RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 AFF2P51816 1311 aa20.54■□□□□ 0.88
SNRPD3-201ENST00000215829 IRX6P78412 446 aaPredicted RBP20.54■□□□□ 0.88
SNRPD3-201ENST00000215829 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.54■□□□□ 0.88
SNRPD3-201ENST00000215829 PLIN1O60240 522 aa20.53■□□□□ 0.88
SNRPD3-201ENST00000215829 KRT24Q2M2I5 525 aa20.53■□□□□ 0.88
SNRPD3-201ENST00000215829 ALDH1L2Q3SY69 923 aa20.53■□□□□ 0.88
SNRPD3-201ENST00000215829 NFATC2IPQ8NCF5 419 aa20.53■□□□□ 0.88
SNRPD3-201ENST00000215829 MRC1P22897 1456 aa20.53■□□□□ 0.88
SNRPD3-201ENST00000215829 KDM3BQ7LBC6 1761 aa20.53■□□□□ 0.88
SNRPD3-201ENST00000215829 ERVV-2B6SEH9 535 aa20.52■□□□□ 0.88
SNRPD3-201ENST00000215829 SSH1Q8WYL5 1049 aa20.52■□□□□ 0.88
SNRPD3-201ENST00000215829 TNS2Q63HR2 1409 aa20.52■□□□□ 0.88
SNRPD3-201ENST00000215829 DDB1Q16531 1140 aa20.51■□□□□ 0.87
SNRPD3-201ENST00000215829 FBXO41Q8TF61 875 aa20.51■□□□□ 0.87
SNRPD3-201ENST00000215829 BCL2L13Q9BXK5 485 aa20.51■□□□□ 0.87
SNRPD3-201ENST00000215829 CABP4P57796 275 aa20.51■□□□□ 0.87
SNRPD3-201ENST00000215829 SMC4Q9NTJ3 1288 aa20.51■□□□□ 0.87
SNRPD3-201ENST00000215829 EIF4A1P60842 406 aaKnown RBP20.5■□□□□ 0.87
SNRPD3-201ENST00000215829 SOS1Q07889 1333 aaPredicted RBP20.49■□□□□ 0.87
SNRPD3-201ENST00000215829 KCNQ3O43525 872 aa20.49■□□□□ 0.87
SNRPD3-201ENST00000215829 FAM98CQ17RN3 349 aaKnown RBP20.49■□□□□ 0.87
SNRPD3-201ENST00000215829 BRPF1P55201 1214 aaPredicted RBP20.49■□□□□ 0.87
SNRPD3-201ENST00000215829 TRPC5Q9UL62 973 aaPredicted RBP20.49■□□□□ 0.87
SNRPD3-201ENST00000215829 ERICH6BQ5W0A0 696 aa20.48■□□□□ 0.87
SNRPD3-201ENST00000215829 GJD4Q96KN9 370 aaPredicted RBP20.48■□□□□ 0.87
SNRPD3-201ENST00000215829 ATRNO75882 1429 aa20.48■□□□□ 0.87
SNRPD3-201ENST00000215829 ZNF790Q6PG37 636 aa20.47■□□□□ 0.87
SNRPD3-201ENST00000215829 FRAT1Q92837 279 aaPredicted RBP20.46■□□□□ 0.87
SNRPD3-201ENST00000215829 MRPL50Q8N5N7 158 aaKnown RBP20.46■□□□□ 0.87
SNRPD3-201ENST00000215829 HOXB7P09629 217 aa20.45■□□□□ 0.86
SNRPD3-201ENST00000215829 CANXP27824 592 aaKnown RBP20.45■□□□□ 0.86
SNRPD3-201ENST00000215829 SLC39A6Q13433 755 aa20.45■□□□□ 0.86
SNRPD3-201ENST00000215829 TOGARAM1Q9Y4F4 1720 aa20.45■□□□□ 0.86
SNRPD3-201ENST00000215829 C20orf194Q5TEA3 1177 aa20.44■□□□□ 0.86
SNRPD3-201ENST00000215829 HEG1Q9ULI3 1381 aa20.44■□□□□ 0.86
SNRPD3-201ENST00000215829 GLI3P10071 1580 aa20.44■□□□□ 0.86
SNRPD3-201ENST00000215829 MARCH10Q8NA82 808 aaPredicted RBP20.44■□□□□ 0.86
SNRPD3-201ENST00000215829 QTRT2Q9H974 415 aaKnown RBP20.44■□□□□ 0.86
SNRPD3-201ENST00000215829 NOB1Q9ULX3 412 aaKnown RBP20.44■□□□□ 0.86
SNRPD3-201ENST00000215829 KIF16BQ96L93 1317 aa20.43■□□□□ 0.86
SNRPD3-201ENST00000215829 TCERG1O14776 1098 aaKnown RBP20.43■□□□□ 0.86
SNRPD3-201ENST00000215829 PDE3AQ14432 1141 aa20.43■□□□□ 0.86
SNRPD3-201ENST00000215829 ZKSCAN2Q63HK3 967 aa20.43■□□□□ 0.86
SNRPD3-201ENST00000215829 IPO8O15397 1037 aaKnown RBP20.42■□□□□ 0.86
SNRPD3-201ENST00000215829 ONECUT3O60422 494 aaPredicted RBP20.42■□□□□ 0.86
SNRPD3-201ENST00000215829 TTC5Q8N0Z6 440 aa20.42■□□□□ 0.86
SNRPD3-201ENST00000215829 TMOD3Q9NYL9 352 aa20.42■□□□□ 0.86
SNRPD3-201ENST00000215829 GIGYF1O75420 1035 aaPredicted RBP20.41■□□□□ 0.86
SNRPD3-201ENST00000215829 CCDC30Q5VVM6 783 aa20.41■□□□□ 0.86
SNRPD3-201ENST00000215829 CHMP4AQ9BY43 222 aa20.41■□□□□ 0.86
SNRPD3-201ENST00000215829 THSD7AQ9UPZ6 1657 aa20.41■□□□□ 0.86
SNRPD3-201ENST00000215829 ARHGAP45Q92619 1136 aa20.4■□□□□ 0.86
SNRPD3-201ENST00000215829 ITGB4P16144 1822 aa20.39■□□□□ 0.86
SNRPD3-201ENST00000215829 A0A0G2JS52 829 aa20.39■□□□□ 0.86
SNRPD3-201ENST00000215829 MYT1Q01538 1121 aa20.39■□□□□ 0.86
SNRPD3-201ENST00000215829 ATF7IPQ6VMQ6 1270 aa20.39■□□□□ 0.86
SNRPD3-201ENST00000215829 PIGBQ92521 554 aa20.39■□□□□ 0.86
SNRPD3-201ENST00000215829 ZNF496Q96IT1 587 aaPredicted RBP20.39■□□□□ 0.86
SNRPD3-201ENST00000215829 SLC4A2P04920 1241 aa20.39■□□□□ 0.85
SNRPD3-201ENST00000215829 MS4A1P11836 297 aa20.39■□□□□ 0.85
SNRPD3-201ENST00000215829 HDGFL1Q5TGJ6 251 aa20.39■□□□□ 0.85
SNRPD3-201ENST00000215829 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.85
SNRPD3-201ENST00000215829 CRBNQ96SW2 442 aa20.39■□□□□ 0.85
SNRPD3-201ENST00000215829 STK31Q9BXU1 1019 aa20.39■□□□□ 0.85
SNRPD3-201ENST00000215829 TRIM27P14373 513 aa20.38■□□□□ 0.85
SNRPD3-201ENST00000215829 ZNF772Q68DY9 489 aaPredicted RBP20.38■□□□□ 0.85
SNRPD3-201ENST00000215829 EXOC6Q8TAG9 804 aa20.38■□□□□ 0.85
SNRPD3-201ENST00000215829 PAPPAQ13219 1627 aa20.37■□□□□ 0.85
SNRPD3-201ENST00000215829 BCL9O00512 1426 aa20.37■□□□□ 0.85
SNRPD3-201ENST00000215829 EIF2S2P20042 333 aaKnown RBP20.36■□□□□ 0.85
SNRPD3-201ENST00000215829 PRIM1P49642 420 aaKnown RBP20.36■□□□□ 0.85
SNRPD3-201ENST00000215829 PANK1Q8TE04 598 aa20.36■□□□□ 0.85
SNRPD3-201ENST00000215829 NECTIN2Q92692 538 aa20.36■□□□□ 0.85
SNRPD3-201ENST00000215829 TNNQ9UQP3 1299 aa20.36■□□□□ 0.85
SNRPD3-201ENST00000215829 CACNA1FO60840 1977 aa20.36■□□□□ 0.85
SNRPD3-201ENST00000215829 DOT1LQ8TEK3 1739 aa20.36■□□□□ 0.85
SNRPD3-201ENST00000215829 KAT6BQ8WYB5 2073 aa20.36■□□□□ 0.85
SNRPD3-201ENST00000215829 SNRPA1P09661 255 aaKnown RBP20.36■□□□□ 0.85
SNRPD3-201ENST00000215829 DZIP1LQ8IYY4 767 aaKnown RBP20.36■□□□□ 0.85
SNRPD3-201ENST00000215829 UBR2Q8IWV8 1755 aa20.36■□□□□ 0.85
SNRPD3-201ENST00000215829 PRAMEF22A3QJZ6 481 aa20.35■□□□□ 0.85
SNRPD3-201ENST00000215829 RLBP1P12271 317 aa20.35■□□□□ 0.85
SNRPD3-201ENST00000215829 CLUAP1Q96AJ1 413 aa20.35■□□□□ 0.85
SNRPD3-201ENST00000215829 FTSJ3Q8IY81 847 aaKnown RBP20.34■□□□□ 0.85
SNRPD3-201ENST00000215829 SEPT12Q8IYM1 358 aa20.34■□□□□ 0.85
SNRPD3-201ENST00000215829 SYTL4Q96C24 671 aaPredicted RBP20.34■□□□□ 0.85
SNRPD3-201ENST00000215829 API5Q9BZZ5 524 aaKnown RBP20.34■□□□□ 0.85
SNRPD3-201ENST00000215829 ATG3Q9NT62 314 aa20.34■□□□□ 0.85
SNRPD3-201ENST00000215829 PPP4R2Q9NY27 417 aa20.34■□□□□ 0.85
SNRPD3-201ENST00000215829 ASAP1Q9ULH1 1129 aa20.34■□□□□ 0.85
SNRPD3-201ENST00000215829 PTPRCP08575 1304 aa20.34■□□□□ 0.85
SNRPD3-201ENST00000215829 KCPQ6ZWJ8 1503 aa20.33■□□□□ 0.85
SNRPD3-201ENST00000215829 ACSBG1Q96GR2 724 aa20.32■□□□□ 0.84
SNRPD3-201ENST00000215829 COG6Q9Y2V7 657 aa20.32■□□□□ 0.84
SNRPD3-201ENST00000215829 C5P01031 1676 aa20.32■□□□□ 0.84
SNRPD3-201ENST00000215829 G2E3Q7L622 706 aa20.31■□□□□ 0.84
SNRPD3-201ENST00000215829 CHPF2Q9P2E5 772 aa20.31■□□□□ 0.84
SNRPD3-201ENST00000215829 DBF4Q9UBU7 674 aaPredicted RBP20.31■□□□□ 0.84
SNRPD3-201ENST00000215829 PTCD1O75127 700 aaKnown RBP20.31■□□□□ 0.84
SNRPD3-201ENST00000215829 USP16Q9Y5T5 823 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms