RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 EN1Q05925 392 aaPredicted RBP26.1■■□□□ 1.77
HOXA6-201ENST00000222728 NFATC2IPQ8NCF5 419 aa26.1■■□□□ 1.77
HOXA6-201ENST00000222728 BAG6P46379 1132 aa26.09■■□□□ 1.77
HOXA6-201ENST00000222728 THUMPD2Q9BTF0 503 aaKnown RBP26.09■■□□□ 1.77
HOXA6-201ENST00000222728 SLC52A2Q9HAB3 445 aa26.09■■□□□ 1.77
HOXA6-201ENST00000222728 PAPPAQ13219 1627 aa26.09■■□□□ 1.77
HOXA6-201ENST00000222728 RREB1Q92766 1687 aa26.09■■□□□ 1.77
HOXA6-201ENST00000222728 CEMIPQ8WUJ3 1361 aa26.08■■□□□ 1.77
HOXA6-201ENST00000222728 HTATSF1O43719 755 aaKnown RBP26.07■■□□□ 1.76
HOXA6-201ENST00000222728 TEFQ10587 303 aa26.06■■□□□ 1.76
HOXA6-201ENST00000222728 ASAP1Q9ULH1 1129 aa26.06■■□□□ 1.76
HOXA6-201ENST00000222728 NUP188Q5SRE5 1749 aa26.05■■□□□ 1.76
HOXA6-201ENST00000222728 EZH2Q15910 746 aaKnown RBP26.05■■□□□ 1.76
HOXA6-201ENST00000222728 TRIM35Q9UPQ4 493 aa26.05■■□□□ 1.76
HOXA6-201ENST00000222728 TAF1LQ8IZX4 1826 aa26.04■■□□□ 1.76
HOXA6-201ENST00000222728 CAMKK2Q96RR4 588 aa26.04■■□□□ 1.76
HOXA6-201ENST00000222728 UBR2Q8IWV8 1755 aa26.04■■□□□ 1.76
HOXA6-201ENST00000222728 PLSCR1O15162 318 aa26.03■■□□□ 1.76
HOXA6-201ENST00000222728 ATG3Q9NT62 314 aa26.03■■□□□ 1.76
HOXA6-201ENST00000222728 PALLDQ8WX93 1383 aa26.03■■□□□ 1.76
HOXA6-201ENST00000222728 KDM3BQ7LBC6 1761 aa26.02■■□□□ 1.76
HOXA6-201ENST00000222728 LMOD3Q0VAK6 560 aa26.02■■□□□ 1.76
HOXA6-201ENST00000222728 SALL2Q9Y467 1007 aaPredicted RBP26.02■■□□□ 1.76
HOXA6-201ENST00000222728 SLC39A6Q13433 755 aa26.01■■□□□ 1.75
HOXA6-201ENST00000222728 KCNQ4P56696 695 aa25.99■■□□□ 1.75
HOXA6-201ENST00000222728 PROM2Q8N271 834 aa25.99■■□□□ 1.75
HOXA6-201ENST00000222728 SMARCC1Q92922 1105 aaPredicted RBP25.99■■□□□ 1.75
HOXA6-201ENST00000222728 C5P01031 1676 aa25.99■■□□□ 1.75
HOXA6-201ENST00000222728 TXNRD1Q16881 649 aa25.98■■□□□ 1.75
HOXA6-201ENST00000222728 BTBD11A6QL63 1104 aa25.97■■□□□ 1.75
HOXA6-201ENST00000222728 MIS18AQ9NYP9 233 aa25.97■■□□□ 1.75
HOXA6-201ENST00000222728 TAF7Q15545 349 aaPredicted RBP25.96■■□□□ 1.75
HOXA6-201ENST00000222728 RBM42Q9BTD8 480 aaKnown RBP25.96■■□□□ 1.75
HOXA6-201ENST00000222728 KCPQ6ZWJ8 1503 aa25.96■■□□□ 1.75
HOXA6-201ENST00000222728 TJP1Q07157 1748 aa25.95■■□□□ 1.74
HOXA6-201ENST00000222728 KCNQ3O43525 872 aa25.95■■□□□ 1.74
HOXA6-201ENST00000222728 PTCD1O75127 700 aaKnown RBP25.95■■□□□ 1.74
HOXA6-201ENST00000222728 LRRC4BQ9NT99 713 aa25.94■■□□□ 1.74
HOXA6-201ENST00000222728 CCNL1Q9UK58 526 aaPredicted RBP25.94■■□□□ 1.74
HOXA6-201ENST00000222728 COL5A3P25940 1745 aaPredicted RBP25.94■■□□□ 1.74
HOXA6-201ENST00000222728 ZNF831Q5JPB2 1677 aa25.93■■□□□ 1.74
HOXA6-201ENST00000222728 LOC102724428A0A0B4J2F2 783 aa25.93■■□□□ 1.74
HOXA6-201ENST00000222728 SIK1P57059 783 aa25.93■■□□□ 1.74
HOXA6-201ENST00000222728 ZNF790Q6PG37 636 aa25.92■■□□□ 1.74
HOXA6-201ENST00000222728 WWC1Q8IX03 1113 aa25.92■■□□□ 1.74
HOXA6-201ENST00000222728 TTC5Q8N0Z6 440 aa25.92■■□□□ 1.74
HOXA6-201ENST00000222728 LAS1LQ9Y4W2 734 aaKnown RBP25.92■■□□□ 1.74
HOXA6-201ENST00000222728 TUBGCP6Q96RT7 1819 aa25.92■■□□□ 1.74
HOXA6-201ENST00000222728 MYH14Q7Z406 1995 aaKnown RBP25.91■■□□□ 1.74
HOXA6-201ENST00000222728 SLC4A9Q96Q91 983 aa25.91■■□□□ 1.74
HOXA6-201ENST00000222728 CCDC27Q2M243 656 aa25.9■■□□□ 1.74
HOXA6-201ENST00000222728 SLC27A3Q5K4L6 730 aa25.9■■□□□ 1.74
HOXA6-201ENST00000222728 ATP6V1AP38606 617 aa25.89■■□□□ 1.74
HOXA6-201ENST00000222728 CICQ96RK0 1608 aaPredicted RBP25.88■■□□□ 1.73
HOXA6-201ENST00000222728 ITPK1Q13572 414 aa25.88■■□□□ 1.73
HOXA6-201ENST00000222728 ZNF496Q96IT1 587 aaPredicted RBP25.88■■□□□ 1.73
HOXA6-201ENST00000222728 TSPYL4Q9UJ04 414 aa25.88■■□□□ 1.73
HOXA6-201ENST00000222728 C4BP0C0L5 1744 aa25.88■■□□□ 1.73
HOXA6-201ENST00000222728 NCBP3Q53F19 620 aaKnown RBP25.86■■□□□ 1.73
HOXA6-201ENST00000222728 ANO8Q9HCE9 1232 aaPredicted RBP25.85■■□□□ 1.73
HOXA6-201ENST00000222728 UBR3Q6ZT12 1888 aa25.85■■□□□ 1.73
HOXA6-201ENST00000222728 LAMB4A4D0S4 1761 aa25.84■■□□□ 1.73
HOXA6-201ENST00000222728 CHL1O00533 1208 aa25.84■■□□□ 1.73
HOXA6-201ENST00000222728 CALD1Q05682 793 aaKnown RBP25.84■■□□□ 1.73
HOXA6-201ENST00000222728 LINC00116Q8NCU8 138 aa25.84■■□□□ 1.73
HOXA6-201ENST00000222728 FMNL2Q96PY5 1086 aa25.84■■□□□ 1.73
HOXA6-201ENST00000222728 HEG1Q9ULI3 1381 aa25.83■■□□□ 1.73
HOXA6-201ENST00000222728 DNAJC10Q8IXB1 793 aa25.83■■□□□ 1.73
HOXA6-201ENST00000222728 NGEFQ8N5V2 710 aa25.83■■□□□ 1.73
HOXA6-201ENST00000222728 CFAP44Q96MT7 982 aa25.82■■□□□ 1.72
HOXA6-201ENST00000222728 IFT57Q9NWB7 429 aa25.82■■□□□ 1.72
HOXA6-201ENST00000222728 ZNF853P0CG23 659 aa25.81■■□□□ 1.72
HOXA6-201ENST00000222728 ZNF827Q17R98 1081 aa25.81■■□□□ 1.72
HOXA6-201ENST00000222728 MBIPQ9NS73 344 aa25.81■■□□□ 1.72
HOXA6-201ENST00000222728 PRAMEF22A3QJZ6 481 aa25.8■■□□□ 1.72
HOXA6-201ENST00000222728 EIF4A1P60842 406 aaKnown RBP25.8■■□□□ 1.72
HOXA6-201ENST00000222728 GNAI1P63096 354 aa25.8■■□□□ 1.72
HOXA6-201ENST00000222728 HNRNPUQ00839 825 aaKnown RBP eCLIP25.8■■□□□ 1.72
HOXA6-201ENST00000222728 BABAM1Q9NWV8 329 aa25.8■■□□□ 1.72
HOXA6-201ENST00000222728 QSER1Q2KHR3 1735 aa25.8■■□□□ 1.72
HOXA6-201ENST00000222728 WDR63Q8IWG1 891 aa25.79■■□□□ 1.72
HOXA6-201ENST00000222728 ZNF521Q96K83 1311 aa25.79■■□□□ 1.72
HOXA6-201ENST00000222728 NBPF14Q5TI25 921 aa25.78■■□□□ 1.72
HOXA6-201ENST00000222728 VSIG10Q8N0Z9 540 aa25.78■■□□□ 1.72
HOXA6-201ENST00000222728 TSR2Q969E8 191 aaKnown RBP25.78■■□□□ 1.72
HOXA6-201ENST00000222728 STK32BQ9NY57 414 aa25.78■■□□□ 1.72
HOXA6-201ENST00000222728 KRT24Q2M2I5 525 aa25.77■■□□□ 1.72
HOXA6-201ENST00000222728 AKT1S1Q96B36 256 aa25.77■■□□□ 1.72
HOXA6-201ENST00000222728 SPINK5Q9NQ38 1064 aaPredicted RBP25.77■■□□□ 1.72
HOXA6-201ENST00000222728 IL16Q14005 1332 aa25.77■■□□□ 1.72
HOXA6-201ENST00000222728 PSDA5PKW4 1024 aaPredicted RBP25.75■■□□□ 1.71
HOXA6-201ENST00000222728 SNRPA1P09661 255 aaKnown RBP25.75■■□□□ 1.71
HOXA6-201ENST00000222728 R3HDM1Q15032 1099 aaKnown RBP25.75■■□□□ 1.71
HOXA6-201ENST00000222728 SLC15A2Q16348 729 aa25.75■■□□□ 1.71
HOXA6-201ENST00000222728 CYP19A1P11511 503 aaPredicted RBP25.74■■□□□ 1.71
HOXA6-201ENST00000222728 CRKLP46109 303 aaKnown RBP25.74■■□□□ 1.71
HOXA6-201ENST00000222728 SMIM5Q71RC9 77 aa25.74■■□□□ 1.71
HOXA6-201ENST00000222728 AK7Q96M32 723 aa25.74■■□□□ 1.71
HOXA6-201ENST00000222728 USP16Q9Y5T5 823 aa25.74■■□□□ 1.71
HOXA6-201ENST00000222728 GIGYF1O75420 1035 aaPredicted RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms