RNA–Protein interactions for RNA: ENSMUST00000200043.4

Pdlim5-212, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-212ENSMUST00000200043 Kdm2bQ6P1G2 1309 aa20.24■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Col4a1P02463 1669 aa20.23■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Col1a2Q01149 1372 aa20.22■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Ralbp1Q62172 648 aa20.22■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Ric1Q69ZJ7 1422 aa20.22■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Gnai1B2RSH2 354 aa20.21■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Cyp2d12Q8BVD2 504 aa20.21■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Gnai3Q9DC51 354 aa20.21■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Ubr3Q5U430 1889 aa20.21■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 CoblQ5NBX1 1337 aaKnown RBP20.21■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Igsf1Q7TQA1 1317 aa20.21■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Tnnt1O88346 262 aa20.21■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Eif4a1P60843 406 aaKnown RBP20.21■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Foxp4Q9DBY0 795 aaKnown RBP20.21■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Ankrd50F7BE84 1390 aa20.2■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 1700019A02RikA0A087WPV9 146 aa20.2■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Fam198bQ3UPI1 517 aa20.2■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Miga2Q8BK03 593 aa20.2■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Adcy9P51830 1353 aa20.19■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Syde2E9PUP1 1314 aa20.19■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Smarcc1P97496 1104 aa20.19■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Zfp444Q3TDV8 331 aaKnown RBP20.19■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Ttc21aQ8C0S4 1314 aa20.18■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Gas2l2Q5SSG4 860 aa20.18■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Clcn1Q64347 994 aa20.18■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Msh6P54276 1358 aaKnown RBP20.18■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Gm13023A2A8N2 498 aa20.17■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Cnnm1Q0GA42 951 aa20.17■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Ccdc30Q8BVF4 654 aa20.17■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Usp16Q99LG0 825 aa20.17■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Col11a2Q64739 1736 aa20.17■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Iqsec3Q3TES0 1195 aa20.17■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Chpf2Q3UU43 768 aa20.17■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 TefQ9JLC6 301 aa20.17■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Rbm25B2RY56 838 aaKnown RBP20.16■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Kif23E9Q5G3 953 aa20.15■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Ccdc85cE9Q6B2 420 aa20.15■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Bcl2l13P59017 434 aa20.15■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 BcorQ8CGN4 1759 aa20.15■□□□□ 0.82
Pdlim5-212ENSMUST00000200043 Pde4dQ01063 747 aa20.14■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Prkab2Q6PAM0 271 aa20.14■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Pdia6Q922R8 440 aaKnown RBP20.14■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Hmgb2P30681 210 aaKnown RBP20.13■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Pcgf6Q99NA9 353 aa20.13■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Fkbp4P30416 458 aa20.12■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Ofd1Q80Z25 1017 aa20.12■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Flad1Q8R123 492 aa20.12■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 GckrQ91X44 587 aa20.12■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 MeiocA2AG06 965 aa20.12■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Ddx60E9PZQ1 1711 aa20.12■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Q3TQI7 289 aaKnown RBP20.11■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Ksr2Q3UVC0 959 aa20.11■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Slfnl1Q8BHW9 410 aa20.11■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Mylk2Q8VCR8 613 aa20.11■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Zbtb1Q91VL9 713 aa20.11■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Akt1s1Q9D1F4 257 aa20.11■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Sipa1l3G3X9J0 1776 aa20.11■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 MetP16056 1379 aa20.1■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Cypt1Q8CH20 168 aa20.1■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Taf7Q9R1C0 341 aa20.1■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Atf5O70191 283 aa20.09■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Gm12185Q5NCB2 835 aa20.09■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Lama4P97927 1816 aa20.09■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 DiexfQ8BTT6 772 aaKnown RBP20.08■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Slc39a6Q8C145 765 aa20.08■□□□□ 0.81
Pdlim5-212ENSMUST00000200043 Nop58Q6DFW4 536 aaKnown RBP20.07■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Nip7Q9CXK8 180 aaKnown RBP20.07■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Plch1Q4KWH5 1682 aa20.06■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Msl1Q6PDM1 616 aa20.06■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Trim26Q99PN3 545 aa20.06■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 NudcO35685 332 aaKnown RBP20.05■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 CastP51125 788 aa20.05■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Jdp2P97875 163 aa20.05■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 SympkQ80X82 1284 aa20.05■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Tmem119Q8R138 280 aa20.05■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 PsdQ5DTT2 1024 aa20.04■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Sumf1Q8R0F3 372 aa20.04■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Zswim8Q3UHH1 1832 aaKnown RBP20.04■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 AtrnQ9WU60 1428 aa20.04■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 NppbP40753 121 aa20.03■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Cers3Q1A3B0 383 aa20.03■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 RtcbQ99LF4 505 aaKnown RBP20.03■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Gigyf1Q99MR1 1044 aaKnown RBP20.03■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Spata31d1bE9QA57 1361 aa20.02■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Gm6268A2A3U9 297 aa20.02■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Igfbp6P47880 238 aa20.02■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Lrrc43Q3V0L5 667 aa20.02■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Anks4bQ8K3X6 423 aa20.02■□□□□ 0.8
Pdlim5-212ENSMUST00000200043 Lrp5Q91VN0 1614 aa20.01■□□□□ 0.79
Pdlim5-212ENSMUST00000200043 Vamp4O70480 141 aa20.01■□□□□ 0.79
Pdlim5-212ENSMUST00000200043 PsapQ61207 557 aaKnown RBP20.01■□□□□ 0.79
Pdlim5-212ENSMUST00000200043 Sned1Q70E20 1403 aa20.01■□□□□ 0.79
Pdlim5-212ENSMUST00000200043 Strn4P58404 760 aa20■□□□□ 0.79
Pdlim5-212ENSMUST00000200043 Ccar1Q8CH18 1146 aaKnown RBP20■□□□□ 0.79
Pdlim5-212ENSMUST00000200043 Chrna2Q91X60 512 aa20■□□□□ 0.79
Pdlim5-212ENSMUST00000200043 Togaram1Q6A070 1776 aaKnown RBP20■□□□□ 0.79
Pdlim5-212ENSMUST00000200043 Polr3glQ8R0C0 218 aa20■□□□□ 0.79
Pdlim5-212ENSMUST00000200043 Atp1b3P97370 278 aa19.99■□□□□ 0.79
Pdlim5-212ENSMUST00000200043 HmcesQ8R1M0 353 aaKnown RBP19.99■□□□□ 0.79
Pdlim5-212ENSMUST00000200043 Emilin1Q99K41 1017 aa19.99■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms