RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Becn1O88597 448 aa15.89■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Sf3b2Q3UJB0 878 aaKnown RBP15.89■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 ShprhQ7TPQ3 1674 aa15.89■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Igflr1Q3U4N7 345 aa15.89■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Astn2Q80Z10 1352 aa15.88■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Pik3r4Q8VD65 1358 aa15.88■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Cavin2Q63918 418 aaKnown RBP15.88■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Gjb2Q00977 226 aa15.87■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Irf9Q61179 399 aa15.87■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 ApobrQ8VBT6 942 aa15.87■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Eif3bQ8JZQ9 803 aaKnown RBP15.87■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Cnnm3Q32NY4 713 aa15.87■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 GckrQ91X44 587 aa15.87■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Rasa1E9PYG6 1038 aa15.86■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Lmbr1lQ9D1E5 489 aa15.86■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Syce3B5KM66 88 aa15.86■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Znf692Q3U381 531 aa15.86■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Prune1Q8BIW1 454 aa15.86■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Echdc1Q9D9V3 322 aa15.86■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Iqgap1Q9JKF1 1657 aaKnown RBP15.85■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Samd1D3YXK1 519 aa15.85■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Anapc15-psA0A140T8L6 141 aa15.85■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Nucb1Q02819 459 aaKnown RBP15.85■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 BccipQ9CWI3 316 aa15.85■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 PhaxQ9JJT9 385 aaKnown RBP15.85■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Rims1Q99NE5 1463 aa15.85■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Gm10093D3YYI8 482 aa15.85■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Hdac1O09106 482 aaKnown RBP15.85■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Dmrtc1Q9D9R7 182 aa15.85■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Zbtb22Q9Z0G7 638 aa15.85■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Eif3aP23116 1344 aaKnown RBP15.85■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Nsfl1cQ9CZ44 370 aaKnown RBP15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 PzpQ61838 1495 aa15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 CrcpO35427 148 aa15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Atp8b2P98199 1209 aa15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Flad1Q8R123 492 aa15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Amotl1Q9D4H4 968 aa15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Atg4a-psA0A0G2JFS9 396 aa15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Abl1P00520 1123 aa15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Atg4aQ8C9S8 396 aa15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Hnrnpul1Q8VDM6 859 aaKnown RBP15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Adgrl1Q80TR1 1466 aa15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Strn4P58404 760 aa15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Bag4Q8CI61 457 aa15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Cchcr1Q8K2I2 770 aa15.84■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Uggt1Q6P5E4 1551 aa15.83■□□□□ 0.13
Pdgfra-205ENSMUST00000201711 Cct4P80315 539 aaKnown RBP15.83■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Edc3Q8K2D3 508 aaKnown RBP15.83■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 CenppQ9CZ92 286 aa15.83■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Tpm2P58774 284 aa15.83■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Prkab2Q6PAM0 271 aa15.83■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Slain2Q8CI08 581 aa15.83■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 OptnQ8K3K8 584 aa15.83■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 VeztQ3ZK22 780 aa15.83■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Chd1P40201 1711 aa15.82■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Aldh8a1Q8BH00 487 aa15.82■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Robo2Q7TPD3 1470 aa15.82■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Slx4ipQ9D7Y9 413 aa15.82■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Gdpd2Q9ESM6 539 aa15.82■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 RestQ8VIG1 1082 aa15.82■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Bag3Q9JLV1 577 aaKnown RBP15.82■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Psma5Q9Z2U1 241 aaKnown RBP15.82■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Eva1cP58659 440 aa15.81■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Atp10aO54827 1508 aa15.81■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Plxnc1Q9QZC2 1574 aa15.81■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Wdr78E9PYY5 807 aa15.81■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Glipr1l2Q9CQ35 332 aa15.81■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Irgm2A0A140LIF8 407 aa15.81■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Ercc3P49135 783 aa15.81■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 FancaQ9JL70 1439 aa15.81■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Hecw1Q8K4P8 1604 aa15.8■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Tpx2A2APB8 745 aaKnown RBP15.8■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Ier5O89113 308 aa15.8■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Samm50Q8BGH2 469 aa15.8■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Zbtb3Q91X45 518 aa15.8■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Kidins220E9Q9B7 1793 aa15.8■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Mcmdc2E9Q956 681 aa15.8■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Gnl3lQ6PGG6 577 aaKnown RBP15.8■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 MsnP26041 577 aaKnown RBP15.79■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Dnajc5P60904 198 aa15.79■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Ddx46Q569Z5 1032 aaKnown RBP15.79■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Plekhd1B2RPU2 505 aa15.79■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Tnnt2P50752 301 aa15.79■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Dnajc2P54103 621 aaKnown RBP15.79■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Cplx1P63040 134 aa15.79■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 LratQ9JI60 231 aa15.79■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Myom2Q14BI5 1463 aa15.79■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Bloc1s4Q8VED2 215 aa15.79■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Polr3dQ91WD1 398 aa15.79■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Txnrd1Q9JMH6 613 aa15.79■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Grm8P47743 908 aa15.78■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 EappQ5BU09 281 aa15.78■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Arhgef1Q61210 920 aaKnown RBP15.78■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Ppp6r3Q922D4 844 aa15.78■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Tbc1d7Q9D0K0 293 aa15.78■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 ThemisQ8BGW0 636 aa15.78■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 DmtnQ9WV69 405 aa15.78■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Knl1Q66JQ7 1612 aa15.78■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Dhx16G3X8X0 1044 aaKnown RBP15.78■□□□□ 0.12
Pdgfra-205ENSMUST00000201711 Aldh1l2Q8K009 923 aa15.78■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 99 ms