RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 PANK2Q9BZ23 570 aa21.13■□□□□ 0.97
FOXA1-201ENST00000250448 CRB1P82279 1406 aa21.13■□□□□ 0.97
FOXA1-201ENST00000250448 TWISTNBQ3B726 338 aaPredicted RBP21.13■□□□□ 0.97
FOXA1-201ENST00000250448 IL17REQ8NFR9 667 aa21.12■□□□□ 0.97
FOXA1-201ENST00000250448 SNX21Q969T3 373 aa21.12■□□□□ 0.97
FOXA1-201ENST00000250448 CHL1O00533 1208 aa21.12■□□□□ 0.97
FOXA1-201ENST00000250448 DDIT3P35638 169 aa21.12■□□□□ 0.97
FOXA1-201ENST00000250448 ALDH1L2Q3SY69 923 aa21.12■□□□□ 0.97
FOXA1-201ENST00000250448 LNPKQ9C0E8 428 aa21.11■□□□□ 0.97
FOXA1-201ENST00000250448 MRE11P49959 708 aa21.1■□□□□ 0.97
FOXA1-201ENST00000250448 CHD1LQ86WJ1 897 aa21.1■□□□□ 0.97
FOXA1-201ENST00000250448 TSPYL4Q9UJ04 414 aa21.1■□□□□ 0.97
FOXA1-201ENST00000250448 MAP3K5Q99683 1374 aa21.1■□□□□ 0.97
FOXA1-201ENST00000250448 LGR6Q9HBX8 967 aa21.1■□□□□ 0.97
FOXA1-201ENST00000250448 PRDM11Q9NQV5 511 aa21.1■□□□□ 0.97
FOXA1-201ENST00000250448 ZNF530Q6P9A1 599 aaPredicted RBP21.09■□□□□ 0.97
FOXA1-201ENST00000250448 CRYBG1Q9Y4K1 1723 aa21.09■□□□□ 0.97
FOXA1-201ENST00000250448 A0A0U1RQG5 324 aaPredicted RBP21.08■□□□□ 0.96
FOXA1-201ENST00000250448 PDE4CQ08493 712 aa21.08■□□□□ 0.96
FOXA1-201ENST00000250448 MPRIPQ6WCQ1 1025 aa21.07■□□□□ 0.96
FOXA1-201ENST00000250448 CIZ1Q9ULV3 898 aaPredicted RBP21.07■□□□□ 0.96
FOXA1-201ENST00000250448 COL18A1P39060 1754 aa21.07■□□□□ 0.96
FOXA1-201ENST00000250448 BMP2KLQ5H9B9 411 aa21.07■□□□□ 0.96
FOXA1-201ENST00000250448 HSP90AB1P08238 724 aaKnown RBP21.06■□□□□ 0.96
FOXA1-201ENST00000250448 ISY1Q9ULR0 285 aaKnown RBP21.06■□□□□ 0.96
FOXA1-201ENST00000250448 LTBP4Q8N2S1 1624 aa21.06■□□□□ 0.96
FOXA1-201ENST00000250448 PLEKHO1Q53GL0 409 aaPredicted RBP21.05■□□□□ 0.96
FOXA1-201ENST00000250448 KLHL34Q8N239 644 aa21.05■□□□□ 0.96
FOXA1-201ENST00000250448 GRPEL1Q9HAV7 217 aa21.05■□□□□ 0.96
FOXA1-201ENST00000250448 BRPF1P55201 1214 aaPredicted RBP21.04■□□□□ 0.96
FOXA1-201ENST00000250448 MRPL50Q8N5N7 158 aaKnown RBP21.04■□□□□ 0.96
FOXA1-201ENST00000250448 TNPO1Q92973 898 aaKnown RBP21.04■□□□□ 0.96
FOXA1-201ENST00000250448 ZNF428Q96B54 188 aa21.04■□□□□ 0.96
FOXA1-201ENST00000250448 CLCN1P35523 988 aa21.03■□□□□ 0.96
FOXA1-201ENST00000250448 NHSL1Q5SYE7 1610 aa21.03■□□□□ 0.96
FOXA1-201ENST00000250448 ROBO1Q9Y6N7 1651 aa21.03■□□□□ 0.96
FOXA1-201ENST00000250448 PIP4K2BP78356 416 aa21.03■□□□□ 0.96
FOXA1-201ENST00000250448 NECTIN2Q92692 538 aa21.03■□□□□ 0.96
FOXA1-201ENST00000250448 HTATSF1O43719 755 aaKnown RBP21.02■□□□□ 0.96
FOXA1-201ENST00000250448 RAPGEF4Q8WZA2 1011 aa21.02■□□□□ 0.96
FOXA1-201ENST00000250448 GCC1Q96CN9 775 aa21.02■□□□□ 0.96
FOXA1-201ENST00000250448 GBP4Q96PP9 640 aa21.02■□□□□ 0.96
FOXA1-201ENST00000250448 STRN4Q9NRL3 753 aa21.02■□□□□ 0.96
FOXA1-201ENST00000250448 CPDO75976 1380 aa21.02■□□□□ 0.96
FOXA1-201ENST00000250448 NCAPD2Q15021 1401 aa21.01■□□□□ 0.95
FOXA1-201ENST00000250448 PDIA4P13667 645 aaKnown RBP21.01■□□□□ 0.95
FOXA1-201ENST00000250448 RAB3GAP1Q15042 981 aa21.01■□□□□ 0.95
FOXA1-201ENST00000250448 KIF2CQ99661 725 aa21.01■□□□□ 0.95
FOXA1-201ENST00000250448 CHMP4BQ9H444 224 aaKnown RBP21.01■□□□□ 0.95
FOXA1-201ENST00000250448 C1orf141Q5JVX7 400 aa21.01■□□□□ 0.95
FOXA1-201ENST00000250448 ANKRD45Q5TZF3 282 aa21.01■□□□□ 0.95
FOXA1-201ENST00000250448 ZBTB7BO15156 539 aaPredicted RBP21■□□□□ 0.95
FOXA1-201ENST00000250448 CAMTA1Q9Y6Y1 1673 aa21■□□□□ 0.95
FOXA1-201ENST00000250448 TAF7Q15545 349 aaPredicted RBP21■□□□□ 0.95
FOXA1-201ENST00000250448 AKAP4Q5JQC9 854 aa21■□□□□ 0.95
FOXA1-201ENST00000250448 MEGF6O75095 1541 aa21■□□□□ 0.95
FOXA1-201ENST00000250448 AMOTQ4VCS5 1084 aa20.99■□□□□ 0.95
FOXA1-201ENST00000250448 KCNQ3O43525 872 aa20.99■□□□□ 0.95
FOXA1-201ENST00000250448 TOM1L2Q6ZVM7 507 aa20.99■□□□□ 0.95
FOXA1-201ENST00000250448 ZMYND15Q9H091 742 aa20.99■□□□□ 0.95
FOXA1-201ENST00000250448 C1orf115Q9H7X2 142 aa20.99■□□□□ 0.95
FOXA1-201ENST00000250448 ARHGAP45Q92619 1136 aa20.98■□□□□ 0.95
FOXA1-201ENST00000250448 LRRC37A3O60309 1634 aa20.98■□□□□ 0.95
FOXA1-201ENST00000250448 TBC1D9Q6ZT07 1266 aa20.98■□□□□ 0.95
FOXA1-201ENST00000250448 TATP17735 454 aaPredicted RBP20.97■□□□□ 0.95
FOXA1-201ENST00000250448 PTMSP20962 102 aa20.97■□□□□ 0.95
FOXA1-201ENST00000250448 ABCA3Q99758 1704 aa20.97■□□□□ 0.95
FOXA1-201ENST00000250448 CEMIPQ8WUJ3 1361 aa20.96■□□□□ 0.95
FOXA1-201ENST00000250448 LMO7Q8WWI1 1683 aa20.96■□□□□ 0.95
FOXA1-201ENST00000250448 FAM208AQ9UK61 1670 aaKnown RBP20.96■□□□□ 0.95
FOXA1-201ENST00000250448 CD2BP2O95400 341 aaKnown RBP20.96■□□□□ 0.95
FOXA1-201ENST00000250448 TEFQ10587 303 aa20.96■□□□□ 0.95
FOXA1-201ENST00000250448 SKOR2Q2VWA4 1001 aaPredicted RBP20.96■□□□□ 0.95
FOXA1-201ENST00000250448 K7ELQ4 463 aaPredicted RBP20.96■□□□□ 0.95
FOXA1-201ENST00000250448 RNMTO43148 476 aaKnown RBP20.96■□□□□ 0.95
FOXA1-201ENST00000250448 HSP90AA1P07900 732 aaKnown RBP20.96■□□□□ 0.95
FOXA1-201ENST00000250448 NAP1L5Q96NT1 182 aaPredicted RBP20.96■□□□□ 0.95
FOXA1-201ENST00000250448 LARP1Q6PKG0 1096 aaKnown RBP20.95■□□□□ 0.94
FOXA1-201ENST00000250448 ABCC4O15439 1325 aa20.95■□□□□ 0.94
FOXA1-201ENST00000250448 SLC4A2P04920 1241 aa20.94■□□□□ 0.94
FOXA1-201ENST00000250448 EVA1CP58658 441 aa20.94■□□□□ 0.94
FOXA1-201ENST00000250448 WDR17Q8IZU2 1322 aa20.94■□□□□ 0.94
FOXA1-201ENST00000250448 G2E3Q7L622 706 aa20.93■□□□□ 0.94
FOXA1-201ENST00000250448 SIRT2Q8IXJ6 389 aa20.93■□□□□ 0.94
FOXA1-201ENST00000250448 FOXD4L1Q9NU39 408 aa20.93■□□□□ 0.94
FOXA1-201ENST00000250448 GAS2L3Q86XJ1 694 aa20.93■□□□□ 0.94
FOXA1-201ENST00000250448 COL5A2P05997 1499 aaPredicted RBP20.93■□□□□ 0.94
FOXA1-201ENST00000250448 BTBD11A6QL63 1104 aa20.92■□□□□ 0.94
FOXA1-201ENST00000250448 CDC45O75419 566 aa20.92■□□□□ 0.94
FOXA1-201ENST00000250448 BTG4Q9NY30 223 aa20.91■□□□□ 0.94
FOXA1-201ENST00000250448 ESPNB1AK53 854 aa20.91■□□□□ 0.94
FOXA1-201ENST00000250448 CYP27B1O15528 508 aa20.91■□□□□ 0.94
FOXA1-201ENST00000250448 RBM42Q9BTD8 480 aaKnown RBP20.91■□□□□ 0.94
FOXA1-201ENST00000250448 PHKG2P15735 406 aa20.9■□□□□ 0.94
FOXA1-201ENST00000250448 BCL11BQ9C0K0 894 aaPredicted RBP20.9■□□□□ 0.94
FOXA1-201ENST00000250448 SPG7Q9UQ90 795 aa20.9■□□□□ 0.94
FOXA1-201ENST00000250448 ADAMTS2O95450 1211 aa20.9■□□□□ 0.94
FOXA1-201ENST00000250448 EIF2S2P20042 333 aaKnown RBP20.9■□□□□ 0.94
FOXA1-201ENST00000250448 FGD1P98174 961 aa20.89■□□□□ 0.94
FOXA1-201ENST00000250448 ERBB4Q15303 1308 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms