UHN6 1383 aa20.46■□□□□ 0.87
RTN1-201ENST00000267484 NLRP6P59044 892 aa20.46■□□□□ 0.87
RTN1-201ENST00000267484 IGSF1Q8N6C5 1336 aa20.46■□□□□ 0.87
RTN1-201ENST00000267484 AGLP35573 1532 aa20.46■□□□□ 0.87
RTN1-201ENST00000267484 ANAPC15P60006 121 aa20.46■□□□□ 0.87
RTN1-201ENST00000267484 INTS4Q96HW7 963 aaKnown RBP20.46■□□□□ 0.87
RTN1-201ENST00000267484 ZNF830Q96NB3 372 aaPredicted RBP20.46■□□□□ 0.87
RTN1-201ENST00000267484 CNPY2Q9Y2B0 182 aa20.46■□□□□ 0.87
RTN1-201ENST00000267484 ANXA1P04083 346 aa20.45■□□□□ 0.86
RTN1-201ENST00000267484 RASEFQ8IZ41 740 aa20.45■□□□□ 0.86
RTN1-201ENST00000267484 SRCIN1Q9C0H9 1055 aa20.45■□□□□ 0.86
RTN1-201ENST00000267484 ZMYND15Q9H091 742 aa20.45■□□□□ 0.86
RTN1-201ENST00000267484 SPG7Q9UQ90 795 aa20.45■□□□□ 0.86
RTN1-201ENST00000267484 SBNO1A3KN83 1393 aa20.45■□□□□ 0.86
RTN1-201ENST00000267484 HDGFL1Q5TGJ6 251 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms