RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 MX1P20591 662 aa17.5■□□□□ 0.39
PTPRA-201ENST00000216877 FBXO38Q6PIJ6 1188 aa17.5■□□□□ 0.39
PTPRA-201ENST00000216877 CKAP2LQ8IYA6 745 aa17.5■□□□□ 0.39
PTPRA-201ENST00000216877 LUZP1Q86V48 1076 aa17.5■□□□□ 0.39
PTPRA-201ENST00000216877 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
PTPRA-201ENST00000216877 PTPN14Q15678 1187 aa17.49■□□□□ 0.39
PTPRA-201ENST00000216877 FILIP1Q7Z7B0 1213 aa17.49■□□□□ 0.39
PTPRA-201ENST00000216877 PPLO60437 1756 aa17.49■□□□□ 0.39
PTPRA-201ENST00000216877 DRC1Q96MC2 740 aa17.49■□□□□ 0.39
PTPRA-201ENST00000216877 CARD14Q9BXL6 1004 aa17.49■□□□□ 0.39
PTPRA-201ENST00000216877 PTPRTO14522 1441 aa17.48■□□□□ 0.39
PTPRA-201ENST00000216877 RILPL2Q969X0 211 aa17.48■□□□□ 0.39
PTPRA-201ENST00000216877 PAXBP1Q9Y5B6 917 aa17.48■□□□□ 0.39
PTPRA-201ENST00000216877 MCCP23508 829 aa17.48■□□□□ 0.39
PTPRA-201ENST00000216877 AP5Z1O43299 807 aa17.48■□□□□ 0.39
PTPRA-201ENST00000216877 BRD1O95696 1058 aa17.48■□□□□ 0.39
PTPRA-201ENST00000216877 CCDC192P0DO97 292 aa17.48■□□□□ 0.39
PTPRA-201ENST00000216877 SYT10Q6XYQ8 523 aa17.48■□□□□ 0.39
PTPRA-201ENST00000216877 FBXW7Q969H0 707 aa17.48■□□□□ 0.39
PTPRA-201ENST00000216877 SDSP20132 328 aa17.47■□□□□ 0.39
PTPRA-201ENST00000216877 EFCAB6Q5THR3 1501 aa17.47■□□□□ 0.39
PTPRA-201ENST00000216877 BMS1Q14692 1282 aaKnown RBP17.47■□□□□ 0.39
PTPRA-201ENST00000216877 LRRFIP2Q9Y608 721 aaKnown RBP17.47■□□□□ 0.39
PTPRA-201ENST00000216877 MYOM1P52179 1685 aa17.47■□□□□ 0.39
PTPRA-201ENST00000216877 VPS37CA5D8V6 355 aaPredicted RBP17.47■□□□□ 0.39
PTPRA-201ENST00000216877 TSHZ3Q63HK5 1081 aa17.47■□□□□ 0.39
PTPRA-201ENST00000216877 EP400NLQ6ZTU2 488 aa17.47■□□□□ 0.39
PTPRA-201ENST00000216877 SETD1AO15047 1707 aaKnown RBP17.46■□□□□ 0.39
PTPRA-201ENST00000216877 RAPGEF3O95398 923 aa17.46■□□□□ 0.39
PTPRA-201ENST00000216877 WDR33Q9C0J8 1336 aaKnown RBP17.46■□□□□ 0.39
PTPRA-201ENST00000216877 PIK3C2GO75747 1445 aa17.46■□□□□ 0.39
PTPRA-201ENST00000216877 PATL2C9JE40 543 aaKnown RBP17.46■□□□□ 0.39
PTPRA-201ENST00000216877 FAM69CQ0P6D2 419 aa17.46■□□□□ 0.39
PTPRA-201ENST00000216877 PLEKHM2Q8IWE5 1019 aa17.46■□□□□ 0.39
PTPRA-201ENST00000216877 FANCAO15360 1455 aa17.46■□□□□ 0.39
PTPRA-201ENST00000216877 GPS2Q13227 327 aa17.46■□□□□ 0.39
PTPRA-201ENST00000216877 CAMSAP1Q5T5Y3 1602 aa17.46■□□□□ 0.39
PTPRA-201ENST00000216877 GOLGA6L1Q8N7Z2 621 aa17.46■□□□□ 0.39
PTPRA-201ENST00000216877 ERC2O15083 957 aa17.45■□□□□ 0.38
PTPRA-201ENST00000216877 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
PTPRA-201ENST00000216877 ATAD2Q6PL18 1390 aa17.45■□□□□ 0.38
PTPRA-201ENST00000216877 MYO3AQ8NEV4 1616 aa17.45■□□□□ 0.38
PTPRA-201ENST00000216877 MLH3Q9UHC1 1453 aa17.44■□□□□ 0.38
PTPRA-201ENST00000216877 BRD2P25440 801 aaKnown RBP17.44■□□□□ 0.38
PTPRA-201ENST00000216877 ERCC6LQ2NKX8 1250 aa17.44■□□□□ 0.38
PTPRA-201ENST00000216877 TTC22Q5TAA0 569 aa17.44■□□□□ 0.38
PTPRA-201ENST00000216877 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
PTPRA-201ENST00000216877 SLC20A2Q08357 652 aa17.44■□□□□ 0.38
PTPRA-201ENST00000216877 GNL2Q13823 731 aaKnown RBP17.44■□□□□ 0.38
PTPRA-201ENST00000216877 CLIP2Q9UDT6 1046 aa17.44■□□□□ 0.38
PTPRA-201ENST00000216877 TRAK1Q9UPV9 953 aa17.44■□□□□ 0.38
PTPRA-201ENST00000216877 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.44■□□□□ 0.38
PTPRA-201ENST00000216877 SRCIN1Q9C0H9 1055 aa17.44■□□□□ 0.38
PTPRA-201ENST00000216877 MYO5BQ9ULV0 1848 aa17.43■□□□□ 0.38
PTPRA-201ENST00000216877 SOX12O15370 315 aa17.43■□□□□ 0.38
PTPRA-201ENST00000216877 RBM6P78332 1123 aaKnown RBP17.43■□□□□ 0.38
PTPRA-201ENST00000216877 ZCCHC17Q9NP64 241 aaKnown RBP17.43■□□□□ 0.38
PTPRA-201ENST00000216877 TULP2O00295 520 aa17.43■□□□□ 0.38
PTPRA-201ENST00000216877 NRXN1Q9ULB1 1477 aa17.42■□□□□ 0.38
PTPRA-201ENST00000216877 POGZQ7Z3K3 1410 aa17.42■□□□□ 0.38
PTPRA-201ENST00000216877 PRR29P0C7W0 189 aa17.42■□□□□ 0.38
PTPRA-201ENST00000216877 LMAN1P49257 510 aa17.42■□□□□ 0.38
PTPRA-201ENST00000216877 LMOD3Q0VAK6 560 aa17.42■□□□□ 0.38
PTPRA-201ENST00000216877 KANK1Q14678 1352 aa17.42■□□□□ 0.38
PTPRA-201ENST00000216877 SART3Q15020 963 aaKnown RBP17.42■□□□□ 0.38
PTPRA-201ENST00000216877 HOMER1Q86YM7 354 aa17.42■□□□□ 0.38
PTPRA-201ENST00000216877 SYNMO15061 1565 aa17.41■□□□□ 0.38
PTPRA-201ENST00000216877 ASXL1Q8IXJ9 1541 aa17.41■□□□□ 0.38
PTPRA-201ENST00000216877 DHX16O60231 1041 aaKnown RBP17.41■□□□□ 0.38
PTPRA-201ENST00000216877 E2F4Q16254 413 aa17.41■□□□□ 0.38
PTPRA-201ENST00000216877 THUMPD2Q9BTF0 503 aaKnown RBP17.41■□□□□ 0.38
PTPRA-201ENST00000216877 NUTM2FA1L443 756 aa17.41■□□□□ 0.38
PTPRA-201ENST00000216877 CYP2C19P33261 490 aa17.41■□□□□ 0.38
PTPRA-201ENST00000216877 UBE2HP62256 183 aa17.41■□□□□ 0.38
PTPRA-201ENST00000216877 FERMT3Q86UX7 667 aa17.41■□□□□ 0.38
PTPRA-201ENST00000216877 CCAR2Q8N163 923 aaKnown RBP17.41■□□□□ 0.38
PTPRA-201ENST00000216877 CCDC34Q96HJ3 373 aa17.41■□□□□ 0.38
PTPRA-201ENST00000216877 MYO1CO00159 1063 aa17.41■□□□□ 0.38
PTPRA-201ENST00000216877 GOLGA6L19H0YKK7 550 aa17.4■□□□□ 0.38
PTPRA-201ENST00000216877 TPM4P67936 248 aa17.4■□□□□ 0.38
PTPRA-201ENST00000216877 ZSCAN25Q6NSZ9 544 aa17.4■□□□□ 0.38
PTPRA-201ENST00000216877 TMCO3Q6UWJ1 677 aa17.4■□□□□ 0.38
PTPRA-201ENST00000216877 CWC15Q9P013 229 aaKnown RBP17.4■□□□□ 0.38
PTPRA-201ENST00000216877 ANKRD36BQ8N2N9 1353 aa17.4■□□□□ 0.38
PTPRA-201ENST00000216877 ZSCAN26Q16670 478 aa17.4■□□□□ 0.38
PTPRA-201ENST00000216877 SMC3Q9UQE7 1217 aa17.4■□□□□ 0.38
PTPRA-201ENST00000216877 ANKRD65E5RJM6 399 aa17.39■□□□□ 0.38
PTPRA-201ENST00000216877 SLU7O95391 586 aaKnown RBP17.39■□□□□ 0.38
PTPRA-201ENST00000216877 TMPOP42166 694 aaKnown RBP17.39■□□□□ 0.38
PTPRA-201ENST00000216877 ARID5BQ14865 1188 aa17.39■□□□□ 0.38
PTPRA-201ENST00000216877 ARHGAP29Q52LW3 1261 aa17.39■□□□□ 0.38
PTPRA-201ENST00000216877 EFCC1Q9HA90 598 aa17.39■□□□□ 0.38
PTPRA-201ENST00000216877 DNM1Q05193 864 aaKnown RBP17.39■□□□□ 0.37
PTPRA-201ENST00000216877 USP27XA6NNY8 438 aa17.39■□□□□ 0.37
PTPRA-201ENST00000216877 ZBTB7BO15156 539 aaPredicted RBP17.39■□□□□ 0.37
PTPRA-201ENST00000216877 CACTINQ8WUQ7 758 aaKnown RBP17.39■□□□□ 0.37
PTPRA-201ENST00000216877 BANK1Q8NDB2 785 aa17.38■□□□□ 0.37
PTPRA-201ENST00000216877 SKILP12757 684 aa17.38■□□□□ 0.37
PTPRA-201ENST00000216877 ANO6Q4KMQ2 910 aa17.38■□□□□ 0.37
PTPRA-201ENST00000216877 SIRT2Q8IXJ6 389 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms