RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 FAM177A1Q8N128 213 aaPredicted RBP5.6□□□□□ -1.51
RC3H1-201ENST00000258349 GCOM1H8Y6P7 765 aaPredicted RBP5.6□□□□□ -1.51
RC3H1-201ENST00000258349 MYZAPP0CAP1 466 aa5.6□□□□□ -1.51
RC3H1-201ENST00000258349 ABTB2Q8N961 1025 aa5.6□□□□□ -1.51
RC3H1-201ENST00000258349 VIRMAQ69YN4 1812 aaKnown RBP5.6□□□□□ -1.51
RC3H1-201ENST00000258349 UBAC1Q9BSL1 405 aa5.6□□□□□ -1.51
RC3H1-201ENST00000258349 ANO10Q9NW15 660 aa5.6□□□□□ -1.51
RC3H1-201ENST00000258349 EIF5P55010 431 aaKnown RBP5.6□□□□□ -1.51
RC3H1-201ENST00000258349 JAKMIP1Q96N16 626 aaKnown RBP5.6□□□□□ -1.51
RC3H1-201ENST00000258349 FEZ1Q99689 392 aa5.6□□□□□ -1.51
RC3H1-201ENST00000258349 SEPT11Q9NVA2 429 aaKnown RBP5.6□□□□□ -1.51
RC3H1-201ENST00000258349 SNAPC4Q5SXM2 1469 aa5.6□□□□□ -1.51
RC3H1-201ENST00000258349 CETN2P41208 172 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 HDGFL1Q5TGJ6 251 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 SEC63Q9UGP8 760 aaKnown RBP5.59□□□□□ -1.51
RC3H1-201ENST00000258349 SLC4A2P04920 1241 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 CFAP100Q494V2 611 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 SOGA3Q5TF21 947 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 TSG101Q99816 390 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 PDCL3Q9H2J4 239 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 NF2P35240 595 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 MAP2K1Q02750 393 aaPredicted RBP5.59□□□□□ -1.51
RC3H1-201ENST00000258349 ALS2CR12Q96Q35 445 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 KIF20BQ96Q89 1820 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 EXOSC9Q06265 439 aaKnown RBP5.59□□□□□ -1.51
RC3H1-201ENST00000258349 FKBP15Q5T1M5 1219 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 CDCA7LQ96GN5 454 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 ZNF287Q9HBT7 754 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 NLRP2Q9NX02 1062 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 HMGB1P09429 215 aaKnown RBP5.59□□□□□ -1.51
RC3H1-201ENST00000258349 ATP2B1P20020 1258 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 STAMBPO95630 424 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 EHBP1Q8NDI1 1231 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 CLIP2Q9UDT6 1046 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 PAXBP1Q9Y5B6 917 aa5.59□□□□□ -1.51
RC3H1-201ENST00000258349 RTEL1-TNFRSF6BF6WH68 1400 aa5.59□□□□□ -1.52
RC3H1-201ENST00000258349 ALDH1L2Q3SY69 923 aa5.59□□□□□ -1.52
RC3H1-201ENST00000258349 PODXL2Q9NZ53 605 aa5.59□□□□□ -1.52
RC3H1-201ENST00000258349 TDO2P48775 406 aa5.59□□□□□ -1.52
RC3H1-201ENST00000258349 TAOK3Q9H2K8 898 aa5.59□□□□□ -1.52
RC3H1-201ENST00000258349 MYH7P12883 1935 aa5.59□□□□□ -1.52
RC3H1-201ENST00000258349 NSD2O96028 1365 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 LRPPRCP42704 1394 aaKnown RBP5.58□□□□□ -1.52
RC3H1-201ENST00000258349 ABCA10Q8WWZ4 1543 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 CWC27Q6UX04 472 aaKnown RBP5.58□□□□□ -1.52
RC3H1-201ENST00000258349 GIGYF2Q6Y7W6 1299 aaKnown RBP5.58□□□□□ -1.52
RC3H1-201ENST00000258349 SPATA24Q86W54 205 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 TSR2Q969E8 191 aaKnown RBP5.58□□□□□ -1.52
RC3H1-201ENST00000258349 GGNBP2Q9H3C7 697 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 MYH8P13535 1937 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 KDM4AO75164 1064 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 PYM1Q9BRP8 204 aaKnown RBP5.58□□□□□ -1.52
RC3H1-201ENST00000258349 RPGRIP1LQ68CZ1 1315 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 KAT6AQ92794 2004 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 CCDC196A0A1B0GTZ2 297 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 BCAR3O75815 825 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 TOP1P11387 765 aaKnown RBP5.58□□□□□ -1.52
RC3H1-201ENST00000258349 IFFO1Q0D2I5 559 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 CCDC150Q8NCX0 1101 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 MPHOSPH8Q99549 860 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 BBXQ8WY36 941 aaPredicted RBP5.58□□□□□ -1.52
RC3H1-201ENST00000258349 MTMR7Q9Y216 660 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 DNMT1P26358 1616 aaKnown RBP5.58□□□□□ -1.52
RC3H1-201ENST00000258349 MATR3P43243 847 aaKnown RBP eCLIP5.58□□□□□ -1.525e-7■■□□□ 14.4
RC3H1-201ENST00000258349 CTR9Q6PD62 1173 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 SAMD1Q6SPF0 538 aaPredicted RBP5.58□□□□□ -1.52
RC3H1-201ENST00000258349 FAM114A1Q8IWE2 563 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 NUP133Q8WUM0 1156 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 NAA15Q9BXJ9 866 aaKnown RBP5.58□□□□□ -1.52
RC3H1-201ENST00000258349 SPG7Q9UQ90 795 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 PRIMPOLQ96LW4 560 aa5.58□□□□□ -1.52
RC3H1-201ENST00000258349 MAGI1Q96QZ7 1491 aaPredicted RBP5.57□□□□□ -1.52
RC3H1-201ENST00000258349 TNIP1Q15025 636 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 STK11IPQ8N1F8 1099 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 PRXQ9BXM0 1461 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 PLXNC1O60486 1568 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 MAP4K4O95819 1239 aaPredicted RBP5.57□□□□□ -1.52
RC3H1-201ENST00000258349 DDX12PQ92771 950 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 CDK19Q9BWU1 502 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 ZHX3Q9H4I2 956 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 CCDC171Q6TFL3 1326 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 A0A087WZG4 1122 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 ZNF692Q9BU19 519 aaPredicted RBP5.57□□□□□ -1.52
RC3H1-201ENST00000258349 NCOA1Q15788 1441 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 BTBD11A6QL63 1104 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 FCHSD2O94868 740 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 NLRP6P59044 892 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 ZNF644Q9H582 1327 aaPredicted RBP5.57□□□□□ -1.52
RC3H1-201ENST00000258349 MAST1Q9Y2H9 1570 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 HMGB2P26583 209 aaKnown RBP5.57□□□□□ -1.52
RC3H1-201ENST00000258349 CAMK4Q16566 473 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 PAF1Q8N7H5 531 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 NUP88Q99567 741 aaPredicted RBP5.57□□□□□ -1.52
RC3H1-201ENST00000258349 TATP17735 454 aaPredicted RBP5.57□□□□□ -1.52
RC3H1-201ENST00000258349 ATP2B2Q01814 1243 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 SMC1AQ14683 1233 aaKnown RBP5.57□□□□□ -1.52
RC3H1-201ENST00000258349 SRGAP3O43295 1099 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 USO1O60763 962 aaKnown RBP5.57□□□□□ -1.52
RC3H1-201ENST00000258349 FKBP4Q02790 459 aaKnown RBP eCLIP5.57□□□□□ -1.52
RC3H1-201ENST00000258349 CEP63Q96MT8 703 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms