RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 R3HCC1Q9Y3T6 440 aaKnown RBP16.44■□□□□ 0.22
VHL-201ENST00000256474 A2ML1A8K2U0 1454 aa16.44■□□□□ 0.22
VHL-201ENST00000256474 SRGAP3O43295 1099 aa16.43■□□□□ 0.22
VHL-201ENST00000256474 PTMSP20962 102 aa16.43■□□□□ 0.22
VHL-201ENST00000256474 CWC27Q6UX04 472 aaKnown RBP16.43■□□□□ 0.22
VHL-201ENST00000256474 SPG7Q9UQ90 795 aa16.43■□□□□ 0.22
VHL-201ENST00000256474 MED14O60244 1454 aa16.43■□□□□ 0.22
VHL-201ENST00000256474 KIAA1211Q6ZU35 1233 aa16.43■□□□□ 0.22
VHL-201ENST00000256474 GPT2Q8TD30 523 aa16.43■□□□□ 0.22
VHL-201ENST00000256474 KCNJ4P48050 445 aa16.42■□□□□ 0.22
VHL-201ENST00000256474 DNTTIP2Q5QJE6 756 aaKnown RBP16.42■□□□□ 0.22
VHL-201ENST00000256474 PIK3R4Q99570 1358 aa16.42■□□□□ 0.22
VHL-201ENST00000256474 CCDC173Q0VFZ6 552 aa16.42■□□□□ 0.22
VHL-201ENST00000256474 AIMP1Q12904 312 aaKnown RBP16.42■□□□□ 0.22
VHL-201ENST00000256474 ESYT1Q9BSJ8 1104 aa16.42■□□□□ 0.22
VHL-201ENST00000256474 GNAI3P08754 354 aa16.42■□□□□ 0.22
VHL-201ENST00000256474 TMEM131LA2VDJ0 1609 aa16.41■□□□□ 0.22
VHL-201ENST00000256474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.41■□□□□ 0.22
VHL-201ENST00000256474 GNAT3A8MTJ3 354 aa16.41■□□□□ 0.22
VHL-201ENST00000256474 TMEM63CQ9P1W3 806 aa16.41■□□□□ 0.22
VHL-201ENST00000256474 ATP7BP35670 1465 aa16.41■□□□□ 0.22
VHL-201ENST00000256474 ZDHHC9Q9Y397 364 aa16.41■□□□□ 0.22
VHL-201ENST00000256474 NCOA3Q9Y6Q9 1424 aa16.41■□□□□ 0.22
VHL-201ENST00000256474 TAOK2Q9UL54 1235 aa16.41■□□□□ 0.22
VHL-201ENST00000256474 PPP1R42Q7Z4L9 355 aa16.4■□□□□ 0.22
VHL-201ENST00000256474 TAF7Q15545 349 aaPredicted RBP16.4■□□□□ 0.22
VHL-201ENST00000256474 VSIG10Q8N0Z9 540 aa16.4■□□□□ 0.22
VHL-201ENST00000256474 CPSF1Q10570 1443 aaKnown RBP16.4■□□□□ 0.22
VHL-201ENST00000256474 ATP10DQ9P241 1426 aa16.39■□□□□ 0.21
VHL-201ENST00000256474 IL25Q9H293 177 aa16.39■□□□□ 0.21
VHL-201ENST00000256474 CWC22Q9HCG8 908 aaKnown RBP16.39■□□□□ 0.21
VHL-201ENST00000256474 CFAP74Q9C0B2 1584 aa16.39■□□□□ 0.21
VHL-201ENST00000256474 FIBPO43427 364 aa16.39■□□□□ 0.21
VHL-201ENST00000256474 FAM13BQ9NYF5 915 aa16.39■□□□□ 0.21
VHL-201ENST00000256474 CDK12Q9NYV4 1490 aaPredicted RBP16.39■□□□□ 0.21
VHL-201ENST00000256474 KCNQ3O43525 872 aa16.39■□□□□ 0.21
VHL-201ENST00000256474 CHMLP26374 656 aa16.39■□□□□ 0.21
VHL-201ENST00000256474 MPRIPQ6WCQ1 1025 aa16.38■□□□□ 0.21
VHL-201ENST00000256474 IL17REQ8NFR9 667 aa16.38■□□□□ 0.21
VHL-201ENST00000256474 AATKQ6ZMQ8 1374 aa16.38■□□□□ 0.21
VHL-201ENST00000256474 GADD45BO75293 160 aaPredicted RBP16.37■□□□□ 0.21
VHL-201ENST00000256474 ZSCAN30Q86W11 494 aa16.37■□□□□ 0.21
VHL-201ENST00000256474 PI4KAP2A4QPH2 592 aa16.37■□□□□ 0.21
VHL-201ENST00000256474 NBPF7P0C2Y1 421 aaPredicted RBP16.37■□□□□ 0.21
VHL-201ENST00000256474 TEFQ10587 303 aa16.37■□□□□ 0.21
VHL-201ENST00000256474 PI4KAP1Q8N8J0 262 aa16.37■□□□□ 0.21
VHL-201ENST00000256474 SIL1Q9H173 461 aa16.37■□□□□ 0.21
VHL-201ENST00000256474 LGR6Q9HBX8 967 aa16.37■□□□□ 0.21
VHL-201ENST00000256474 PREX1Q8TCU6 1659 aa16.37■□□□□ 0.21
VHL-201ENST00000256474 ZNF830Q96NB3 372 aaPredicted RBP16.37■□□□□ 0.21
VHL-201ENST00000256474 ISY1Q9ULR0 285 aaKnown RBP16.37■□□□□ 0.21
VHL-201ENST00000256474 LRRC59Q96AG4 307 aaKnown RBP16.36■□□□□ 0.21
VHL-201ENST00000256474 SRCIN1Q9C0H9 1055 aa16.36■□□□□ 0.21
VHL-201ENST00000256474 C9orf78Q9NZ63 289 aaPredicted RBP16.36■□□□□ 0.21
VHL-201ENST00000256474 TCEANC2Q96MN5 208 aa16.36■□□□□ 0.21
VHL-201ENST00000256474 CHPF2Q9P2E5 772 aa16.36■□□□□ 0.21
VHL-201ENST00000256474 PA2G4Q9UQ80 394 aaKnown RBP16.36■□□□□ 0.21
VHL-201ENST00000256474 TNRQ92752 1358 aa16.36■□□□□ 0.21
VHL-201ENST00000256474 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
VHL-201ENST00000256474 JARID2Q92833 1246 aaPredicted RBP16.36■□□□□ 0.21
VHL-201ENST00000256474 USP44Q9H0E7 712 aa16.36■□□□□ 0.21
VHL-201ENST00000256474 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
VHL-201ENST00000256474 DIAPH3Q9NSV4 1193 aa16.35■□□□□ 0.21
VHL-201ENST00000256474 BCL11BQ9C0K0 894 aaPredicted RBP16.33■□□□□ 0.21
VHL-201ENST00000256474 FERMT3Q86UX7 667 aa16.33■□□□□ 0.2
VHL-201ENST00000256474 RGS12O14924 1447 aa16.33■□□□□ 0.2
VHL-201ENST00000256474 CNPY2Q9Y2B0 182 aa16.33■□□□□ 0.2
VHL-201ENST00000256474 CASTP20810 708 aaKnown RBP16.32■□□□□ 0.2
VHL-201ENST00000256474 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
VHL-201ENST00000256474 CCDC83Q8IWF9 413 aa16.32■□□□□ 0.2
VHL-201ENST00000256474 RHPN1Q8TCX5 695 aa16.32■□□□□ 0.2
VHL-201ENST00000256474 HOXC9P31274 260 aa16.32■□□□□ 0.2
VHL-201ENST00000256474 FOSBP53539 338 aa16.32■□□□□ 0.2
VHL-201ENST00000256474 ESCO1Q5FWF5 840 aa16.32■□□□□ 0.2
VHL-201ENST00000256474 USP48Q86UV5 1035 aa16.32■□□□□ 0.2
VHL-201ENST00000256474 KCNA6P17658 529 aa16.31■□□□□ 0.2
VHL-201ENST00000256474 ZNF530Q6P9A1 599 aaPredicted RBP16.31■□□□□ 0.2
VHL-201ENST00000256474 FLT4P35916 1363 aa16.31■□□□□ 0.2
VHL-201ENST00000256474 PSME1Q06323 249 aa16.31■□□□□ 0.2
VHL-201ENST00000256474 CWF19L2Q2TBE0 894 aaKnown RBP16.31■□□□□ 0.2
VHL-201ENST00000256474 PRPF40BQ6NWY9 871 aaKnown RBP16.31■□□□□ 0.2
VHL-201ENST00000256474 SMC3Q9UQE7 1217 aa16.31■□□□□ 0.2
VHL-201ENST00000256474 KIAA0232Q92628 1395 aa16.31■□□□□ 0.2
VHL-201ENST00000256474 NECAB1Q8N987 351 aa16.31■□□□□ 0.2
VHL-201ENST00000256474 CCDC8Q9H0W5 538 aaPredicted RBP16.31■□□□□ 0.2
VHL-201ENST00000256474 KIF20BQ96Q89 1820 aa16.31■□□□□ 0.2
VHL-201ENST00000256474 SOS1Q07889 1333 aaPredicted RBP16.3■□□□□ 0.2
VHL-201ENST00000256474 PLEKHG3A1L390 1219 aa16.3■□□□□ 0.2
VHL-201ENST00000256474 GLIPR1L2Q4G1C9 344 aa16.3■□□□□ 0.2
VHL-201ENST00000256474 USP25Q9UHP3 1055 aa16.3■□□□□ 0.2
VHL-201ENST00000256474 TMEM2Q9UHN6 1383 aa16.3■□□□□ 0.2
VHL-201ENST00000256474 PPFIA3O75145 1194 aa16.3■□□□□ 0.2
VHL-201ENST00000256474 IFIT2P09913 472 aaKnown RBP16.3■□□□□ 0.2
VHL-201ENST00000256474 STK3Q13188 491 aa16.3■□□□□ 0.2
VHL-201ENST00000256474 RASEFQ8IZ41 740 aa16.3■□□□□ 0.2
VHL-201ENST00000256474 JAKMIP1Q96N16 626 aaKnown RBP16.3■□□□□ 0.2
VHL-201ENST00000256474 TSPY26PQ9H489 355 aa16.3■□□□□ 0.2
VHL-201ENST00000256474 PRAMEF22A3QJZ6 481 aa16.3■□□□□ 0.2
VHL-201ENST00000256474 CYP2E1P05181 493 aaPredicted RBP16.3■□□□□ 0.2
VHL-201ENST00000256474 LRSAM1Q6UWE0 723 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms