RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 BRD1O95696 1058 aa17.03■□□□□ 0.32
PCDHB3-201ENST00000231130 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
PCDHB3-201ENST00000231130 COG3Q96JB2 828 aa17.03■□□□□ 0.32
PCDHB3-201ENST00000231130 COL3A1P02461 1466 aaPredicted RBP17.03■□□□□ 0.32
PCDHB3-201ENST00000231130 NRXN1Q9ULB1 1477 aa17.03■□□□□ 0.32
PCDHB3-201ENST00000231130 DIAPH3Q9NSV4 1193 aa17.03■□□□□ 0.32
PCDHB3-201ENST00000231130 PPRC1Q5VV67 1664 aaKnown RBP17.02■□□□□ 0.32
PCDHB3-201ENST00000231130 GIMAP6Q6P9H5 292 aa17.02■□□□□ 0.32
PCDHB3-201ENST00000231130 CHD1O14646 1710 aa17.02■□□□□ 0.31
PCDHB3-201ENST00000231130 NPM1P06748 294 aaKnown RBP eCLIP17.02■□□□□ 0.31
PCDHB3-201ENST00000231130 UNC5CLQ8IV45 518 aa17.02■□□□□ 0.31
PCDHB3-201ENST00000231130 PIBF1Q8WXW3 757 aa17.02■□□□□ 0.31
PCDHB3-201ENST00000231130 ESYT1Q9BSJ8 1104 aa17.02■□□□□ 0.31
PCDHB3-201ENST00000231130 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.01■□□□□ 0.31
PCDHB3-201ENST00000231130 CPA1P15085 419 aa17.01■□□□□ 0.31
PCDHB3-201ENST00000231130 IRX5P78411 483 aaPredicted RBP17.01■□□□□ 0.31
PCDHB3-201ENST00000231130 NUTM1Q86Y26 1132 aa17.01■□□□□ 0.31
PCDHB3-201ENST00000231130 ZBTB9Q96C00 473 aa17.01■□□□□ 0.31
PCDHB3-201ENST00000231130 PUS7Q96PZ0 661 aaKnown RBP17.01■□□□□ 0.31
PCDHB3-201ENST00000231130 GLI2P10070 1586 aa17.01■□□□□ 0.31
PCDHB3-201ENST00000231130 FAM135BQ49AJ0 1406 aa17.01■□□□□ 0.31
PCDHB3-201ENST00000231130 FOXO3O43524 673 aa17■□□□□ 0.31
PCDHB3-201ENST00000231130 RTL1A6NKG5 1358 aa17■□□□□ 0.31
PCDHB3-201ENST00000231130 TNNT3P45378 269 aaPredicted RBP17■□□□□ 0.31
PCDHB3-201ENST00000231130 ADGRB3O60242 1522 aa16.99■□□□□ 0.31
PCDHB3-201ENST00000231130 CCDC66A2RUB6 948 aa16.99■□□□□ 0.31
PCDHB3-201ENST00000231130 FKBP5Q13451 457 aaPredicted RBP16.99■□□□□ 0.31
PCDHB3-201ENST00000231130 PHF14O94880 888 aa16.99■□□□□ 0.31
PCDHB3-201ENST00000231130 MX1P20591 662 aa16.99■□□□□ 0.31
PCDHB3-201ENST00000231130 PIK3R4Q99570 1358 aa16.99■□□□□ 0.31
PCDHB3-201ENST00000231130 SRCIN1Q9C0H9 1055 aa16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 MYO3AQ8NEV4 1616 aa16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 PNPLA6Q8IY17 1366 aa16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 DEPDC5O75140 1603 aa16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 ZFP91Q96JP5 570 aaPredicted RBP16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 TRIM34Q9BYJ4 488 aa16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 LRRCC1Q9C099 1032 aa16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 IL25Q9H293 177 aa16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 YTHDC2Q9H6S0 1430 aaKnown RBP16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 RIMS2Q9UQ26 1411 aa16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 TXNDC2Q86VQ3 553 aa16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 ZNF592Q92610 1267 aa16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 SETBP1Q9Y6X0 1596 aa16.98■□□□□ 0.31
PCDHB3-201ENST00000231130 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
PCDHB3-201ENST00000231130 VWDEQ8N2E2 1590 aa16.97■□□□□ 0.31
PCDHB3-201ENST00000231130 MROH1Q8NDA8 1641 aa16.97■□□□□ 0.31
PCDHB3-201ENST00000231130 TIGD1Q96MW7 591 aa16.97■□□□□ 0.31
PCDHB3-201ENST00000231130 VPS37CA5D8V6 355 aaPredicted RBP16.96■□□□□ 0.31
PCDHB3-201ENST00000231130 CHMLP26374 656 aa16.96■□□□□ 0.31
PCDHB3-201ENST00000231130 MLECQ14165 292 aa16.96■□□□□ 0.31
PCDHB3-201ENST00000231130 GNAI2P04899 355 aa16.96■□□□□ 0.31
PCDHB3-201ENST00000231130 CAMK4Q16566 473 aa16.95■□□□□ 0.3
PCDHB3-201ENST00000231130 WDR33Q9C0J8 1336 aaKnown RBP16.95■□□□□ 0.3
PCDHB3-201ENST00000231130 OGFRQ9NZT2 677 aa16.95■□□□□ 0.3
PCDHB3-201ENST00000231130 ATP10DQ9P241 1426 aa16.95■□□□□ 0.3
PCDHB3-201ENST00000231130 NPHP1O15259 732 aa16.95■□□□□ 0.3
PCDHB3-201ENST00000231130 DRC7Q8IY82 874 aa16.95■□□□□ 0.3
PCDHB3-201ENST00000231130 RTF1Q92541 710 aaKnown RBP16.95■□□□□ 0.3
PCDHB3-201ENST00000231130 SPG7Q9UQ90 795 aa16.95■□□□□ 0.3
PCDHB3-201ENST00000231130 MCM2P49736 904 aa16.94■□□□□ 0.3
PCDHB3-201ENST00000231130 HSP90AB2PQ58FF8 381 aa16.94■□□□□ 0.3
PCDHB3-201ENST00000231130 FERMT3Q86UX7 667 aa16.94■□□□□ 0.3
PCDHB3-201ENST00000231130 CAMSAP1Q5T5Y3 1602 aa16.94■□□□□ 0.3
PCDHB3-201ENST00000231130 IRX3P78415 501 aaPredicted RBP16.94■□□□□ 0.3
PCDHB3-201ENST00000231130 NAA30Q147X3 362 aaPredicted RBP16.94■□□□□ 0.3
PCDHB3-201ENST00000231130 STK31Q9BXU1 1019 aa16.94■□□□□ 0.3
PCDHB3-201ENST00000231130 CWC27Q6UX04 472 aaKnown RBP16.93■□□□□ 0.3
PCDHB3-201ENST00000231130 SMC3Q9UQE7 1217 aa16.93■□□□□ 0.3
PCDHB3-201ENST00000231130 LRRFIP2Q9Y608 721 aaKnown RBP16.93■□□□□ 0.3
PCDHB3-201ENST00000231130 CD163L1Q9NR16 1453 aa16.93■□□□□ 0.3
PCDHB3-201ENST00000231130 CCDC183Q5T5S1 534 aa16.93■□□□□ 0.3
PCDHB3-201ENST00000231130 DNAJC2Q99543 621 aaKnown RBP16.93■□□□□ 0.3
PCDHB3-201ENST00000231130 CCDC83Q8IWF9 413 aa16.92■□□□□ 0.3
PCDHB3-201ENST00000231130 DNM1Q05193 864 aaKnown RBP16.92■□□□□ 0.3
PCDHB3-201ENST00000231130 EIF4A2Q14240 407 aaKnown RBP16.92■□□□□ 0.3
PCDHB3-201ENST00000231130 FAM173BQ6P4H8 233 aa16.92■□□□□ 0.3
PCDHB3-201ENST00000231130 C16orf45Q96MC5 204 aaPredicted RBP16.92■□□□□ 0.3
PCDHB3-201ENST00000231130 FEZ1Q99689 392 aa16.92■□□□□ 0.3
PCDHB3-201ENST00000231130 PYCARDQ9ULZ3 195 aa16.92■□□□□ 0.3
PCDHB3-201ENST00000231130 CUL4AQ13619 759 aa16.92■□□□□ 0.3
PCDHB3-201ENST00000231130 IFT172Q9UG01 1749 aa16.92■□□□□ 0.3
PCDHB3-201ENST00000231130 SURF6O75683 361 aaKnown RBP16.91■□□□□ 0.3
PCDHB3-201ENST00000231130 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCDHB3-201ENST00000231130 V9GYY5 206 aaPredicted RBP16.91■□□□□ 0.3
PCDHB3-201ENST00000231130 INO80Q9ULG1 1556 aaPredicted RBP16.91■□□□□ 0.3
PCDHB3-201ENST00000231130 SYT1P21579 422 aa16.91■□□□□ 0.3
PCDHB3-201ENST00000231130 CHL1O00533 1208 aa16.91■□□□□ 0.3
PCDHB3-201ENST00000231130 GTF2F1P35269 517 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCDHB3-201ENST00000231130 HAP1P54257 671 aaPredicted RBP16.91■□□□□ 0.3
PCDHB3-201ENST00000231130 USP32Q8NFA0 1604 aa16.9■□□□□ 0.3
PCDHB3-201ENST00000231130 NUDT16Q96DE0 195 aaKnown RBP16.9■□□□□ 0.3
PCDHB3-201ENST00000231130 STX6O43752 255 aa16.9■□□□□ 0.3
PCDHB3-201ENST00000231130 AK2P54819 239 aa16.9■□□□□ 0.3
PCDHB3-201ENST00000231130 CKAP2LQ8IYA6 745 aa16.9■□□□□ 0.3
PCDHB3-201ENST00000231130 ZFYVE9O95405 1425 aa16.9■□□□□ 0.3
PCDHB3-201ENST00000231130 PPLO60437 1756 aa16.9■□□□□ 0.3
PCDHB3-201ENST00000231130 TCHHQ07283 1943 aa16.89■□□□□ 0.3
PCDHB3-201ENST00000231130 ZC3H13Q5T200 1668 aaKnown RBP16.89■□□□□ 0.3
PCDHB3-201ENST00000231130 KNDC1Q76NI1 1749 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms