RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 GOPCQ9HD26 462 aa17.35■□□□□ 0.37
AFF4-201ENST00000265343 PDS5BQ9NTI5 1447 aa17.35■□□□□ 0.37
AFF4-201ENST00000265343 GOLIM4O00461 696 aa17.34■□□□□ 0.37
AFF4-201ENST00000265343 NUP88Q99567 741 aaPredicted RBP17.34■□□□□ 0.37
AFF4-201ENST00000265343 EBAG9O00559 213 aa17.34■□□□□ 0.37
AFF4-201ENST00000265343 SH3BGRP55822 239 aaPredicted RBP17.34■□□□□ 0.37
AFF4-201ENST00000265343 PLVAPQ9BX97 442 aa17.34■□□□□ 0.37
AFF4-201ENST00000265343 DDX23Q9BUQ8 820 aaKnown RBP17.34■□□□□ 0.37
AFF4-201ENST00000265343 CCDC50Q8IVM0 306 aa17.34■□□□□ 0.37
AFF4-201ENST00000265343 GAS2L2Q8NHY3 880 aa17.34■□□□□ 0.37
AFF4-201ENST00000265343 SMAP1Q8IYB5 467 aaPredicted RBP17.33■□□□□ 0.37
AFF4-201ENST00000265343 CCDC178Q5BJE1 867 aa17.33■□□□□ 0.37
AFF4-201ENST00000265343 IKQ13123 557 aaPredicted RBP17.33■□□□□ 0.36
AFF4-201ENST00000265343 ATF7IPQ6VMQ6 1270 aa17.33■□□□□ 0.36
AFF4-201ENST00000265343 PIP4K2BP78356 416 aa17.33■□□□□ 0.36
AFF4-201ENST00000265343 GBP6Q6ZN66 633 aa17.33■□□□□ 0.36
AFF4-201ENST00000265343 HMGB1P09429 215 aaKnown RBP17.33■□□□□ 0.36
AFF4-201ENST00000265343 RASSF4Q9H2L5 321 aa17.33■□□□□ 0.36
AFF4-201ENST00000265343 TMCO5BA8MYB1 307 aa17.33■□□□□ 0.36
AFF4-201ENST00000265343 CCDC155Q8N6L0 562 aa17.33■□□□□ 0.36
AFF4-201ENST00000265343 FERP16591 822 aa17.32■□□□□ 0.36
AFF4-201ENST00000265343 MLECQ14165 292 aa17.32■□□□□ 0.36
AFF4-201ENST00000265343 ZFYP08048 801 aaPredicted RBP17.32■□□□□ 0.36
AFF4-201ENST00000265343 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
AFF4-201ENST00000265343 ATP2B1P20020 1258 aa17.32■□□□□ 0.36
AFF4-201ENST00000265343 CACNA2D4Q7Z3S7 1137 aa17.32■□□□□ 0.36
AFF4-201ENST00000265343 FBF1Q8TES7 1133 aa17.32■□□□□ 0.36
AFF4-201ENST00000265343 CCDC196A0A1B0GTZ2 297 aa17.32■□□□□ 0.36
AFF4-201ENST00000265343 HLTFQ14527 1009 aaKnown RBP eCLIP17.32■□□□□ 0.36
AFF4-201ENST00000265343 ADCY5O95622 1261 aa17.31■□□□□ 0.36
AFF4-201ENST00000265343 CASTP20810 708 aaKnown RBP17.31■□□□□ 0.36
AFF4-201ENST00000265343 UBE4AQ14139 1066 aa17.31■□□□□ 0.36
AFF4-201ENST00000265343 CCDC6Q16204 474 aa17.31■□□□□ 0.36
AFF4-201ENST00000265343 NOL3O60936 208 aaKnown RBP17.31■□□□□ 0.36
AFF4-201ENST00000265343 KIF5BP33176 963 aa17.31■□□□□ 0.36
AFF4-201ENST00000265343 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
AFF4-201ENST00000265343 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
AFF4-201ENST00000265343 UBE2HP62256 183 aa17.31■□□□□ 0.36
AFF4-201ENST00000265343 SOGA3Q5TF21 947 aa17.31■□□□□ 0.36
AFF4-201ENST00000265343 RAB34Q9BZG1 259 aa17.31■□□□□ 0.36
AFF4-201ENST00000265343 KANK3Q6NY19 840 aa17.31■□□□□ 0.36
AFF4-201ENST00000265343 B4GALNT4Q76KP1 1039 aa17.31■□□□□ 0.36
AFF4-201ENST00000265343 BCCIPQ9P287 314 aaKnown RBP eCLIP17.31■□□□□ 0.36
AFF4-201ENST00000265343 NAP1L3Q99457 506 aaPredicted RBP17.3■□□□□ 0.36
AFF4-201ENST00000265343 HECW1Q76N89 1606 aa17.3■□□□□ 0.36
AFF4-201ENST00000265343 CCDC121Q6ZUS5 278 aa17.3■□□□□ 0.36
AFF4-201ENST00000265343 PAIP2Q9BPZ3 127 aaKnown RBP17.3■□□□□ 0.36
AFF4-201ENST00000265343 IKBKGQ9Y6K9 419 aa17.3■□□□□ 0.36
AFF4-201ENST00000265343 KLHL40Q2TBA0 621 aa17.3■□□□□ 0.36
AFF4-201ENST00000265343 CLGNO14967 610 aa17.3■□□□□ 0.36
AFF4-201ENST00000265343 SARNPP82979 210 aaKnown RBP17.3■□□□□ 0.36
AFF4-201ENST00000265343 HMGB1P1B2RPK0 211 aaPredicted RBP17.29■□□□□ 0.36
AFF4-201ENST00000265343 NEBLO76041 1014 aa17.29■□□□□ 0.36
AFF4-201ENST00000265343 ADAMTS8Q9UP79 889 aa17.29■□□□□ 0.36
AFF4-201ENST00000265343 TTC39AQ5SRH9 613 aa17.29■□□□□ 0.36
AFF4-201ENST00000265343 NOB1Q9ULX3 412 aaKnown RBP17.29■□□□□ 0.36
AFF4-201ENST00000265343 EHBP1L1Q8N3D4 1523 aa17.29■□□□□ 0.36
AFF4-201ENST00000265343 MAATS1Q7Z4T9 603 aa17.29■□□□□ 0.36
AFF4-201ENST00000265343 FERMT1Q9BQL6 677 aa17.29■□□□□ 0.36
AFF4-201ENST00000265343 RASAL2Q9UJF2 1139 aa17.29■□□□□ 0.36
AFF4-201ENST00000265343 KIF4AO95239 1232 aa17.28■□□□□ 0.36
AFF4-201ENST00000265343 GRIPAP1Q4V328 841 aa17.28■□□□□ 0.36
AFF4-201ENST00000265343 EVA1CP58658 441 aa17.28■□□□□ 0.36
AFF4-201ENST00000265343 DHX37Q8IY37 1157 aaKnown RBP17.28■□□□□ 0.36
AFF4-201ENST00000265343 CTAGE1Q96RT6 745 aa17.28■□□□□ 0.36
AFF4-201ENST00000265343 A0A1B0GUL7 405 aa17.28■□□□□ 0.36
AFF4-201ENST00000265343 KIF6Q6ZMV9 814 aa17.28■□□□□ 0.36
AFF4-201ENST00000265343 CETN1Q12798 172 aa17.28■□□□□ 0.36
AFF4-201ENST00000265343 CTCFLQ8NI51 663 aaPredicted RBP17.28■□□□□ 0.36
AFF4-201ENST00000265343 CTAGE9A4FU28 777 aa17.28■□□□□ 0.36
AFF4-201ENST00000265343 SH2D4BQ5SQS7 431 aa17.28■□□□□ 0.36
AFF4-201ENST00000265343 NECTIN2Q92692 538 aa17.28■□□□□ 0.36
AFF4-201ENST00000265343 AIMP1Q12904 312 aaKnown RBP17.27■□□□□ 0.36
AFF4-201ENST00000265343 STIM2Q9P246 746 aa17.27■□□□□ 0.36
AFF4-201ENST00000265343 MPNDQ8N594 471 aa17.27■□□□□ 0.36
AFF4-201ENST00000265343 LARP1Q6PKG0 1096 aaKnown RBP17.27■□□□□ 0.36
AFF4-201ENST00000265343 CCDC172P0C7W6 258 aa17.27■□□□□ 0.36
AFF4-201ENST00000265343 OTUD6BQ8N6M0 293 aa17.27■□□□□ 0.36
AFF4-201ENST00000265343 UBAC1Q9BSL1 405 aa17.27■□□□□ 0.36
AFF4-201ENST00000265343 USH1CQ9Y6N9 552 aa17.27■□□□□ 0.36
AFF4-201ENST00000265343 JAKMIP1Q96N16 626 aaKnown RBP17.27■□□□□ 0.35
AFF4-201ENST00000265343 ZNF287Q9HBT7 754 aa17.27■□□□□ 0.35
AFF4-201ENST00000265343 CECR2Q9BXF3 1484 aa17.27■□□□□ 0.35
AFF4-201ENST00000265343 CAPN2P17655 700 aa17.27■□□□□ 0.35
AFF4-201ENST00000265343 CAMK4Q16566 473 aa17.27■□□□□ 0.35
AFF4-201ENST00000265343 TCP11L2Q8N4U5 519 aa17.26■□□□□ 0.35
AFF4-201ENST00000265343 LIG1P18858 919 aa17.26■□□□□ 0.35
AFF4-201ENST00000265343 PRPHP41219 470 aa17.26■□□□□ 0.35
AFF4-201ENST00000265343 RBM25P49756 843 aaKnown RBP17.26■□□□□ 0.35
AFF4-201ENST00000265343 HNRNPMP52272 730 aaKnown RBP eCLIP17.26■□□□□ 0.352e-6■■■□□ 18.9
AFF4-201ENST00000265343 STK3Q13188 491 aa17.26■□□□□ 0.35
AFF4-201ENST00000265343 OGFRQ9NZT2 677 aa17.26■□□□□ 0.35
AFF4-201ENST00000265343 RAB11FIP3O75154 756 aa17.26■□□□□ 0.35
AFF4-201ENST00000265343 TWISTNBQ3B726 338 aaPredicted RBP17.26■□□□□ 0.35
AFF4-201ENST00000265343 SPDYE4A6NLX3 237 aa17.25■□□□□ 0.35
AFF4-201ENST00000265343 EFCAB5A4FU69 1503 aa17.25■□□□□ 0.35
AFF4-201ENST00000265343 JADE2Q9NQC1 790 aa17.25■□□□□ 0.35
AFF4-201ENST00000265343 SMC6Q96SB8 1091 aa17.25■□□□□ 0.35
AFF4-201ENST00000265343 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
AFF4-201ENST00000265343 GOLGA1Q92805 767 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms