RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 GNAI2P04899 355 aa27.16■■□□□ 1.94
RNF39-201ENST00000244360 C16orf71Q8IYS4 520 aaPredicted RBP27.16■■□□□ 1.94
RNF39-201ENST00000244360 MST1RQ04912 1400 aa27.16■■□□□ 1.94
RNF39-201ENST00000244360 KIF1AQ12756 1690 aa27.16■■□□□ 1.94
RNF39-201ENST00000244360 CAMTA1Q9Y6Y1 1673 aa27.16■■□□□ 1.94
RNF39-201ENST00000244360 FKBP5Q13451 457 aaPredicted RBP27.16■■□□□ 1.94
RNF39-201ENST00000244360 GCP02774 474 aa27.15■■□□□ 1.94
RNF39-201ENST00000244360 GNAI3P08754 354 aa27.14■■□□□ 1.94
RNF39-201ENST00000244360 OTUD7AQ8TE49 926 aaPredicted RBP27.14■■□□□ 1.94
RNF39-201ENST00000244360 HOXB7P09629 217 aa27.13■■□□□ 1.93
RNF39-201ENST00000244360 OVOS2A0A0G2JMS6 1433 aa27.12■■□□□ 1.93
RNF39-201ENST00000244360 AKAP4Q5JQC9 854 aa27.12■■□□□ 1.93
RNF39-201ENST00000244360 C1orf167Q5SNV9 1468 aa27.11■■□□□ 1.93
RNF39-201ENST00000244360 SMARCA5O60264 1052 aaPredicted RBP27.11■■□□□ 1.93
RNF39-201ENST00000244360 MCM4P33991 863 aa27.11■■□□□ 1.93
RNF39-201ENST00000244360 HDGFL1Q5TGJ6 251 aa27.11■■□□□ 1.93
RNF39-201ENST00000244360 EIF4A1P60842 406 aaKnown RBP27.1■■□□□ 1.93
RNF39-201ENST00000244360 NECTIN2Q92692 538 aa27.1■■□□□ 1.93
RNF39-201ENST00000244360 LRRC59Q96AG4 307 aaKnown RBP27.1■■□□□ 1.93
RNF39-201ENST00000244360 OSBPL3Q9H4L5 887 aa27.1■■□□□ 1.93
RNF39-201ENST00000244360 LGR6Q9HBX8 967 aa27.1■■□□□ 1.93
RNF39-201ENST00000244360 AMOTQ4VCS5 1084 aa27.09■■□□□ 1.93
RNF39-201ENST00000244360 PLEKHO1Q53GL0 409 aaPredicted RBP27.09■■□□□ 1.93
RNF39-201ENST00000244360 LMTK3Q96Q04 1460 aa27.09■■□□□ 1.93
RNF39-201ENST00000244360 DDIT3P35638 169 aa27.08■■□□□ 1.93
RNF39-201ENST00000244360 XPCQ01831 940 aaPredicted RBP27.08■■□□□ 1.92
RNF39-201ENST00000244360 ZNF530Q6P9A1 599 aaPredicted RBP27.08■■□□□ 1.92
RNF39-201ENST00000244360 PROSER2Q86WR7 435 aaPredicted RBP27.08■■□□□ 1.92
RNF39-201ENST00000244360 ZBTB7CA1YPR0 619 aa27.07■■□□□ 1.92
RNF39-201ENST00000244360 ATP8B2P98198 1209 aa27.07■■□□□ 1.92
RNF39-201ENST00000244360 CHMP4AQ9BY43 222 aa27.07■■□□□ 1.92
RNF39-201ENST00000244360 PXDNQ92626 1479 aa27.07■■□□□ 1.92
RNF39-201ENST00000244360 SDSP20132 328 aa27.06■■□□□ 1.92
RNF39-201ENST00000244360 KRT28Q7Z3Y7 464 aa27.06■■□□□ 1.92
RNF39-201ENST00000244360 FAM43AQ8N2R8 423 aa27.06■■□□□ 1.92
RNF39-201ENST00000244360 SPRYD3Q8NCJ5 442 aa27.06■■□□□ 1.92
RNF39-201ENST00000244360 ANKRD24Q8TF21 1146 aa27.05■■□□□ 1.92
RNF39-201ENST00000244360 C19orf44Q9H6X5 657 aa27.05■■□□□ 1.92
RNF39-201ENST00000244360 ALS2Q96Q42 1657 aa27.05■■□□□ 1.92
RNF39-201ENST00000244360 APBB1O00213 710 aa27.05■■□□□ 1.92
RNF39-201ENST00000244360 USP44Q9H0E7 712 aa27.04■■□□□ 1.92
RNF39-201ENST00000244360 SALL3Q9BXA9 1300 aa27.04■■□□□ 1.92
RNF39-201ENST00000244360 IBTKQ9P2D0 1353 aaPredicted RBP27.03■■□□□ 1.92
RNF39-201ENST00000244360 DDX11L8A8MPP1 907 aa27.03■■□□□ 1.92
RNF39-201ENST00000244360 PHAXQ9H814 394 aaKnown RBP27.03■■□□□ 1.92
RNF39-201ENST00000244360 CIZ1Q9ULV3 898 aaPredicted RBP27.03■■□□□ 1.92
RNF39-201ENST00000244360 PDE1AP54750 535 aa27.02■■□□□ 1.92
RNF39-201ENST00000244360 TEFQ10587 303 aa27.02■■□□□ 1.92
RNF39-201ENST00000244360 PNMA6EA0A0J9YXQ4 647 aa27.02■■□□□ 1.92
RNF39-201ENST00000244360 ADAMTS7Q9UKP4 1686 aa27.01■■□□□ 1.91
RNF39-201ENST00000244360 RNMTO43148 476 aaKnown RBP27.01■■□□□ 1.91
RNF39-201ENST00000244360 LRRFIP2Q9Y608 721 aaKnown RBP27.01■■□□□ 1.91
RNF39-201ENST00000244360 EXOC6BQ9Y2D4 811 aa27.01■■□□□ 1.91
RNF39-201ENST00000244360 USP26Q9BXU7 913 aa27■■□□□ 1.91
RNF39-201ENST00000244360 LRRCC1Q9C099 1032 aa27■■□□□ 1.91
RNF39-201ENST00000244360 BTBD11A6QL63 1104 aa27■■□□□ 1.91
RNF39-201ENST00000244360 KCNQ3O43525 872 aa27■■□□□ 1.91
RNF39-201ENST00000244360 CASC1Q6TDU7 716 aa27■■□□□ 1.91
RNF39-201ENST00000244360 MPRIPQ6WCQ1 1025 aa27■■□□□ 1.91
RNF39-201ENST00000244360 AXIN2Q9Y2T1 843 aa27■■□□□ 1.91
RNF39-201ENST00000244360 TUBGCP6Q96RT7 1819 aa26.99■■□□□ 1.91
RNF39-201ENST00000244360 UBTFL1P0CB47 393 aaPredicted RBP26.99■■□□□ 1.91
RNF39-201ENST00000244360 C1orf141Q5JVX7 400 aa26.99■■□□□ 1.91
RNF39-201ENST00000244360 DCCP43146 1447 aa26.99■■□□□ 1.91
RNF39-201ENST00000244360 HEG1Q9ULI3 1381 aa26.99■■□□□ 1.91
RNF39-201ENST00000244360 CD2BP2O95400 341 aaKnown RBP26.98■■□□□ 1.91
RNF39-201ENST00000244360 HSP90AB1P08238 724 aaKnown RBP26.98■■□□□ 1.91
RNF39-201ENST00000244360 LMOD2Q6P5Q4 547 aa26.98■■□□□ 1.91
RNF39-201ENST00000244360 CHPF2Q9P2E5 772 aa26.98■■□□□ 1.91
RNF39-201ENST00000244360 SIPA1L3O60292 1781 aaPredicted RBP26.97■■□□□ 1.91
RNF39-201ENST00000244360 GOLGA6L3A6NEY3 463 aa26.97■■□□□ 1.91
RNF39-201ENST00000244360 K7ELQ4 463 aaPredicted RBP26.97■■□□□ 1.91
RNF39-201ENST00000244360 SRCIN1Q9C0H9 1055 aa26.97■■□□□ 1.91
RNF39-201ENST00000244360 FSD2A1L4K1 749 aa26.97■■□□□ 1.91
RNF39-201ENST00000244360 EIF2S2P20042 333 aaKnown RBP26.97■■□□□ 1.91
RNF39-201ENST00000244360 SSH3Q8TE77 659 aa26.97■■□□□ 1.91
RNF39-201ENST00000244360 RABEP1Q15276 862 aa26.96■■□□□ 1.91
RNF39-201ENST00000244360 RBM42Q9BTD8 480 aaKnown RBP26.96■■□□□ 1.91
RNF39-201ENST00000244360 ERBB3P21860 1342 aa26.96■■□□□ 1.91
RNF39-201ENST00000244360 TRAK2O60296 914 aa26.96■■□□□ 1.91
RNF39-201ENST00000244360 STAP2Q9UGK3 403 aa26.94■■□□□ 1.9
RNF39-201ENST00000244360 PTMSP20962 102 aa26.94■■□□□ 1.9
RNF39-201ENST00000244360 BEND3Q5T5X7 828 aa26.94■■□□□ 1.9
RNF39-201ENST00000244360 DNAAF4Q8WXU2 420 aa26.94■■□□□ 1.9
RNF39-201ENST00000244360 RGPD5Q99666 1765 aa26.94■■□□□ 1.9
RNF39-201ENST00000244360 POLA2Q14181 598 aa26.93■■□□□ 1.9
RNF39-201ENST00000244360 ISY1Q9ULR0 285 aaKnown RBP26.93■■□□□ 1.9
RNF39-201ENST00000244360 REC8O95072 547 aa26.93■■□□□ 1.9
RNF39-201ENST00000244360 ABCC6O95255 1503 aa26.93■■□□□ 1.9
RNF39-201ENST00000244360 ADCY9O60503 1353 aa26.92■■□□□ 1.9
RNF39-201ENST00000244360 TMEM94Q12767 1356 aa26.92■■□□□ 1.9
RNF39-201ENST00000244360 MX1P20591 662 aa26.92■■□□□ 1.9
RNF39-201ENST00000244360 STRCP1A6NGW2 1772 aa26.92■■□□□ 1.9
RNF39-201ENST00000244360 DBF4Q9UBU7 674 aaPredicted RBP26.92■■□□□ 1.9
RNF39-201ENST00000244360 AOX1Q06278 1338 aa26.91■■□□□ 1.9
RNF39-201ENST00000244360 ERC2O15083 957 aa26.91■■□□□ 1.9
RNF39-201ENST00000244360 PI4KAP2A4QPH2 592 aa26.9■■□□□ 1.9
RNF39-201ENST00000244360 GIGYF1O75420 1035 aaPredicted RBP26.9■■□□□ 1.9
RNF39-201ENST00000244360 PI4KAP1Q8N8J0 262 aa26.9■■□□□ 1.9
RNF39-201ENST00000244360 GBP4Q96PP9 640 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms