RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 E4f1Q8CCE9 783 aa17.38■□□□□ 0.37
Syn1-202ENSMUST00000115345 Paxbp1P58501 919 aa17.37■□□□□ 0.37
Syn1-202ENSMUST00000115345 Stk11Q9WTK7 436 aa17.37■□□□□ 0.37
Syn1-202ENSMUST00000115345 Bloc1s4Q8VED2 215 aa17.37■□□□□ 0.37
Syn1-202ENSMUST00000115345 Apbb1Q9QXJ1 710 aa17.36■□□□□ 0.37
Syn1-202ENSMUST00000115345 Hfm1D3Z4R1 1434 aa17.36■□□□□ 0.37
Syn1-202ENSMUST00000115345 Ylpm1Q9R0I7 1386 aaKnown RBP17.36■□□□□ 0.37
Syn1-202ENSMUST00000115345 Kif16bB1AVY7 1312 aa17.36■□□□□ 0.37
Syn1-202ENSMUST00000115345 Oas2E9Q9A9 742 aa17.36■□□□□ 0.37
Syn1-202ENSMUST00000115345 Prex1Q69ZK0 1650 aa17.36■□□□□ 0.37
Syn1-202ENSMUST00000115345 Ecm2Q5FW85 670 aa17.36■□□□□ 0.37
Syn1-202ENSMUST00000115345 Spag9Q58A65 1321 aaKnown RBP17.35■□□□□ 0.37
Syn1-202ENSMUST00000115345 Prpf38aQ4FK66 312 aaKnown RBP17.35■□□□□ 0.37
Syn1-202ENSMUST00000115345 Klhl23Q6GQU2 558 aa17.35■□□□□ 0.37
Syn1-202ENSMUST00000115345 CenpjQ569L8 1344 aa17.35■□□□□ 0.37
Syn1-202ENSMUST00000115345 Mcm6P97311 821 aa17.35■□□□□ 0.37
Syn1-202ENSMUST00000115345 Znf653Q6YND2 615 aa17.35■□□□□ 0.37
Syn1-202ENSMUST00000115345 Olfml1Q8BSH2 233 aa17.35■□□□□ 0.37
Syn1-202ENSMUST00000115345 Ttc41Q692V3 1318 aa17.35■□□□□ 0.37
Syn1-202ENSMUST00000115345 Tpd52l1O54818 204 aa17.34■□□□□ 0.37
Syn1-202ENSMUST00000115345 Naif1Q6PFD7 327 aa17.34■□□□□ 0.37
Syn1-202ENSMUST00000115345 Os9Q8K2C7 672 aa17.34■□□□□ 0.37
Syn1-202ENSMUST00000115345 ShprhQ7TPQ3 1674 aa17.34■□□□□ 0.37
Syn1-202ENSMUST00000115345 EzrP26040 586 aaKnown RBP17.34■□□□□ 0.37
Syn1-202ENSMUST00000115345 Tbc1d1Q60949 1255 aa17.34■□□□□ 0.37
Syn1-202ENSMUST00000115345 Chd2E9PZM4 1827 aaKnown RBP17.34■□□□□ 0.37
Syn1-202ENSMUST00000115345 RargP18911 458 aaKnown RBP17.34■□□□□ 0.37
Syn1-202ENSMUST00000115345 Vps33aQ9D2N9 598 aa17.34■□□□□ 0.37
Syn1-202ENSMUST00000115345 Ppp1r12aQ9DBR7 1029 aaKnown RBP17.34■□□□□ 0.37
Syn1-202ENSMUST00000115345 IqcgQ80W32 419 aa17.33■□□□□ 0.37
Syn1-202ENSMUST00000115345 Mphosph10Q810V0 681 aaKnown RBP17.33■□□□□ 0.37
Syn1-202ENSMUST00000115345 Gucy2cQ3UWA6 1072 aa17.33■□□□□ 0.36
Syn1-202ENSMUST00000115345 PzpQ61838 1495 aa17.33■□□□□ 0.36
Syn1-202ENSMUST00000115345 Vps8Q0P5W1 1427 aa17.32■□□□□ 0.36
Syn1-202ENSMUST00000115345 Ssh2Q5SW75 1423 aa17.32■□□□□ 0.36
Syn1-202ENSMUST00000115345 Rad50P70388 1312 aa17.32■□□□□ 0.36
Syn1-202ENSMUST00000115345 Robo2Q7TPD3 1470 aa17.32■□□□□ 0.36
Syn1-202ENSMUST00000115345 CastP51125 788 aa17.32■□□□□ 0.36
Syn1-202ENSMUST00000115345 Ccdc73Q8CDM4 1066 aa17.32■□□□□ 0.36
Syn1-202ENSMUST00000115345 Kdm5aQ3UXZ9 1690 aa17.32■□□□□ 0.36
Syn1-202ENSMUST00000115345 Tmem165P52875 323 aa17.32■□□□□ 0.36
Syn1-202ENSMUST00000115345 Znf568E9PYI1 671 aa17.31■□□□□ 0.36
Syn1-202ENSMUST00000115345 Slc5a4aQ9ET37 656 aa17.31■□□□□ 0.36
Syn1-202ENSMUST00000115345 AmotQ8VHG2 1126 aa17.31■□□□□ 0.36
Syn1-202ENSMUST00000115345 Mx2Q9WVP9 655 aa17.31■□□□□ 0.36
Syn1-202ENSMUST00000115345 Kif3cO35066 796 aa17.3■□□□□ 0.36
Syn1-202ENSMUST00000115345 Rsph10bE9PYQ0 876 aa17.3■□□□□ 0.36
Syn1-202ENSMUST00000115345 Q9D1Z2 194 aa17.3■□□□□ 0.36
Syn1-202ENSMUST00000115345 Asxl1P59598 1514 aa17.29■□□□□ 0.36
Syn1-202ENSMUST00000115345 Smarce1O54941 411 aaKnown RBP17.29■□□□□ 0.36
Syn1-202ENSMUST00000115345 RdxP26043 583 aaKnown RBP17.29■□□□□ 0.36
Syn1-202ENSMUST00000115345 Mcm5P49718 733 aa17.29■□□□□ 0.36
Syn1-202ENSMUST00000115345 3425401B19RikD3Z1D3 1412 aa17.29■□□□□ 0.36
Syn1-202ENSMUST00000115345 Gm6588E9Q3K0 461 aa17.29■□□□□ 0.36
Syn1-202ENSMUST00000115345 Zscan21Q07231 555 aa17.29■□□□□ 0.36
Syn1-202ENSMUST00000115345 Frmd3Q8BHD4 595 aa17.29■□□□□ 0.36
Syn1-202ENSMUST00000115345 Zc3h13E9Q784 1729 aaKnown RBP17.29■□□□□ 0.36
Syn1-202ENSMUST00000115345 Ccdc112A0AUP1 442 aa17.28■□□□□ 0.36
Syn1-202ENSMUST00000115345 Hmgb1P63158 215 aaKnown RBP17.28■□□□□ 0.36
Syn1-202ENSMUST00000115345 Dmrtc1Q9D9R7 182 aa17.28■□□□□ 0.36
Syn1-202ENSMUST00000115345 Tpm1P58771 284 aa17.28■□□□□ 0.36
Syn1-202ENSMUST00000115345 Rasa1E9PYG6 1038 aa17.27■□□□□ 0.36
Syn1-202ENSMUST00000115345 Trak1Q6PD31 939 aa17.27■□□□□ 0.36
Syn1-202ENSMUST00000115345 Cpsf1Q9EPU4 1441 aaKnown RBP17.27■□□□□ 0.36
Syn1-202ENSMUST00000115345 Iqgap1Q9JKF1 1657 aaKnown RBP17.27■□□□□ 0.36
Syn1-202ENSMUST00000115345 Cspp1B2RX88 1205 aa17.27■□□□□ 0.36
Syn1-202ENSMUST00000115345 Zscan29E9Q5B4 869 aa17.27■□□□□ 0.36
Syn1-202ENSMUST00000115345 Hspa1lP16627 641 aa17.27■□□□□ 0.36
Syn1-202ENSMUST00000115345 Rapgef3Q8VCC8 918 aa17.27■□□□□ 0.36
Syn1-202ENSMUST00000115345 Tbc1d8Q9Z1A9 1134 aa17.27■□□□□ 0.36
Syn1-202ENSMUST00000115345 Adcy5P84309 1262 aa17.27■□□□□ 0.35
Syn1-202ENSMUST00000115345 Adgrb3Q80ZF8 1522 aa17.26■□□□□ 0.35
Syn1-202ENSMUST00000115345 Gtpbp10Q8K013 366 aa17.26■□□□□ 0.35
Syn1-202ENSMUST00000115345 Kif1bQ60575 1816 aaKnown RBP17.26■□□□□ 0.35
Syn1-202ENSMUST00000115345 Plcb3P51432 1234 aaKnown RBP17.26■□□□□ 0.35
Syn1-202ENSMUST00000115345 Wwc1Q5SXA9 1104 aa17.26■□□□□ 0.35
Syn1-202ENSMUST00000115345 Ppp2r3dQ9Z176 491 aa17.26■□□□□ 0.35
Syn1-202ENSMUST00000115345 Akap12Q9WTQ5 1684 aa17.26■□□□□ 0.35
Syn1-202ENSMUST00000115345 Flad1Q8R123 492 aa17.25■□□□□ 0.35
Syn1-202ENSMUST00000115345 Kif4P33174 1231 aa17.25■□□□□ 0.35
Syn1-202ENSMUST00000115345 CgnP59242 1191 aa17.25■□□□□ 0.35
Syn1-202ENSMUST00000115345 Cabp1Q9JLK7 227 aa17.25■□□□□ 0.35
Syn1-202ENSMUST00000115345 Ms4a1P19437 291 aa17.25■□□□□ 0.35
Syn1-202ENSMUST00000115345 Lig3P97386 1015 aa17.25■□□□□ 0.35
Syn1-202ENSMUST00000115345 Atp11aP98197 1187 aa17.25■□□□□ 0.35
Syn1-202ENSMUST00000115345 GapdhsQ64467 440 aa17.25■□□□□ 0.35
Syn1-202ENSMUST00000115345 Tomm22Q9CPQ3 142 aa17.25■□□□□ 0.35
Syn1-202ENSMUST00000115345 Paip2Q9D6V8 124 aa17.25■□□□□ 0.35
Syn1-202ENSMUST00000115345 Tubgcp6G5E8P0 1769 aa17.25■□□□□ 0.35
Syn1-202ENSMUST00000115345 DroshaQ5HZJ0 1373 aaKnown RBP17.24■□□□□ 0.35
Syn1-202ENSMUST00000115345 Gnl3lQ6PGG6 577 aaKnown RBP17.24■□□□□ 0.35
Syn1-202ENSMUST00000115345 Ccdc155Q80VJ8 648 aa17.24■□□□□ 0.35
Syn1-202ENSMUST00000115345 Ccdc178Q8CDV0 866 aa17.24■□□□□ 0.35
Syn1-202ENSMUST00000115345 Nrxn3Q6P9K9 1571 aa17.24■□□□□ 0.35
Syn1-202ENSMUST00000115345 Cep126Q0VBV7 1103 aa17.24■□□□□ 0.35
Syn1-202ENSMUST00000115345 Rap1gap2Q5SVL6 712 aaKnown RBP17.23■□□□□ 0.35
Syn1-202ENSMUST00000115345 Adck5Q80V03 582 aa17.23■□□□□ 0.35
Syn1-202ENSMUST00000115345 Suds3Q8BR65 328 aa17.23■□□□□ 0.35
Syn1-202ENSMUST00000115345 Eif2b5Q8CHW4 717 aa17.23■□□□□ 0.35
Syn1-202ENSMUST00000115345 Tbc1d7Q9D0K0 293 aa17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms