RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PDE1AP54750 535 aa20.02■□□□□ 0.8
LTBR-201ENST00000228918 STK31Q9BXU1 1019 aa20.02■□□□□ 0.8
LTBR-201ENST00000228918 ERC2O15083 957 aa20.01■□□□□ 0.79
LTBR-201ENST00000228918 CYP2E1P05181 493 aaPredicted RBP20.01■□□□□ 0.79
LTBR-201ENST00000228918 CEBPAP49715 358 aaPredicted RBP20.01■□□□□ 0.79
LTBR-201ENST00000228918 SALL3Q9BXA9 1300 aa20■□□□□ 0.79
LTBR-201ENST00000228918 ST18O60284 1047 aa20■□□□□ 0.79
LTBR-201ENST00000228918 NUCB2P80303 420 aa20■□□□□ 0.79
LTBR-201ENST00000228918 FLIIQ13045 1269 aa20■□□□□ 0.79
LTBR-201ENST00000228918 KLHL40Q2TBA0 621 aa19.99■□□□□ 0.79
LTBR-201ENST00000228918 ANKARQ7Z5J8 1434 aa19.99■□□□□ 0.79
LTBR-201ENST00000228918 EXOC6BQ9Y2D4 811 aa19.99■□□□□ 0.79
LTBR-201ENST00000228918 IBTKQ9P2D0 1353 aaPredicted RBP19.98■□□□□ 0.79
LTBR-201ENST00000228918 GNAT3A8MTJ3 354 aa19.98■□□□□ 0.79
LTBR-201ENST00000228918 CCDC30Q5VVM6 783 aa19.98■□□□□ 0.79
LTBR-201ENST00000228918 CWC22Q9HCG8 908 aaKnown RBP19.97■□□□□ 0.79
LTBR-201ENST00000228918 PXDNLA1KZ92 1463 aa19.97■□□□□ 0.79
LTBR-201ENST00000228918 GNAI3P08754 354 aa19.97■□□□□ 0.79
LTBR-201ENST00000228918 HOXC9P31274 260 aa19.97■□□□□ 0.79
LTBR-201ENST00000228918 FKBP5Q13451 457 aaPredicted RBP19.97■□□□□ 0.79
LTBR-201ENST00000228918 MAP3K5Q99683 1374 aa19.97■□□□□ 0.79
LTBR-201ENST00000228918 SOS1Q07889 1333 aaPredicted RBP19.96■□□□□ 0.79
LTBR-201ENST00000228918 NLRP6P59044 892 aa19.96■□□□□ 0.79
LTBR-201ENST00000228918 LRRCC1Q9C099 1032 aa19.96■□□□□ 0.79
LTBR-201ENST00000228918 CLCN1P35523 988 aa19.95■□□□□ 0.78
LTBR-201ENST00000228918 DDX49Q9Y6V7 483 aaKnown RBP19.95■□□□□ 0.78
LTBR-201ENST00000228918 PNMA6EA0A0J9YXQ4 647 aa19.95■□□□□ 0.78
LTBR-201ENST00000228918 ATP8B2P98198 1209 aa19.95■□□□□ 0.78
LTBR-201ENST00000228918 PKP1Q13835 747 aa19.95■□□□□ 0.78
LTBR-201ENST00000228918 TSHZ3Q63HK5 1081 aa19.93■□□□□ 0.78
LTBR-201ENST00000228918 ZGPATQ8N5A5 531 aaKnown RBP19.93■□□□□ 0.78
LTBR-201ENST00000228918 IL17REQ8NFR9 667 aa19.93■□□□□ 0.78
LTBR-201ENST00000228918 BABAM1Q9NWV8 329 aa19.93■□□□□ 0.78
LTBR-201ENST00000228918 MX1P20591 662 aa19.93■□□□□ 0.78
LTBR-201ENST00000228918 MCTP1Q6DN14 999 aa19.93■□□□□ 0.78
LTBR-201ENST00000228918 ESYT1Q9BSJ8 1104 aa19.92■□□□□ 0.78
LTBR-201ENST00000228918 FER1L4A9Z1Z3 1794 aa19.92■□□□□ 0.78
LTBR-201ENST00000228918 NECTIN2Q92692 538 aa19.92■□□□□ 0.78
LTBR-201ENST00000228918 LMBRD1Q9NUN5 540 aa19.91■□□□□ 0.78
LTBR-201ENST00000228918 TAF7Q15545 349 aaPredicted RBP19.91■□□□□ 0.78
LTBR-201ENST00000228918 LRRFIP2Q9Y608 721 aaKnown RBP19.91■□□□□ 0.78
LTBR-201ENST00000228918 LTN1O94822 1766 aa19.9■□□□□ 0.78
LTBR-201ENST00000228918 NUTM2GQ5VZR2 741 aa19.9■□□□□ 0.78
LTBR-201ENST00000228918 STAP2Q9UGK3 403 aa19.9■□□□□ 0.78
LTBR-201ENST00000228918 ZDHHC9Q9Y397 364 aa19.9■□□□□ 0.78
LTBR-201ENST00000228918 THEMISQ8N1K5 641 aaPredicted RBP19.89■□□□□ 0.77
LTBR-201ENST00000228918 SRCIN1Q9C0H9 1055 aa19.88■□□□□ 0.77
LTBR-201ENST00000228918 USP44Q9H0E7 712 aa19.88■□□□□ 0.77
LTBR-201ENST00000228918 MED1Q15648 1581 aaPredicted RBP19.88■□□□□ 0.77
LTBR-201ENST00000228918 ESPNB1AK53 854 aa19.88■□□□□ 0.77
LTBR-201ENST00000228918 CHMLP26374 656 aa19.88■□□□□ 0.77
LTBR-201ENST00000228918 ZNF445P59923 1031 aa19.88■□□□□ 0.77
LTBR-201ENST00000228918 KCNA6P17658 529 aa19.87■□□□□ 0.77
LTBR-201ENST00000228918 NEK4P51957 841 aa19.87■□□□□ 0.77
LTBR-201ENST00000228918 ABTB2Q8N961 1025 aa19.87■□□□□ 0.77
LTBR-201ENST00000228918 AOX1Q06278 1338 aa19.87■□□□□ 0.77
LTBR-201ENST00000228918 ERBB4Q15303 1308 aa19.87■□□□□ 0.77
LTBR-201ENST00000228918 GLIPR1L2Q4G1C9 344 aa19.87■□□□□ 0.77
LTBR-201ENST00000228918 LTV1Q96GA3 475 aaPredicted RBP19.87■□□□□ 0.77
LTBR-201ENST00000228918 UBTFL1P0CB47 393 aaPredicted RBP19.86■□□□□ 0.77
LTBR-201ENST00000228918 MCCP23508 829 aa19.86■□□□□ 0.77
LTBR-201ENST00000228918 NASPP49321 788 aaPredicted RBP19.86■□□□□ 0.77
LTBR-201ENST00000228918 MCM2P49736 904 aa19.86■□□□□ 0.77
LTBR-201ENST00000228918 ANAPC15P60006 121 aa19.86■□□□□ 0.77
LTBR-201ENST00000228918 HDGFL1Q5TGJ6 251 aa19.86■□□□□ 0.77
LTBR-201ENST00000228918 TRIM44Q96DX7 344 aaPredicted RBP19.86■□□□□ 0.77
LTBR-201ENST00000228918 TMX3Q96JJ7 454 aa19.86■□□□□ 0.77
LTBR-201ENST00000228918 PKNOX2Q96KN3 472 aa19.86■□□□□ 0.77
LTBR-201ENST00000228918 TRIM6-TRIM34B2RNG4 842 aa19.86■□□□□ 0.77
LTBR-201ENST00000228918 SSH3Q8TE77 659 aa19.86■□□□□ 0.77
LTBR-201ENST00000228918 PALD1Q9ULE6 856 aa19.86■□□□□ 0.77
LTBR-201ENST00000228918 KDM3BQ7LBC6 1761 aa19.85■□□□□ 0.77
LTBR-201ENST00000228918 CEMIPQ8WUJ3 1361 aa19.85■□□□□ 0.77
LTBR-201ENST00000228918 CCDC173Q0VFZ6 552 aa19.85■□□□□ 0.77
LTBR-201ENST00000228918 CAVIN1Q6NZI2 390 aaKnown RBP19.85■□□□□ 0.77
LTBR-201ENST00000228918 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
LTBR-201ENST00000228918 RILPL2Q969X0 211 aa19.85■□□□□ 0.77
LTBR-201ENST00000228918 IL17RAQ96F46 866 aa19.85■□□□□ 0.77
LTBR-201ENST00000228918 ZSCAN23Q3MJ62 389 aa19.85■□□□□ 0.77
LTBR-201ENST00000228918 PPP1R9BQ96SB3 815 aa19.85■□□□□ 0.77
LTBR-201ENST00000228918 ANO2Q9NQ90 1003 aa19.85■□□□□ 0.77
LTBR-201ENST00000228918 USHBP1Q8N6Y0 703 aa19.84■□□□□ 0.77
LTBR-201ENST00000228918 PHAXQ9H814 394 aaKnown RBP19.84■□□□□ 0.77
LTBR-201ENST00000228918 CUL4AQ13619 759 aa19.83■□□□□ 0.77
LTBR-201ENST00000228918 UNC5CLQ8IV45 518 aa19.83■□□□□ 0.77
LTBR-201ENST00000228918 NFAT5O94916 1531 aa19.83■□□□□ 0.76
LTBR-201ENST00000228918 PRPF40AO75400 957 aaKnown RBP19.82■□□□□ 0.76
LTBR-201ENST00000228918 NCLP19338 710 aaKnown RBP19.82■□□□□ 0.76
LTBR-201ENST00000228918 GPT2Q8TD30 523 aa19.82■□□□□ 0.76
LTBR-201ENST00000228918 POLA2Q14181 598 aa19.82■□□□□ 0.76
LTBR-201ENST00000228918 RAB11FIP3O75154 756 aa19.81■□□□□ 0.76
LTBR-201ENST00000228918 IL1RAPL2Q9NP60 686 aa19.81■□□□□ 0.76
LTBR-201ENST00000228918 EPB41L2O43491 1005 aaKnown RBP19.81■□□□□ 0.76
LTBR-201ENST00000228918 PPP1R42Q7Z4L9 355 aa19.8■□□□□ 0.76
LTBR-201ENST00000228918 INTS4Q96HW7 963 aaKnown RBP19.8■□□□□ 0.76
LTBR-201ENST00000228918 LMO7Q8WWI1 1683 aa19.8■□□□□ 0.76
LTBR-201ENST00000228918 IP6K1Q92551 441 aa19.79■□□□□ 0.76
LTBR-201ENST00000228918 BRD1O95696 1058 aa19.79■□□□□ 0.76
LTBR-201ENST00000228918 HOXB7P09629 217 aa19.79■□□□□ 0.76
LTBR-201ENST00000228918 EIF4A1P60842 406 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms