RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 A0A1W2PRG0 241 aa12.94□□□□□ -0.34
CHFR-201ENST00000266880 SMAP1Q8IYB5 467 aaPredicted RBP12.94□□□□□ -0.34
CHFR-201ENST00000266880 SWAP70Q9UH65 585 aa12.94□□□□□ -0.34
CHFR-201ENST00000266880 CCDC57Q2TAC2 916 aa12.94□□□□□ -0.34
CHFR-201ENST00000266880 UBA5Q9GZZ9 404 aa12.94□□□□□ -0.34
CHFR-201ENST00000266880 CUX2O14529 1486 aa12.94□□□□□ -0.34
CHFR-201ENST00000266880 CACNA2D4Q7Z3S7 1137 aa12.94□□□□□ -0.34
CHFR-201ENST00000266880 VPS36Q86VN1 386 aa12.94□□□□□ -0.34
CHFR-201ENST00000266880 NSRP1Q9H0G5 558 aaKnown RBP12.94□□□□□ -0.34
CHFR-201ENST00000266880 CNTLNQ9NXG0 1405 aa12.94□□□□□ -0.34
CHFR-201ENST00000266880 FERMT3Q86UX7 667 aa12.94□□□□□ -0.34
CHFR-201ENST00000266880 CCDC83Q8IWF9 413 aa12.93□□□□□ -0.34
CHFR-201ENST00000266880 CDCA7LQ96GN5 454 aa12.93□□□□□ -0.34
CHFR-201ENST00000266880 RPUSD2Q8IZ73 545 aaKnown RBP12.93□□□□□ -0.34
CHFR-201ENST00000266880 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHFR-201ENST00000266880 ABCC8Q09428 1581 aa12.93□□□□□ -0.34
CHFR-201ENST00000266880 CKAP2LQ8IYA6 745 aa12.93□□□□□ -0.34
CHFR-201ENST00000266880 MYCBPQ99417 103 aaPredicted RBP12.93□□□□□ -0.34
CHFR-201ENST00000266880 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
CHFR-201ENST00000266880 BLOC1S2Q6QNY1 142 aa12.93□□□□□ -0.34
CHFR-201ENST00000266880 PPP6R1Q9UPN7 881 aa12.93□□□□□ -0.34
CHFR-201ENST00000266880 GNAI2P04899 355 aa12.93□□□□□ -0.34
CHFR-201ENST00000266880 FAM114A1Q8IWE2 563 aa12.93□□□□□ -0.34
CHFR-201ENST00000266880 CCDC18Q5T9S5 1454 aa12.92□□□□□ -0.34
CHFR-201ENST00000266880 MCM6Q14566 821 aa12.92□□□□□ -0.34
CHFR-201ENST00000266880 BAZ1AQ9NRL2 1556 aaPredicted RBP12.92□□□□□ -0.34
CHFR-201ENST00000266880 SPINK5Q9NQ38 1064 aaPredicted RBP12.92□□□□□ -0.34
CHFR-201ENST00000266880 CTNNA2P26232 953 aa12.92□□□□□ -0.34
CHFR-201ENST00000266880 ATRIPQ8WXE1 791 aa12.92□□□□□ -0.34
CHFR-201ENST00000266880 ADCY5O95622 1261 aa12.92□□□□□ -0.34
CHFR-201ENST00000266880 TSG101Q99816 390 aa12.92□□□□□ -0.34
CHFR-201ENST00000266880 NAA15Q9BXJ9 866 aaKnown RBP12.92□□□□□ -0.34
CHFR-201ENST00000266880 ZNF76P36508 570 aa12.92□□□□□ -0.34
CHFR-201ENST00000266880 ANKS4BQ8N8V4 417 aa12.92□□□□□ -0.34
CHFR-201ENST00000266880 GBP6Q6ZN66 633 aa12.92□□□□□ -0.34
CHFR-201ENST00000266880 UACAQ9BZF9 1416 aa12.92□□□□□ -0.34
CHFR-201ENST00000266880 SPTY2D1Q68D10 685 aaPredicted RBP12.92□□□□□ -0.34
CHFR-201ENST00000266880 ANO10Q9NW15 660 aa12.92□□□□□ -0.34
CHFR-201ENST00000266880 YEATS4O95619 227 aa12.91□□□□□ -0.34
CHFR-201ENST00000266880 PPP1R12BO60237 982 aaPredicted RBP12.91□□□□□ -0.34
CHFR-201ENST00000266880 USO1O60763 962 aaKnown RBP12.91□□□□□ -0.34
CHFR-201ENST00000266880 KIF4AO95239 1232 aa12.91□□□□□ -0.34
CHFR-201ENST00000266880 GNAI3P08754 354 aa12.91□□□□□ -0.34
CHFR-201ENST00000266880 ANAPC4Q9UJX5 808 aa12.91□□□□□ -0.34
CHFR-201ENST00000266880 WASHC2CQ9Y4E1 1318 aa12.91□□□□□ -0.34
CHFR-201ENST00000266880 CERS3Q8IU89 383 aa12.91□□□□□ -0.34
CHFR-201ENST00000266880 DRC1Q96MC2 740 aa12.91□□□□□ -0.34
CHFR-201ENST00000266880 PRDM2Q13029 1718 aa12.91□□□□□ -0.34
CHFR-201ENST00000266880 ZSCAN31Q96LW9 406 aaPredicted RBP12.91□□□□□ -0.34
CHFR-201ENST00000266880 KIF3CO14782 793 aa12.91□□□□□ -0.34
CHFR-201ENST00000266880 TMCO4Q5TGY1 634 aa12.91□□□□□ -0.34
CHFR-201ENST00000266880 CWC27Q6UX04 472 aaKnown RBP12.91□□□□□ -0.34
CHFR-201ENST00000266880 PPP1R1BQ9UD71 204 aaPredicted RBP12.91□□□□□ -0.34
CHFR-201ENST00000266880 STX1AQ16623 288 aa12.9□□□□□ -0.34
CHFR-201ENST00000266880 IKBKGQ9Y6K9 419 aa12.9□□□□□ -0.34
CHFR-201ENST00000266880 DHX57Q6P158 1386 aaKnown RBP12.9□□□□□ -0.34
CHFR-201ENST00000266880 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
CHFR-201ENST00000266880 RSRC1Q96IZ7 334 aaKnown RBP12.9□□□□□ -0.34
CHFR-201ENST00000266880 NACAP1Q9BZK3 213 aa12.9□□□□□ -0.34
CHFR-201ENST00000266880 GNL3LQ9NVN8 582 aaKnown RBP12.9□□□□□ -0.34
CHFR-201ENST00000266880 AACSQ86V21 672 aa12.9□□□□□ -0.34
CHFR-201ENST00000266880 C10orf67Q8IYJ2 551 aa12.9□□□□□ -0.34
CHFR-201ENST00000266880 UBAC1Q9BSL1 405 aa12.9□□□□□ -0.34
CHFR-201ENST00000266880 HNRNPMP52272 730 aaKnown RBP eCLIP12.9□□□□□ -0.34
CHFR-201ENST00000266880 CEP131Q9UPN4 1083 aa12.9□□□□□ -0.34
CHFR-201ENST00000266880 SSFA2P28290 1259 aa12.9□□□□□ -0.34
CHFR-201ENST00000266880 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
CHFR-201ENST00000266880 ZBTB16Q05516 673 aa12.9□□□□□ -0.35
CHFR-201ENST00000266880 SEPT14Q6ZU15 432 aa12.89□□□□□ -0.35
CHFR-201ENST00000266880 JADE2Q9NQC1 790 aa12.89□□□□□ -0.35
CHFR-201ENST00000266880 GCC1Q96CN9 775 aa12.89□□□□□ -0.35
CHFR-201ENST00000266880 CNNM1Q9NRU3 951 aa12.89□□□□□ -0.35
CHFR-201ENST00000266880 NOP2P46087 812 aaKnown RBP12.89□□□□□ -0.35
CHFR-201ENST00000266880 CLNS1AP54105 237 aaKnown RBP12.89□□□□□ -0.35
CHFR-201ENST00000266880 TSNARE1Q96NA8 513 aa12.89□□□□□ -0.35
CHFR-201ENST00000266880 BIN1O00499 593 aa12.89□□□□□ -0.35
CHFR-201ENST00000266880 ZNF830Q96NB3 372 aaPredicted RBP12.89□□□□□ -0.35
CHFR-201ENST00000266880 CFAP58Q5T655 872 aa12.89□□□□□ -0.35
CHFR-201ENST00000266880 ADAMTS8Q9UP79 889 aa12.89□□□□□ -0.35
CHFR-201ENST00000266880 IGSF3O75054 1194 aa12.89□□□□□ -0.35
CHFR-201ENST00000266880 PDE1CQ14123 709 aaPredicted RBP12.89□□□□□ -0.35
CHFR-201ENST00000266880 KIF6Q6ZMV9 814 aa12.89□□□□□ -0.35
CHFR-201ENST00000266880 FEZ2Q9UHY8 353 aaPredicted RBP12.88□□□□□ -0.35
CHFR-201ENST00000266880 CCDC155Q8N6L0 562 aa12.88□□□□□ -0.35
CHFR-201ENST00000266880 PSMC4P43686 418 aa12.88□□□□□ -0.35
CHFR-201ENST00000266880 TPD52P55327 224 aaPredicted RBP12.88□□□□□ -0.35
CHFR-201ENST00000266880 GNG11P61952 73 aa12.88□□□□□ -0.35
CHFR-201ENST00000266880 TSR2Q969E8 191 aaKnown RBP12.88□□□□□ -0.35
CHFR-201ENST00000266880 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.88□□□□□ -0.35
CHFR-201ENST00000266880 V9GYY5 206 aaPredicted RBP12.88□□□□□ -0.35
CHFR-201ENST00000266880 CCDC171Q6TFL3 1326 aa12.88□□□□□ -0.35
CHFR-201ENST00000266880 CCDC158Q5M9N0 1113 aa12.88□□□□□ -0.35
CHFR-201ENST00000266880 BCAR3O75815 825 aa12.88□□□□□ -0.35
CHFR-201ENST00000266880 DNAJC21Q5F1R6 531 aaKnown RBP12.88□□□□□ -0.35
CHFR-201ENST00000266880 DDX46Q7L014 1031 aaKnown RBP12.88□□□□□ -0.35
CHFR-201ENST00000266880 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
CHFR-201ENST00000266880 CCDC7Q96M83 1385 aa12.88□□□□□ -0.35
CHFR-201ENST00000266880 USP5P45974 858 aa12.88□□□□□ -0.35
CHFR-201ENST00000266880 FAM160A1Q05DH4 1040 aa12.88□□□□□ -0.35
CHFR-201ENST00000266880 OTUD6BQ8N6M0 293 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms